RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 CCDC171Q6TFL3 1326 aa17.48■□□□□ 0.39
USP38-202ENST00000510377 ATP5J2-PTCD1G3V325 749 aa17.48■□□□□ 0.39
USP38-202ENST00000510377 PTCD1O75127 700 aaKnown RBP17.48■□□□□ 0.39
USP38-202ENST00000510377 ZC3H6P61129 1189 aaKnown RBP17.48■□□□□ 0.39
USP38-202ENST00000510377 LGR6Q9HBX8 967 aa17.48■□□□□ 0.39
USP38-202ENST00000510377 PES1O00541 588 aaKnown RBP17.48■□□□□ 0.39
USP38-202ENST00000510377 CPLX2Q6PUV4 134 aaKnown RBP17.48■□□□□ 0.39
USP38-202ENST00000510377 EDC3Q96F86 508 aaKnown RBP17.48■□□□□ 0.39
USP38-202ENST00000510377 SKILP12757 684 aa17.47■□□□□ 0.39
USP38-202ENST00000510377 CHST3Q7LGC8 479 aa17.47■□□□□ 0.39
USP38-202ENST00000510377 STRN4Q9NRL3 753 aa17.47■□□□□ 0.39
USP38-202ENST00000510377 TRIM29Q14134 588 aa17.47■□□□□ 0.39
USP38-202ENST00000510377 TTLL5Q6EMB2 1281 aa17.47■□□□□ 0.39
USP38-202ENST00000510377 TMX1Q9H3N1 280 aa17.47■□□□□ 0.39
USP38-202ENST00000510377 MTMR6Q9Y217 621 aa17.47■□□□□ 0.39
USP38-202ENST00000510377 FLT4P35916 1363 aa17.47■□□□□ 0.39
USP38-202ENST00000510377 POLR3DP05423 398 aaPredicted RBP17.47■□□□□ 0.39
USP38-202ENST00000510377 ERCC4Q92889 916 aaPredicted RBP17.47■□□□□ 0.39
USP38-202ENST00000510377 KCNQ3O43525 872 aa17.46■□□□□ 0.39
USP38-202ENST00000510377 SLC39A6Q13433 755 aa17.46■□□□□ 0.39
USP38-202ENST00000510377 IL17REQ8NFR9 667 aa17.46■□□□□ 0.39
USP38-202ENST00000510377 CBX8Q9HC52 389 aa17.46■□□□□ 0.39
USP38-202ENST00000510377 Q6ZUG5 572 aa17.46■□□□□ 0.39
USP38-202ENST00000510377 GLI2P10070 1586 aa17.46■□□□□ 0.39
USP38-202ENST00000510377 TTC6Q86TZ1 520 aa17.46■□□□□ 0.39
USP38-202ENST00000510377 KIF18AQ8NI77 898 aa17.46■□□□□ 0.39
USP38-202ENST00000510377 JAK2O60674 1132 aa17.45■□□□□ 0.38
USP38-202ENST00000510377 UBE3BQ7Z3V4 1068 aa17.45■□□□□ 0.38
USP38-202ENST00000510377 SMAP1Q8IYB5 467 aaPredicted RBP17.45■□□□□ 0.38
USP38-202ENST00000510377 ZBTB9Q96C00 473 aa17.45■□□□□ 0.38
USP38-202ENST00000510377 RGS12O14924 1447 aa17.45■□□□□ 0.38
USP38-202ENST00000510377 PNPLA6Q8IY17 1366 aa17.45■□□□□ 0.38
USP38-202ENST00000510377 HAND2P61296 217 aa17.45■□□□□ 0.38
USP38-202ENST00000510377 CCDC129Q6ZRS4 1044 aa17.45■□□□□ 0.38
USP38-202ENST00000510377 ANO10Q9NW15 660 aa17.45■□□□□ 0.38
USP38-202ENST00000510377 NPHP3Q7Z494 1330 aa17.45■□□□□ 0.38
USP38-202ENST00000510377 GOLIM4O00461 696 aa17.45■□□□□ 0.38
USP38-202ENST00000510377 PODXL2Q9NZ53 605 aa17.45■□□□□ 0.38
USP38-202ENST00000510377 TMC6Q7Z403 805 aa17.45■□□□□ 0.38
USP38-202ENST00000510377 SSH3Q8TE77 659 aa17.45■□□□□ 0.38
USP38-202ENST00000510377 ARGLU1Q9NWB6 273 aaPredicted RBP17.45■□□□□ 0.38
USP38-202ENST00000510377 SFPQP23246 707 aaKnown RBP eCLIP17.44■□□□□ 0.38
USP38-202ENST00000510377 SNRKQ9NRH2 765 aa17.44■□□□□ 0.38
USP38-202ENST00000510377 NRBP1Q9UHY1 535 aa17.44■□□□□ 0.38
USP38-202ENST00000510377 UHRF1BP1LA0JNW5 1464 aa17.44■□□□□ 0.38
USP38-202ENST00000510377 AOPEPQ8N6M6 819 aa17.44■□□□□ 0.38
USP38-202ENST00000510377 METP08581 1390 aa17.43■□□□□ 0.38
USP38-202ENST00000510377 GRM8O00222 908 aa17.43■□□□□ 0.38
USP38-202ENST00000510377 SLC27A2O14975 620 aa17.43■□□□□ 0.38
USP38-202ENST00000510377 LSG1Q9H089 658 aaKnown RBP17.43■□□□□ 0.38
USP38-202ENST00000510377 TPCN1Q9ULQ1 816 aa17.43■□□□□ 0.38
USP38-202ENST00000510377 TTC41PQ6P2S7 1318 aa17.43■□□□□ 0.38
USP38-202ENST00000510377 OLFM4Q6UX06 510 aa17.43■□□□□ 0.38
USP38-202ENST00000510377 USP16Q9Y5T5 823 aa17.43■□□□□ 0.38
USP38-202ENST00000510377 A0A087WWV3 80 aa17.43■□□□□ 0.38
USP38-202ENST00000510377 STX1AQ16623 288 aa17.43■□□□□ 0.38
USP38-202ENST00000510377 HSP90AA4PQ58FG1 418 aa17.43■□□□□ 0.38
USP38-202ENST00000510377 PRR36Q9H6K5 1346 aa17.43■□□□□ 0.38
USP38-202ENST00000510377 CFAP100Q494V2 611 aa17.42■□□□□ 0.38
USP38-202ENST00000510377 CHMP4CQ96CF2 233 aa17.42■□□□□ 0.38
USP38-202ENST00000510377 HYPKQ9NX55 129 aa17.42■□□□□ 0.38
USP38-202ENST00000510377 STAP2Q9UGK3 403 aa17.42■□□□□ 0.38
USP38-202ENST00000510377 MAP3K5Q99683 1374 aa17.42■□□□□ 0.38
USP38-202ENST00000510377 TSPOAP1O95153 1857 aa17.42■□□□□ 0.38
USP38-202ENST00000510377 HOXC9P31274 260 aa17.42■□□□□ 0.38
USP38-202ENST00000510377 IL25Q9H293 177 aa17.42■□□□□ 0.38
USP38-202ENST00000510377 BICC1Q9H694 974 aaKnown RBP17.42■□□□□ 0.38
USP38-202ENST00000510377 MED14O60244 1454 aa17.42■□□□□ 0.38
USP38-202ENST00000510377 TEX35Q5T0J7 233 aa17.41■□□□□ 0.38
USP38-202ENST00000510377 A0A087WZG4 1122 aa17.41■□□□□ 0.38
USP38-202ENST00000510377 URI1O94763 535 aaPredicted RBP17.41■□□□□ 0.38
USP38-202ENST00000510377 LEO1Q8WVC0 666 aaPredicted RBP17.41■□□□□ 0.38
USP38-202ENST00000510377 MYOM1P52179 1685 aa17.41■□□□□ 0.38
USP38-202ENST00000510377 CCDC69A6NI79 296 aa17.41■□□□□ 0.38
USP38-202ENST00000510377 KSR2Q6VAB6 950 aa17.41■□□□□ 0.38
USP38-202ENST00000510377 POLR3GO15318 223 aaPredicted RBP17.4■□□□□ 0.38
USP38-202ENST00000510377 APOBRQ0VD83 1088 aa17.4■□□□□ 0.38
USP38-202ENST00000510377 RASSF8Q8NHQ8 419 aa17.4■□□□□ 0.38
USP38-202ENST00000510377 UBXN4Q92575 508 aa17.4■□□□□ 0.38
USP38-202ENST00000510377 ADGRB3O60242 1522 aa17.4■□□□□ 0.38
USP38-202ENST00000510377 PHF8Q9UPP1 1060 aa17.4■□□□□ 0.38
USP38-202ENST00000510377 U3KPZ7 1027 aaPredicted RBP17.4■□□□□ 0.38
USP38-202ENST00000510377 LRRFIP1Q32MZ4 808 aaKnown RBP17.4■□□□□ 0.38
USP38-202ENST00000510377 RRP12Q5JTH9 1297 aaKnown RBP17.4■□□□□ 0.38
USP38-202ENST00000510377 NR1I2O75469 434 aa17.4■□□□□ 0.38
USP38-202ENST00000510377 PDIA4P13667 645 aaKnown RBP17.4■□□□□ 0.38
USP38-202ENST00000510377 ZNF75DP51815 510 aa17.4■□□□□ 0.38
USP38-202ENST00000510377 C8orf76Q96K31 380 aa17.4■□□□□ 0.38
USP38-202ENST00000510377 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.4■□□□□ 0.38
USP38-202ENST00000510377 XAGE3Q8WTP9 111 aa17.39■□□□□ 0.37
USP38-202ENST00000510377 PRDM11Q9NQV5 511 aa17.39■□□□□ 0.37
USP38-202ENST00000510377 CFAP74Q9C0B2 1584 aa17.39■□□□□ 0.37
USP38-202ENST00000510377 CCDC66A2RUB6 948 aa17.39■□□□□ 0.37
USP38-202ENST00000510377 SNW1Q13573 536 aaKnown RBP17.39■□□□□ 0.37
USP38-202ENST00000510377 COPS6Q7L5N1 327 aa17.39■□□□□ 0.37
USP38-202ENST00000510377 NCOA5Q9HCD5 579 aaKnown RBP17.39■□□□□ 0.37
USP38-202ENST00000510377 A0A0D9SFI3 127 aa17.39■□□□□ 0.37
USP38-202ENST00000510377 PAXBP1Q9Y5B6 917 aa17.39■□□□□ 0.37
USP38-202ENST00000510377 TTC21AQ8NDW8 1320 aa17.38■□□□□ 0.37
USP38-202ENST00000510377 AOX1Q06278 1338 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms