RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 HYPKQ9NX55 129 aa17.53■□□□□ 0.4
SNF8-206ENST00000509989 PDE6BP35913 854 aa17.52■□□□□ 0.4
SNF8-206ENST00000509989 OLFM4Q6UX06 510 aa17.52■□□□□ 0.4
SNF8-206ENST00000509989 KLRG2A4D1S0 409 aaPredicted RBP17.51■□□□□ 0.39
SNF8-206ENST00000509989 RASSF7Q02833 373 aa17.51■□□□□ 0.39
SNF8-206ENST00000509989 CCDC30Q5VVM6 783 aa17.51■□□□□ 0.39
SNF8-206ENST00000509989 TTLL6Q8N841 843 aa17.51■□□□□ 0.39
SNF8-206ENST00000509989 ISCA1Q9BUE6 129 aa17.51■□□□□ 0.39
SNF8-206ENST00000509989 GOLGA2Q08379 1002 aa17.5■□□□□ 0.39
SNF8-206ENST00000509989 JARID2Q92833 1246 aaPredicted RBP17.5■□□□□ 0.39
SNF8-206ENST00000509989 ADCY9O60503 1353 aa17.5■□□□□ 0.39
SNF8-206ENST00000509989 C21orf2O43822 256 aa17.49■□□□□ 0.39
SNF8-206ENST00000509989 SLC4A2P04920 1241 aa17.49■□□□□ 0.39
SNF8-206ENST00000509989 GTF2E1P29083 439 aaPredicted RBP17.49■□□□□ 0.39
SNF8-206ENST00000509989 RTL5Q5HYW3 569 aaPredicted RBP17.49■□□□□ 0.39
SNF8-206ENST00000509989 ZNF784Q8NCA9 323 aaPredicted RBP17.49■□□□□ 0.39
SNF8-206ENST00000509989 IBTKQ9P2D0 1353 aaPredicted RBP17.49■□□□□ 0.39
SNF8-206ENST00000509989 HCLS1P14317 486 aaPredicted RBP17.48■□□□□ 0.39
SNF8-206ENST00000509989 SLFN5Q08AF3 891 aa17.48■□□□□ 0.39
SNF8-206ENST00000509989 RIC3Q7Z5B4 369 aa17.48■□□□□ 0.39
SNF8-206ENST00000509989 MASTLQ96GX5 879 aa17.48■□□□□ 0.39
SNF8-206ENST00000509989 MYD88Q99836 296 aa17.48■□□□□ 0.39
SNF8-206ENST00000509989 UTP14AQ9BVJ6 771 aaKnown RBP17.48■□□□□ 0.39
SNF8-206ENST00000509989 PARP10Q53GL7 1025 aa17.47■□□□□ 0.39
SNF8-206ENST00000509989 STYK1Q6J9G0 422 aa17.47■□□□□ 0.39
SNF8-206ENST00000509989 PRPF40BQ6NWY9 871 aaKnown RBP17.47■□□□□ 0.39
SNF8-206ENST00000509989 NYXQ9GZU5 481 aa17.47■□□□□ 0.39
SNF8-206ENST00000509989 MAP3K2Q9Y2U5 619 aa17.47■□□□□ 0.39
SNF8-206ENST00000509989 PI4KAP2A4QPH2 592 aa17.46■□□□□ 0.39
SNF8-206ENST00000509989 NFKBIEO00221 500 aa17.46■□□□□ 0.39
SNF8-206ENST00000509989 CRY2Q49AN0 593 aa17.46■□□□□ 0.39
SNF8-206ENST00000509989 HSP90AB3PQ58FF7 597 aa17.46■□□□□ 0.39
SNF8-206ENST00000509989 PPP1R42Q7Z4L9 355 aa17.46■□□□□ 0.39
SNF8-206ENST00000509989 PI4KAP1Q8N8J0 262 aa17.46■□□□□ 0.39
SNF8-206ENST00000509989 C7orf43Q8WVR3 580 aa17.46■□□□□ 0.39
SNF8-206ENST00000509989 FAM89AQ96GI7 184 aa17.46■□□□□ 0.39
SNF8-206ENST00000509989 MYH16Q9H6N6 1097 aa17.46■□□□□ 0.39
SNF8-206ENST00000509989 TRMT112Q9UI30 125 aaKnown RBP17.46■□□□□ 0.39
SNF8-206ENST00000509989 RIC1Q4ADV7 1423 aa17.46■□□□□ 0.39
SNF8-206ENST00000509989 DICER1Q9UPY3 1922 aaKnown RBP17.45■□□□□ 0.38
SNF8-206ENST00000509989 IGKV5-2P06315 115 aa17.45■□□□□ 0.38
SNF8-206ENST00000509989 NPR1P16066 1061 aa17.45■□□□□ 0.38
SNF8-206ENST00000509989 SLC10A5Q5PT55 438 aa17.45■□□□□ 0.38
SNF8-206ENST00000509989 TIAM2Q8IVF5 1701 aa17.44■□□□□ 0.38
SNF8-206ENST00000509989 FLIIQ13045 1269 aa17.44■□□□□ 0.38
SNF8-206ENST00000509989 METTL22Q9BUU2 404 aaPredicted RBP17.44■□□□□ 0.38
SNF8-206ENST00000509989 STK31Q9BXU1 1019 aa17.44■□□□□ 0.38
SNF8-206ENST00000509989 CWF19L2Q2TBE0 894 aaKnown RBP17.43■□□□□ 0.38
SNF8-206ENST00000509989 C9orf131Q5VYM1 1079 aa17.43■□□□□ 0.38
SNF8-206ENST00000509989 KSR2Q6VAB6 950 aa17.43■□□□□ 0.38
SNF8-206ENST00000509989 TRMT2AQ8IZ69 625 aaKnown RBP17.43■□□□□ 0.38
SNF8-206ENST00000509989 ZNF526Q8TF50 670 aaPredicted RBP17.43■□□□□ 0.38
SNF8-206ENST00000509989 CNKSR1Q969H4 720 aa17.43■□□□□ 0.38
SNF8-206ENST00000509989 SNED1Q8TER0 1413 aa17.42■□□□□ 0.38
SNF8-206ENST00000509989 F6X3S4 739 aa17.42■□□□□ 0.38
SNF8-206ENST00000509989 PDZRN3Q9UPQ7 1066 aa17.42■□□□□ 0.38
SNF8-206ENST00000509989 SH3TC1Q8TE82 1336 aa17.42■□□□□ 0.38
SNF8-206ENST00000509989 E9PSI1 815 aa17.41■□□□□ 0.38
SNF8-206ENST00000509989 HOXA10P31260 410 aaPredicted RBP17.41■□□□□ 0.38
SNF8-206ENST00000509989 TRIM28Q13263 835 aaKnown RBP17.41■□□□□ 0.38
SNF8-206ENST00000509989 MYH3P11055 1940 aa17.41■□□□□ 0.38
SNF8-206ENST00000509989 SPEF2Q9C093 1822 aa17.4■□□□□ 0.38
SNF8-206ENST00000509989 BCL2L13Q9BXK5 485 aa17.4■□□□□ 0.38
SNF8-206ENST00000509989 RNF181Q9P0P0 153 aa17.4■□□□□ 0.38
SNF8-206ENST00000509989 ABCC4O15439 1325 aa17.4■□□□□ 0.38
SNF8-206ENST00000509989 FKBP5Q13451 457 aaPredicted RBP17.39■□□□□ 0.37
SNF8-206ENST00000509989 RPGRQ92834 1020 aaKnown RBP17.39■□□□□ 0.37
SNF8-206ENST00000509989 NLRP3Q96P20 1036 aa17.39■□□□□ 0.37
SNF8-206ENST00000509989 COL4A5P29400 1685 aa17.39■□□□□ 0.37
SNF8-206ENST00000509989 NEURL1BA8MQ27 555 aa17.38■□□□□ 0.37
SNF8-206ENST00000509989 IRS4O14654 1257 aaPredicted RBP17.38■□□□□ 0.37
SNF8-206ENST00000509989 DDX58O95786 925 aaKnown RBP17.38■□□□□ 0.37
SNF8-206ENST00000509989 MRPL50Q8N5N7 158 aaKnown RBP17.38■□□□□ 0.37
SNF8-206ENST00000509989 SSH1Q8WYL5 1049 aa17.38■□□□□ 0.37
SNF8-206ENST00000509989 HNRNPUQ00839 825 aaKnown RBP eCLIP17.37■□□□□ 0.37
SNF8-206ENST00000509989 ZBTB38Q8NAP3 1195 aaPredicted RBP17.37■□□□□ 0.37
SNF8-206ENST00000509989 CCDC191Q8NCU4 936 aa17.37■□□□□ 0.37
SNF8-206ENST00000509989 CCDC85AQ96PX6 553 aaPredicted RBP17.37■□□□□ 0.37
SNF8-206ENST00000509989 CRAMP1Q96RY5 1269 aa17.37■□□□□ 0.37
SNF8-206ENST00000509989 CWC25Q9NXE8 425 aaPredicted RBP17.37■□□□□ 0.37
SNF8-206ENST00000509989 RNF123Q5XPI4 1314 aa17.37■□□□□ 0.37
SNF8-206ENST00000509989 PCCAP05165 728 aaPredicted RBP17.36■□□□□ 0.37
SNF8-206ENST00000509989 ALDH1B1P30837 517 aa17.36■□□□□ 0.37
SNF8-206ENST00000509989 DNAAF4Q8WXU2 420 aa17.36■□□□□ 0.37
SNF8-206ENST00000509989 CELF1Q92879 486 aaKnown RBP17.36■□□□□ 0.37
SNF8-206ENST00000509989 RBM17Q96I25 401 aaKnown RBP17.36■□□□□ 0.37
SNF8-206ENST00000509989 LRRC37AA6NMS7 1700 aa17.35■□□□□ 0.37
SNF8-206ENST00000509989 PPEF1O14829 653 aaPredicted RBP17.35■□□□□ 0.37
SNF8-206ENST00000509989 LMNB1P20700 586 aa17.35■□□□□ 0.37
SNF8-206ENST00000509989 SEC31BQ9NQW1 1179 aa17.35■□□□□ 0.37
SNF8-206ENST00000509989 ZNF277Q9NRM2 450 aaPredicted RBP17.35■□□□□ 0.37
SNF8-206ENST00000509989 CASP7P55210 303 aa17.34■□□□□ 0.37
SNF8-206ENST00000509989 SF3B3Q15393 1217 aaKnown RBP17.34■□□□□ 0.37
SNF8-206ENST00000509989 CCDC93Q567U6 631 aa17.34■□□□□ 0.37
SNF8-206ENST00000509989 CHMP4AQ9BY43 222 aa17.34■□□□□ 0.37
SNF8-206ENST00000509989 TAOK3Q9H2K8 898 aa17.34■□□□□ 0.37
SNF8-206ENST00000509989 DUOX1Q9NRD9 1551 aa17.33■□□□□ 0.37
SNF8-206ENST00000509989 H7C1W4 665 aa17.33■□□□□ 0.36
SNF8-206ENST00000509989 GCKRQ14397 625 aa17.33■□□□□ 0.36
SNF8-206ENST00000509989 BEND3Q5T5X7 828 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms