RNA–Protein interactions for RNA: ENST00000514152.5

SH3D19-210, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SH3D19, Length 5,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-210ENST00000514152 VPS37DQ86XT2 251 aa8.28□□□□□ -1.08
SH3D19-210ENST00000514152 POTEDQ86YR6 584 aa8.28□□□□□ -1.08
SH3D19-210ENST00000514152 TNNQ9UQP3 1299 aa8.28□□□□□ -1.08
SH3D19-210ENST00000514152 ANKRD36BQ8N2N9 1353 aa8.28□□□□□ -1.08
SH3D19-210ENST00000514152 ZNF75DP51815 510 aa8.28□□□□□ -1.08
SH3D19-210ENST00000514152 KCNG4Q8TDN1 519 aa8.28□□□□□ -1.08
SH3D19-210ENST00000514152 NACAP1Q9BZK3 213 aa8.28□□□□□ -1.08
SH3D19-210ENST00000514152 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.28□□□□□ -1.08
SH3D19-210ENST00000514152 PLEKHO1Q53GL0 409 aaPredicted RBP8.28□□□□□ -1.08
SH3D19-210ENST00000514152 CCDC102BQ68D86 513 aa8.28□□□□□ -1.08
SH3D19-210ENST00000514152 MAATS1Q7Z4T9 603 aa8.28□□□□□ -1.08
SH3D19-210ENST00000514152 PLEKHM2Q8IWE5 1019 aa8.28□□□□□ -1.08
SH3D19-210ENST00000514152 CTAGE1Q96RT6 745 aa8.28□□□□□ -1.08
SH3D19-210ENST00000514152 DCTPP1Q9H773 170 aa8.28□□□□□ -1.08
SH3D19-210ENST00000514152 ECHDC1Q9NTX5 307 aa8.28□□□□□ -1.08
SH3D19-210ENST00000514152 FAM135AQ9P2D6 1515 aa8.28□□□□□ -1.08
SH3D19-210ENST00000514152 MSL1Q68DK7 614 aa8.27□□□□□ -1.08
SH3D19-210ENST00000514152 DRC1Q96MC2 740 aa8.27□□□□□ -1.08
SH3D19-210ENST00000514152 TMEM63CQ9P1W3 806 aa8.27□□□□□ -1.08
SH3D19-210ENST00000514152 MKRN1Q9UHC7 482 aaKnown RBP8.27□□□□□ -1.08
SH3D19-210ENST00000514152 UGGT2Q9NYU1 1516 aa8.27□□□□□ -1.08
SH3D19-210ENST00000514152 PPP2R3AQ06190 1150 aa8.27□□□□□ -1.09
SH3D19-210ENST00000514152 CCDC121Q6ZUS5 278 aa8.27□□□□□ -1.09
SH3D19-210ENST00000514152 MRPL50Q8N5N7 158 aaKnown RBP8.27□□□□□ -1.09
SH3D19-210ENST00000514152 FAM76AQ8TAV0 307 aa8.27□□□□□ -1.09
SH3D19-210ENST00000514152 MYCBPQ99417 103 aaPredicted RBP8.27□□□□□ -1.09
SH3D19-210ENST00000514152 MBIPQ9NS73 344 aa8.27□□□□□ -1.09
SH3D19-210ENST00000514152 CFAP43Q8NDM7 1665 aa8.27□□□□□ -1.09
SH3D19-210ENST00000514152 ARHGEF12Q9NZN5 1544 aa8.27□□□□□ -1.09
SH3D19-210ENST00000514152 TUBB2AQ13885 445 aa8.27□□□□□ -1.09
SH3D19-210ENST00000514152 TUBB2BQ9BVA1 445 aa8.27□□□□□ -1.09
SH3D19-210ENST00000514152 PRAG1Q86YV5 1406 aa8.27□□□□□ -1.09
SH3D19-210ENST00000514152 GTF2E1P29083 439 aaPredicted RBP8.27□□□□□ -1.09
SH3D19-210ENST00000514152 ZFYVE27Q5T4F4 411 aa8.27□□□□□ -1.09
SH3D19-210ENST00000514152 NECAB1Q8N987 351 aa8.27□□□□□ -1.09
SH3D19-210ENST00000514152 AFAP1L1Q8TED9 768 aa8.27□□□□□ -1.09
SH3D19-210ENST00000514152 NEK1Q96PY6 1258 aa8.27□□□□□ -1.09
SH3D19-210ENST00000514152 ANTXR1Q9H6X2 564 aa8.27□□□□□ -1.09
SH3D19-210ENST00000514152 JADE2Q9NQC1 790 aa8.27□□□□□ -1.09
SH3D19-210ENST00000514152 EIF2AK4Q9P2K8 1649 aaKnown RBP8.26□□□□□ -1.09
SH3D19-210ENST00000514152 A0A1B0GUA9 196 aa8.26□□□□□ -1.09
SH3D19-210ENST00000514152 NUP133Q8WUM0 1156 aa8.26□□□□□ -1.09
SH3D19-210ENST00000514152 TSC1Q92574 1164 aa8.26□□□□□ -1.09
SH3D19-210ENST00000514152 MRVI1Q9Y6F6 885 aa8.26□□□□□ -1.09
SH3D19-210ENST00000514152 RTL1A6NKG5 1358 aa8.26□□□□□ -1.09
SH3D19-210ENST00000514152 OAS2P29728 719 aaKnown RBP8.26□□□□□ -1.09
SH3D19-210ENST00000514152 SYKP43405 635 aa8.26□□□□□ -1.09
SH3D19-210ENST00000514152 TSHZ3Q63HK5 1081 aa8.26□□□□□ -1.09
SH3D19-210ENST00000514152 RSRC1Q96IZ7 334 aaKnown RBP8.26□□□□□ -1.09
SH3D19-210ENST00000514152 BOLA2Q9H3K6 86 aa8.26□□□□□ -1.09
SH3D19-210ENST00000514152 F6X3S4 739 aa8.26□□□□□ -1.09
SH3D19-210ENST00000514152 KRT18P05783 430 aaKnown RBP8.26□□□□□ -1.09
SH3D19-210ENST00000514152 AK2P54819 239 aa8.26□□□□□ -1.09
SH3D19-210ENST00000514152 ZSCAN26Q16670 478 aa8.26□□□□□ -1.09
SH3D19-210ENST00000514152 DNAJC21Q5F1R6 531 aaKnown RBP8.26□□□□□ -1.09
SH3D19-210ENST00000514152 CEP57Q86XR8 500 aa8.26□□□□□ -1.09
SH3D19-210ENST00000514152 IMPACTQ9P2X3 320 aa8.26□□□□□ -1.09
SH3D19-210ENST00000514152 RTEL1-TNFRSF6BF6WH68 1400 aa8.26□□□□□ -1.09
SH3D19-210ENST00000514152 HLTFQ14527 1009 aaKnown RBP eCLIP8.26□□□□□ -1.096e-7■□□□□ 8.6
SH3D19-210ENST00000514152 CCDC178Q5BJE1 867 aa8.26□□□□□ -1.09
SH3D19-210ENST00000514152 B4GALNT4Q76KP1 1039 aa8.26□□□□□ -1.09
SH3D19-210ENST00000514152 CCDC113Q9H0I3 377 aa8.26□□□□□ -1.09
SH3D19-210ENST00000514152 KIF14Q15058 1648 aa8.25□□□□□ -1.09
SH3D19-210ENST00000514152 MCM10Q7L590 875 aa8.25□□□□□ -1.09
SH3D19-210ENST00000514152 RAPGEF4Q8WZA2 1011 aa8.25□□□□□ -1.09
SH3D19-210ENST00000514152 IFNKQ9P0W0 207 aa8.25□□□□□ -1.09
SH3D19-210ENST00000514152 TCEAL9Q9UHQ7 104 aa8.25□□□□□ -1.09
SH3D19-210ENST00000514152 A6NNZ2 444 aa8.25□□□□□ -1.09
SH3D19-210ENST00000514152 CCT2P78371 535 aaKnown RBP8.25□□□□□ -1.09
SH3D19-210ENST00000514152 TUBB8Q3ZCM7 444 aa8.25□□□□□ -1.09
SH3D19-210ENST00000514152 CLSTN2Q9H4D0 955 aa8.25□□□□□ -1.09
SH3D19-210ENST00000514152 TCOF1Q13428 1488 aaKnown RBP8.25□□□□□ -1.09
SH3D19-210ENST00000514152 GOLGA8BA8MQT2 603 aa8.25□□□□□ -1.09
SH3D19-210ENST00000514152 ATRIPQ8WXE1 791 aa8.25□□□□□ -1.09
SH3D19-210ENST00000514152 PYM1Q9BRP8 204 aaKnown RBP8.25□□□□□ -1.09
SH3D19-210ENST00000514152 NSRP1Q9H0G5 558 aaKnown RBP8.25□□□□□ -1.09
SH3D19-210ENST00000514152 RBM28Q9NW13 759 aaKnown RBP8.25□□□□□ -1.09
SH3D19-210ENST00000514152 PER1O15534 1290 aaPredicted RBP8.25□□□□□ -1.09
SH3D19-210ENST00000514152 PHACTR2O75167 634 aa8.25□□□□□ -1.09
SH3D19-210ENST00000514152 NLRP6P59044 892 aa8.25□□□□□ -1.09
SH3D19-210ENST00000514152 FKBP4Q02790 459 aaKnown RBP eCLIP8.25□□□□□ -1.09
SH3D19-210ENST00000514152 RRS1Q15050 365 aaKnown RBP8.25□□□□□ -1.09
SH3D19-210ENST00000514152 SPECC1Q5M775 1068 aa8.25□□□□□ -1.09
SH3D19-210ENST00000514152 CACNA2D4Q7Z3S7 1137 aa8.25□□□□□ -1.09
SH3D19-210ENST00000514152 C16orf71Q8IYS4 520 aaPredicted RBP8.25□□□□□ -1.09
SH3D19-210ENST00000514152 CCDC43Q96MW1 224 aaKnown RBP8.25□□□□□ -1.09
SH3D19-210ENST00000514152 CBX8Q9HC52 389 aa8.25□□□□□ -1.09
SH3D19-210ENST00000514152 COL17A1Q9UMD9 1497 aaPredicted RBP8.24□□□□□ -1.09
SH3D19-210ENST00000514152 GNAT3A8MTJ3 354 aa8.24□□□□□ -1.09
SH3D19-210ENST00000514152 FGFR1OPO95684 399 aaKnown RBP8.24□□□□□ -1.09
SH3D19-210ENST00000514152 ISM2Q6H9L7 571 aa8.24□□□□□ -1.09
SH3D19-210ENST00000514152 UBAC1Q9BSL1 405 aa8.24□□□□□ -1.09
SH3D19-210ENST00000514152 MAP2K2P36507 400 aa8.24□□□□□ -1.09
SH3D19-210ENST00000514152 FLIIQ13045 1269 aa8.24□□□□□ -1.09
SH3D19-210ENST00000514152 ATL3Q6DD88 541 aa8.24□□□□□ -1.09
SH3D19-210ENST00000514152 CCDC114Q96M63 670 aa8.24□□□□□ -1.09
SH3D19-210ENST00000514152 RNF216Q9NWF9 866 aaPredicted RBP8.24□□□□□ -1.09
SH3D19-210ENST00000514152 PUF60Q9UHX1 559 aaKnown RBP8.24□□□□□ -1.09
SH3D19-210ENST00000514152 IQGAP2Q13576 1575 aa8.24□□□□□ -1.09
SH3D19-210ENST00000514152 CCDC196A0A1B0GTZ2 297 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms