RNA–Protein interactions for RNA: ENST00000513418.1

SMAD5-208, Transcript of SMAD family member 5, humanhuman

TSL 5

Gene SMAD5, Length 523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-208ENST00000513418 RGL4Q8IZJ4 473 aa5.27□□□□□ -1.57
SMAD5-208ENST00000513418 VWA5B2Q8N398 1253 aa5.27□□□□□ -1.57
SMAD5-208ENST00000513418 CCER1Q8TC90 406 aaPredicted RBP5.27□□□□□ -1.57
SMAD5-208ENST00000513418 ZFATQ9P243 1243 aa5.27□□□□□ -1.57
SMAD5-208ENST00000513418 BIN2Q9UBW5 565 aaPredicted RBP5.27□□□□□ -1.57
SMAD5-208ENST00000513418 KLF15Q9UIH9 416 aa5.27□□□□□ -1.57
SMAD5-208ENST00000513418 ZBTB7CA1YPR0 619 aa5.26□□□□□ -1.57
SMAD5-208ENST00000513418 UNCXA6NJT0 531 aa5.26□□□□□ -1.57
SMAD5-208ENST00000513418 DNM1Q05193 864 aaKnown RBP5.26□□□□□ -1.57
SMAD5-208ENST00000513418 TNP2Q05952 138 aa5.26□□□□□ -1.57
SMAD5-208ENST00000513418 BICDL1Q6ZP65 573 aa5.26□□□□□ -1.57
SMAD5-208ENST00000513418 VTI1AQ96AJ9 217 aa5.26□□□□□ -1.57
SMAD5-208ENST00000513418 NUDT16Q96DE0 195 aaKnown RBP5.26□□□□□ -1.57
SMAD5-208ENST00000513418 CFHR5Q9BXR6 569 aa5.26□□□□□ -1.57
SMAD5-208ENST00000513418 WWC3Q9ULE0 1092 aa5.26□□□□□ -1.57
SMAD5-208ENST00000513418 CYP2E1P05181 493 aaPredicted RBP5.25□□□□□ -1.57
SMAD5-208ENST00000513418 MAPTP10636 758 aaKnown RBP5.25□□□□□ -1.57
SMAD5-208ENST00000513418 ACPPP15309 386 aa5.25□□□□□ -1.57
SMAD5-208ENST00000513418 INSM1Q01101 510 aaPredicted RBP5.25□□□□□ -1.57
SMAD5-208ENST00000513418 ORC1Q13415 861 aa5.25□□□□□ -1.57
SMAD5-208ENST00000513418 NBPF1Q3BBV0 1214 aa5.25□□□□□ -1.57
SMAD5-208ENST00000513418 COL13A1Q5TAT6 717 aaPredicted RBP5.25□□□□□ -1.57
SMAD5-208ENST00000513418 NANOS1Q8WY41 292 aaKnown RBP5.25□□□□□ -1.57
SMAD5-208ENST00000513418 NUCKS1Q9H1E3 243 aaKnown RBP5.25□□□□□ -1.57
SMAD5-208ENST00000513418 TMEM63CQ9P1W3 806 aa5.25□□□□□ -1.57
SMAD5-208ENST00000513418 FOXD3Q9UJU5 478 aaPredicted RBP5.25□□□□□ -1.57
SMAD5-208ENST00000513418 RTCBQ9Y3I0 505 aaKnown RBP5.25□□□□□ -1.57
SMAD5-208ENST00000513418 LOC100996750A0A140TA64 210 aa5.24□□□□□ -1.57
SMAD5-208ENST00000513418 CDC14CA4D256 554 aa5.24□□□□□ -1.57
SMAD5-208ENST00000513418 P4HBP07237 508 aaKnown RBP5.24□□□□□ -1.57
SMAD5-208ENST00000513418 TMCO4Q5TGY1 634 aa5.24□□□□□ -1.57
SMAD5-208ENST00000513418 B4GALNT3Q6L9W6 998 aa5.24□□□□□ -1.57
SMAD5-208ENST00000513418 PI16Q6UXB8 463 aa5.24□□□□□ -1.57
SMAD5-208ENST00000513418 TRIM22Q8IYM9 498 aa5.24□□□□□ -1.57
SMAD5-208ENST00000513418 GJD3Q8N144 294 aa5.24□□□□□ -1.57
SMAD5-208ENST00000513418 FAM129BQ96TA1 746 aa5.24□□□□□ -1.57
SMAD5-208ENST00000513418 KRTAP4-6Q9BYQ5 205 aa5.24□□□□□ -1.57
SMAD5-208ENST00000513418 CHRDQ9H2X0 955 aa5.24□□□□□ -1.57
SMAD5-208ENST00000513418 BRD7Q9NPI1 651 aa5.24□□□□□ -1.57
SMAD5-208ENST00000513418 CNTN3Q9P232 1028 aa5.24□□□□□ -1.57
SMAD5-208ENST00000513418 ANKRD33BA6NCL7 494 aa5.23□□□□□ -1.57
SMAD5-208ENST00000513418 KHNYNO15037 678 aaKnown RBP5.23□□□□□ -1.57
SMAD5-208ENST00000513418 TATP17735 454 aaPredicted RBP5.23□□□□□ -1.57
SMAD5-208ENST00000513418 TARSP26639 723 aaKnown RBP5.23□□□□□ -1.57
SMAD5-208ENST00000513418 GTF2E1P29083 439 aaPredicted RBP5.23□□□□□ -1.57
SMAD5-208ENST00000513418 MARSP56192 900 aaKnown RBP5.23□□□□□ -1.57
SMAD5-208ENST00000513418 PLAURQ03405 335 aa5.23□□□□□ -1.57
SMAD5-208ENST00000513418 SF3B2Q13435 895 aaKnown RBP5.23□□□□□ -1.57
SMAD5-208ENST00000513418 DSC3Q14574 896 aa5.23□□□□□ -1.57
SMAD5-208ENST00000513418 C1orf229Q6ZS94 237 aaPredicted RBP5.23□□□□□ -1.57
SMAD5-208ENST00000513418 KRT25Q7Z3Z0 450 aa5.23□□□□□ -1.57
SMAD5-208ENST00000513418 FBXO33Q7Z6M2 555 aa5.23□□□□□ -1.57
SMAD5-208ENST00000513418 CEP63Q96MT8 703 aa5.23□□□□□ -1.57
SMAD5-208ENST00000513418 ATXN7O15265 892 aaPredicted RBP5.22□□□□□ -1.57
SMAD5-208ENST00000513418 SASH3O75995 380 aa5.22□□□□□ -1.57
SMAD5-208ENST00000513418 POLR3DP05423 398 aaPredicted RBP5.22□□□□□ -1.57
SMAD5-208ENST00000513418 BRD2P25440 801 aaKnown RBP5.22□□□□□ -1.57
SMAD5-208ENST00000513418 MAPK1P28482 360 aa5.22□□□□□ -1.57
SMAD5-208ENST00000513418 IRS1P35568 1242 aa5.22□□□□□ -1.57
SMAD5-208ENST00000513418 CCDC27Q2M243 656 aa5.22□□□□□ -1.57
SMAD5-208ENST00000513418 IER5Q5VY09 327 aa5.22□□□□□ -1.57
SMAD5-208ENST00000513418 CMTR1Q8N1G2 835 aaKnown RBP5.22□□□□□ -1.57
SMAD5-208ENST00000513418 LATS2Q9NRM7 1088 aa5.22□□□□□ -1.57
SMAD5-208ENST00000513418 TRPA1O75762 1119 aa5.21□□□□□ -1.58
SMAD5-208ENST00000513418 FAM13AO94988 1023 aa5.21□□□□□ -1.58
SMAD5-208ENST00000513418 FAM157BP0CG42 384 aa5.21□□□□□ -1.58
SMAD5-208ENST00000513418 SAMD5Q5TGI4 173 aa5.21□□□□□ -1.58
SMAD5-208ENST00000513418 WHAMMQ8TF30 809 aa5.21□□□□□ -1.58
SMAD5-208ENST00000513418 FAM161BQ96MY7 647 aa5.21□□□□□ -1.58
SMAD5-208ENST00000513418 GSX2Q9BZM3 304 aa5.21□□□□□ -1.58
SMAD5-208ENST00000513418 DCTN4Q9UJW0 460 aa5.21□□□□□ -1.58
SMAD5-208ENST00000513418 CHMP3Q9Y3E7 222 aa5.21□□□□□ -1.58
SMAD5-208ENST00000513418 PCDHGC4Q9Y5F7 938 aa5.21□□□□□ -1.58
SMAD5-208ENST00000513418 ZBTB42B2RXF5 422 aa5.2□□□□□ -1.58
SMAD5-208ENST00000513418 TREHO43280 583 aa5.2□□□□□ -1.58
SMAD5-208ENST00000513418 NLRP8Q86W28 1048 aa5.2□□□□□ -1.58
SMAD5-208ENST00000513418 C1orf127Q8N9H9 656 aa5.2□□□□□ -1.58
SMAD5-208ENST00000513418 ZSCAN1Q8NBB4 408 aa5.2□□□□□ -1.58
SMAD5-208ENST00000513418 ASB16Q96NS5 453 aa5.2□□□□□ -1.58
SMAD5-208ENST00000513418 HHIPQ96QV1 700 aa5.2□□□□□ -1.58
SMAD5-208ENST00000513418 MDFIQ99750 246 aa5.2□□□□□ -1.58
SMAD5-208ENST00000513418 RBCK1Q9BYM8 510 aa5.2□□□□□ -1.58
SMAD5-208ENST00000513418 NIF3L1Q9GZT8 377 aa5.2□□□□□ -1.58
SMAD5-208ENST00000513418 KANSL3Q9P2N6 904 aa5.2□□□□□ -1.58
SMAD5-208ENST00000513418 NAGPAQ9UK23 515 aa5.2□□□□□ -1.58
SMAD5-208ENST00000513418 EREGO14944 169 aa5.19□□□□□ -1.58
SMAD5-208ENST00000513418 MZF1P28698 734 aaPredicted RBP5.19□□□□□ -1.58
SMAD5-208ENST00000513418 ARSDP51689 593 aa5.19□□□□□ -1.58
SMAD5-208ENST00000513418 KCNQ4P56696 695 aa5.19□□□□□ -1.58
SMAD5-208ENST00000513418 MLLT1Q03111 559 aaPredicted RBP5.19□□□□□ -1.58
SMAD5-208ENST00000513418 FMR1Q06787 632 aaKnown RBP eCLIP5.19□□□□□ -1.582e-17■■■■■ 60.8
SMAD5-208ENST00000513418 LDLRAD1Q5T700 205 aa5.19□□□□□ -1.58
SMAD5-208ENST00000513418 FCHSD1Q86WN1 690 aa5.19□□□□□ -1.58
SMAD5-208ENST00000513418 CNTNAP3BQ96NU0 1288 aa5.19□□□□□ -1.58
SMAD5-208ENST00000513418 CNTNAP3Q9BZ76 1288 aa5.19□□□□□ -1.58
SMAD5-208ENST00000513418 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.19□□□□□ -1.58
SMAD5-208ENST00000513418 MMP20O60882 483 aa5.18□□□□□ -1.58
SMAD5-208ENST00000513418 XYLBO75191 536 aa5.18□□□□□ -1.58
SMAD5-208ENST00000513418 TNFRSF21O75509 655 aa5.18□□□□□ -1.58
SMAD5-208ENST00000513418 NFKB1P19838 968 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms