RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 NMRK2Q9NPI5 230 aa25.3■■□□□ 1.64
CCHCR1-230ENST00000513222 GLTPD2A6NH11 291 aa25.29■■□□□ 1.64
CCHCR1-230ENST00000513222 FAM177BA6PVY3 158 aa25.29■■□□□ 1.64
CCHCR1-230ENST00000513222 TCIRG1Q13488 830 aa25.29■■□□□ 1.64
CCHCR1-230ENST00000513222 HYPKQ9NX55 129 aa25.29■■□□□ 1.64
CCHCR1-230ENST00000513222 CEP350Q5VT06 3117 aa25.29■■□□□ 1.64
CCHCR1-230ENST00000513222 LAMB2P55268 1798 aa25.28■■□□□ 1.64
CCHCR1-230ENST00000513222 PLBD2Q8NHP8 589 aa25.28■■□□□ 1.64
CCHCR1-230ENST00000513222 NECTIN2Q92692 538 aa25.28■■□□□ 1.64
CCHCR1-230ENST00000513222 TAOK3Q9H2K8 898 aa25.28■■□□□ 1.64
CCHCR1-230ENST00000513222 WDR90Q96KV7 1748 aa25.27■■□□□ 1.64
CCHCR1-230ENST00000513222 NLRP10Q86W26 655 aa25.27■■□□□ 1.64
CCHCR1-230ENST00000513222 CRAMP1Q96RY5 1269 aa25.27■■□□□ 1.64
CCHCR1-230ENST00000513222 CCDC93Q567U6 631 aa25.26■■□□□ 1.63
CCHCR1-230ENST00000513222 WWC1Q8IX03 1113 aa25.26■■□□□ 1.63
CCHCR1-230ENST00000513222 UTP14AQ9BVJ6 771 aaKnown RBP25.26■■□□□ 1.63
CCHCR1-230ENST00000513222 TRIM28Q13263 835 aaKnown RBP25.25■■□□□ 1.63
CCHCR1-230ENST00000513222 CC2D2BQ6DHV5 1058 aa25.25■■□□□ 1.63
CCHCR1-230ENST00000513222 ANKRD13DQ6ZTN6 518 aa25.25■■□□□ 1.63
CCHCR1-230ENST00000513222 RTKN2Q8IZC4 609 aa25.25■■□□□ 1.63
CCHCR1-230ENST00000513222 CHMP4AQ9BY43 222 aa25.25■■□□□ 1.63
CCHCR1-230ENST00000513222 MRS2Q9HD23 443 aa25.25■■□□□ 1.63
CCHCR1-230ENST00000513222 IL16Q14005 1332 aa25.25■■□□□ 1.63
CCHCR1-230ENST00000513222 CACNA1FO60840 1977 aa25.24■■□□□ 1.63
CCHCR1-230ENST00000513222 SENP3-EIF4A1A0A087X0R7 540 aa25.24■■□□□ 1.63
CCHCR1-230ENST00000513222 AIMP1Q12904 312 aaKnown RBP25.24■■□□□ 1.63
CCHCR1-230ENST00000513222 GRIPAP1Q4V328 841 aa25.24■■□□□ 1.63
CCHCR1-230ENST00000513222 RBM46Q8TBY0 533 aaKnown RBP25.24■■□□□ 1.63
CCHCR1-230ENST00000513222 ISCA1Q9BUE6 129 aa25.24■■□□□ 1.63
CCHCR1-230ENST00000513222 HSPA6P17066 643 aa25.23■■□□□ 1.63
CCHCR1-230ENST00000513222 FKBP4Q02790 459 aaKnown RBP eCLIP25.23■■□□□ 1.63
CCHCR1-230ENST00000513222 C8orf58Q8NAV2 365 aa25.23■■□□□ 1.63
CCHCR1-230ENST00000513222 ZNF219Q9P2Y4 722 aaPredicted RBP25.23■■□□□ 1.63
CCHCR1-230ENST00000513222 NLRP3Q96P20 1036 aa25.22■■□□□ 1.63
CCHCR1-230ENST00000513222 DDX60Q8IY21 1712 aaKnown RBP25.22■■□□□ 1.63
CCHCR1-230ENST00000513222 C3orf67Q6ZVT6 689 aa25.21■■□□□ 1.63
CCHCR1-230ENST00000513222 PSMD1Q99460 953 aa25.21■■□□□ 1.63
CCHCR1-230ENST00000513222 RRAGCQ9HB90 399 aa25.21■■□□□ 1.63
CCHCR1-230ENST00000513222 RPGRQ92834 1020 aaKnown RBP25.2■■□□□ 1.62
CCHCR1-230ENST00000513222 POTECB2RU33 542 aa25.19■■□□□ 1.62
CCHCR1-230ENST00000513222 VEGFAP15692 232 aaPredicted RBP25.19■■□□□ 1.62
CCHCR1-230ENST00000513222 DPY19L2Q6NUT2 758 aa25.19■■□□□ 1.62
CCHCR1-230ENST00000513222 RBM17Q96I25 401 aaKnown RBP25.19■■□□□ 1.62
CCHCR1-230ENST00000513222 SH3TC1Q8TE82 1336 aa25.18■■□□□ 1.62
CCHCR1-230ENST00000513222 FSTL1Q12841 308 aa25.18■■□□□ 1.62
CCHCR1-230ENST00000513222 OLFM4Q6UX06 510 aa25.18■■□□□ 1.62
CCHCR1-230ENST00000513222 SCN4AP35499 1836 aa25.17■■□□□ 1.62
CCHCR1-230ENST00000513222 CCDC30Q5VVM6 783 aa25.17■■□□□ 1.62
CCHCR1-230ENST00000513222 WDR63Q8IWG1 891 aa25.16■■□□□ 1.62
CCHCR1-230ENST00000513222 TSPYL6Q8N831 410 aa25.16■■□□□ 1.62
CCHCR1-230ENST00000513222 TRMT112Q9UI30 125 aaKnown RBP25.16■■□□□ 1.62
CCHCR1-230ENST00000513222 SYNE4Q8N205 404 aa25.15■■□□□ 1.62
CCHCR1-230ENST00000513222 PHAXQ9H814 394 aaKnown RBP25.15■■□□□ 1.62
CCHCR1-230ENST00000513222 ELL2O00472 640 aaPredicted RBP25.14■■□□□ 1.62
CCHCR1-230ENST00000513222 BBOX1O75936 387 aa25.14■■□□□ 1.62
CCHCR1-230ENST00000513222 TAF1P21675 1872 aa25.14■■□□□ 1.61
CCHCR1-230ENST00000513222 C16orf71Q8IYS4 520 aaPredicted RBP25.13■■□□□ 1.61
CCHCR1-230ENST00000513222 L3MBTL3Q96JM7 780 aaPredicted RBP25.13■■□□□ 1.61
CCHCR1-230ENST00000513222 ATP6V0A2Q9Y487 856 aa25.13■■□□□ 1.61
CCHCR1-230ENST00000513222 LRRC37AA6NMS7 1700 aa25.12■■□□□ 1.61
CCHCR1-230ENST00000513222 FZD9O00144 591 aa25.12■■□□□ 1.61
CCHCR1-230ENST00000513222 HCLS1P14317 486 aaPredicted RBP25.12■■□□□ 1.61
CCHCR1-230ENST00000513222 IARSP41252 1262 aaKnown RBP25.12■■□□□ 1.61
CCHCR1-230ENST00000513222 SF3B3Q15393 1217 aaKnown RBP25.12■■□□□ 1.61
CCHCR1-230ENST00000513222 TSR2Q969E8 191 aaKnown RBP25.12■■□□□ 1.61
CCHCR1-230ENST00000513222 VPS33BQ9H267 617 aa25.12■■□□□ 1.61
CCHCR1-230ENST00000513222 ZNF277Q9NRM2 450 aaPredicted RBP25.12■■□□□ 1.61
CCHCR1-230ENST00000513222 ABCC4O15439 1325 aa25.12■■□□□ 1.61
CCHCR1-230ENST00000513222 PPEF1O14829 653 aaPredicted RBP25.11■■□□□ 1.61
CCHCR1-230ENST00000513222 APLP1P51693 650 aa25.11■■□□□ 1.61
CCHCR1-230ENST00000513222 RTFDC1Q9BY42 306 aaPredicted RBP25.11■■□□□ 1.61
CCHCR1-230ENST00000513222 GOLGA2Q08379 1002 aa25.1■■□□□ 1.61
CCHCR1-230ENST00000513222 SP8Q8IXZ3 490 aa25.1■■□□□ 1.61
CCHCR1-230ENST00000513222 ATP5J2-PTCD1G3V325 749 aa25.09■■□□□ 1.61
CCHCR1-230ENST00000513222 TMC4Q7Z404 712 aa25.09■■□□□ 1.61
CCHCR1-230ENST00000513222 RIC3Q7Z5B4 369 aa25.09■■□□□ 1.61
CCHCR1-230ENST00000513222 CCDC191Q8NCU4 936 aa25.09■■□□□ 1.61
CCHCR1-230ENST00000513222 SMC1BQ8NDV3 1235 aa25.09■■□□□ 1.61
CCHCR1-230ENST00000513222 COL4A5P29400 1685 aa25.09■■□□□ 1.61
CCHCR1-230ENST00000513222 DDNO94850 711 aaPredicted RBP25.08■■□□□ 1.61
CCHCR1-230ENST00000513222 TWISTNBQ3B726 338 aaPredicted RBP25.08■■□□□ 1.61
CCHCR1-230ENST00000513222 ZBTB38Q8NAP3 1195 aaPredicted RBP25.08■■□□□ 1.61
CCHCR1-230ENST00000513222 FAM89AQ96GI7 184 aa25.08■■□□□ 1.61
CCHCR1-230ENST00000513222 METTL22Q9BUU2 404 aaPredicted RBP25.08■■□□□ 1.61
CCHCR1-230ENST00000513222 GRAPQ13588 217 aa25.07■■□□□ 1.6
CCHCR1-230ENST00000513222 GRAPLQ8TC17 118 aaPredicted RBP25.07■■□□□ 1.6
CCHCR1-230ENST00000513222 DDX58O95786 925 aaKnown RBP25.06■■□□□ 1.6
CCHCR1-230ENST00000513222 KSR2Q6VAB6 950 aa25.06■■□□□ 1.6
CCHCR1-230ENST00000513222 DDX46Q7L014 1031 aaKnown RBP25.06■■□□□ 1.6
CCHCR1-230ENST00000513222 FANCIQ9NVI1 1328 aa25.06■■□□□ 1.6
CCHCR1-230ENST00000513222 DNAJC5GQ8N7S2 189 aa25.05■■□□□ 1.6
CCHCR1-230ENST00000513222 PCCAP05165 728 aaPredicted RBP25.04■■□□□ 1.6
CCHCR1-230ENST00000513222 HSP90B1P14625 803 aaKnown RBP25.04■■□□□ 1.6
CCHCR1-230ENST00000513222 SLC51AQ86UW1 340 aa25.04■■□□□ 1.6
CCHCR1-230ENST00000513222 ZNF521Q96K83 1311 aa25.04■■□□□ 1.6
CCHCR1-230ENST00000513222 ZNF541Q9H0D2 1346 aa25.04■■□□□ 1.6
CCHCR1-230ENST00000513222 LTBP1Q14766 1721 aa25.03■■□□□ 1.6
CCHCR1-230ENST00000513222 ADAMTSL1Q8N6G6 1762 aa25.03■■□□□ 1.6
CCHCR1-230ENST00000513222 IQCA1LA6NCM1 817 aa25.03■■□□□ 1.6
CCHCR1-230ENST00000513222 VAMP4O75379 141 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms