RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 TBC1D12O60347 775 aa9.52□□□□□ -0.89
TRIO-213ENST00000509354 PIP4K2AP48426 406 aaPredicted RBP9.52□□□□□ -0.89
TRIO-213ENST00000509354 USPL1Q5W0Q7 1092 aa9.52□□□□□ -0.89
TRIO-213ENST00000509354 CCDC146Q8IYE0 955 aa9.52□□□□□ -0.89
TRIO-213ENST00000509354 FMNL2Q96PY5 1086 aa9.52□□□□□ -0.89
TRIO-213ENST00000509354 MIS18AQ9NYP9 233 aa9.52□□□□□ -0.89
TRIO-213ENST00000509354 CD2APQ9Y5K6 639 aa9.52□□□□□ -0.89
TRIO-213ENST00000509354 GTF3C3Q9Y5Q9 886 aa9.52□□□□□ -0.89
TRIO-213ENST00000509354 MAPK8IP3Q9UPT6 1336 aa9.52□□□□□ -0.89
TRIO-213ENST00000509354 A1BGP04217 495 aa9.51□□□□□ -0.89
TRIO-213ENST00000509354 SMYD5Q6GMV2 418 aa9.51□□□□□ -0.89
TRIO-213ENST00000509354 TRMT2AQ8IZ69 625 aaKnown RBP9.51□□□□□ -0.89
TRIO-213ENST00000509354 NLGN1Q8N2Q7 840 aa9.51□□□□□ -0.89
TRIO-213ENST00000509354 BCL2L12Q9HB09 334 aa9.51□□□□□ -0.89
TRIO-213ENST00000509354 ZNF330Q9Y3S2 320 aaPredicted RBP9.51□□□□□ -0.89
TRIO-213ENST00000509354 CCDC88AQ3V6T2 1871 aa9.51□□□□□ -0.89
TRIO-213ENST00000509354 CARMIL3Q8ND23 1372 aa9.5□□□□□ -0.89
TRIO-213ENST00000509354 SPDYE16A6NNV3 312 aaPredicted RBP9.5□□□□□ -0.89
TRIO-213ENST00000509354 RIMBP2O15034 1052 aa9.5□□□□□ -0.89
TRIO-213ENST00000509354 HTATSF1O43719 755 aaKnown RBP9.5□□□□□ -0.89
TRIO-213ENST00000509354 STARD3NLO95772 234 aa9.5□□□□□ -0.89
TRIO-213ENST00000509354 NEFMP07197 916 aa9.5□□□□□ -0.89
TRIO-213ENST00000509354 EIF5P55010 431 aaKnown RBP9.5□□□□□ -0.89
TRIO-213ENST00000509354 TMEM92Q6UXU6 159 aa9.5□□□□□ -0.89
TRIO-213ENST00000509354 RRP7AQ9Y3A4 280 aaKnown RBP9.5□□□□□ -0.89
TRIO-213ENST00000509354 PARP3Q9Y6F1 533 aa9.5□□□□□ -0.89
TRIO-213ENST00000509354 SBF1O95248 1867 aa9.5□□□□□ -0.89
TRIO-213ENST00000509354 ANKRD36CQ5JPF3 1778 aa9.5□□□□□ -0.89
TRIO-213ENST00000509354 POLRMTO00411 1230 aaKnown RBP9.49□□□□□ -0.89
TRIO-213ENST00000509354 ZPR1O75312 459 aa9.49□□□□□ -0.89
TRIO-213ENST00000509354 MAP3K9P80192 1104 aa9.49□□□□□ -0.89
TRIO-213ENST00000509354 TAF7Q15545 349 aaPredicted RBP9.49□□□□□ -0.89
TRIO-213ENST00000509354 CCDC27Q2M243 656 aa9.49□□□□□ -0.89
TRIO-213ENST00000509354 SLAIN1Q8ND83 568 aa9.49□□□□□ -0.89
TRIO-213ENST00000509354 NARFQ9UHQ1 456 aa9.49□□□□□ -0.89
TRIO-213ENST00000509354 USP16Q9Y5T5 823 aa9.49□□□□□ -0.89
TRIO-213ENST00000509354 ARFGEF2Q9Y6D5 1785 aa9.49□□□□□ -0.89
TRIO-213ENST00000509354 TNRC6CQ9HCJ0 1690 aaKnown RBP9.48□□□□□ -0.89
TRIO-213ENST00000509354 A0A0G2JLW4 131 aa9.48□□□□□ -0.89
TRIO-213ENST00000509354 TM4SF1P30408 202 aa9.48□□□□□ -0.89
TRIO-213ENST00000509354 TMPOP42166 694 aaKnown RBP9.48□□□□□ -0.89
TRIO-213ENST00000509354 NFIXQ14938 502 aa9.48□□□□□ -0.89
TRIO-213ENST00000509354 WDR43Q15061 677 aaKnown RBP eCLIP9.48□□□□□ -0.89
TRIO-213ENST00000509354 DOK7Q18PE1 504 aa9.48□□□□□ -0.89
TRIO-213ENST00000509354 TBC1D2BQ9UPU7 963 aa9.48□□□□□ -0.89
TRIO-213ENST00000509354 NBPF26B4DH59 902 aa9.47□□□□□ -0.89
TRIO-213ENST00000509354 SNRPA1P09661 255 aaKnown RBP9.47□□□□□ -0.89
TRIO-213ENST00000509354 DPEP1P16444 411 aa9.47□□□□□ -0.89
TRIO-213ENST00000509354 IL6STP40189 918 aaPredicted RBP9.47□□□□□ -0.89
TRIO-213ENST00000509354 RIPK4P57078 832 aa9.47□□□□□ -0.89
TRIO-213ENST00000509354 ERICH6BQ5W0A0 696 aa9.47□□□□□ -0.89
TRIO-213ENST00000509354 NBPF10Q6P3W6 841 aaKnown RBP9.47□□□□□ -0.89
TRIO-213ENST00000509354 BICDL1Q6ZP65 573 aa9.47□□□□□ -0.89
TRIO-213ENST00000509354 NBPF15Q8N660 670 aa9.47□□□□□ -0.89
TRIO-213ENST00000509354 TEX13AQ9BXU3 409 aaPredicted RBP9.47□□□□□ -0.89
TRIO-213ENST00000509354 TIAM2Q8IVF5 1701 aa9.46□□□□□ -0.89
TRIO-213ENST00000509354 DPYSL4O14531 572 aa9.46□□□□□ -0.9
TRIO-213ENST00000509354 SNPHO15079 494 aa9.46□□□□□ -0.9
TRIO-213ENST00000509354 CAMTA2O94983 1202 aa9.46□□□□□ -0.9
TRIO-213ENST00000509354 SLC34A2O95436 690 aa9.46□□□□□ -0.9
TRIO-213ENST00000509354 CHRNA5P30532 468 aa9.46□□□□□ -0.9
TRIO-213ENST00000509354 EIF4A1P60842 406 aaKnown RBP9.46□□□□□ -0.9
TRIO-213ENST00000509354 NEUROD2Q15784 382 aa9.46□□□□□ -0.9
TRIO-213ENST00000509354 TBC1D9BQ66K14 1250 aa9.46□□□□□ -0.9
TRIO-213ENST00000509354 ZNF784Q8NCA9 323 aaPredicted RBP9.46□□□□□ -0.9
TRIO-213ENST00000509354 RUNDC1Q96C34 613 aa9.46□□□□□ -0.9
TRIO-213ENST00000509354 PNNQ9H307 717 aaKnown RBP9.46□□□□□ -0.9
TRIO-213ENST00000509354 SLX4Q8IY92 1834 aa9.45□□□□□ -0.9
TRIO-213ENST00000509354 A0A087WZG4 1122 aa9.45□□□□□ -0.9
TRIO-213ENST00000509354 KCNA3P22001 575 aa9.45□□□□□ -0.9
TRIO-213ENST00000509354 PDIA6Q15084 440 aa9.45□□□□□ -0.9
TRIO-213ENST00000509354 DZIP3Q86Y13 1208 aaKnown RBP9.45□□□□□ -0.9
TRIO-213ENST00000509354 CCDC24Q8N4L8 307 aa9.45□□□□□ -0.9
TRIO-213ENST00000509354 BCS1LQ9Y276 419 aa9.45□□□□□ -0.9
TRIO-213ENST00000509354 CEP350Q5VT06 3117 aa9.45□□□□□ -0.9
TRIO-213ENST00000509354 LAMB2P55268 1798 aa9.45□□□□□ -0.9
TRIO-213ENST00000509354 FER1L6Q2WGJ9 1857 aa9.45□□□□□ -0.9
TRIO-213ENST00000509354 SENP3-EIF4A1A0A087X0R7 540 aa9.44□□□□□ -0.9
TRIO-213ENST00000509354 GRIN3BO60391 1043 aa9.44□□□□□ -0.9
TRIO-213ENST00000509354 GIGYF1O75420 1035 aaPredicted RBP9.44□□□□□ -0.9
TRIO-213ENST00000509354 SERPINB2P05120 415 aa9.44□□□□□ -0.9
TRIO-213ENST00000509354 TGFB2P61812 414 aa9.44□□□□□ -0.9
TRIO-213ENST00000509354 EMILIN3Q9NT22 766 aa9.44□□□□□ -0.9
TRIO-213ENST00000509354 TSPYL4Q9UJ04 414 aa9.44□□□□□ -0.9
TRIO-213ENST00000509354 ADCY9O60503 1353 aa9.44□□□□□ -0.9
TRIO-213ENST00000509354 ATP10DQ9P241 1426 aa9.44□□□□□ -0.9
TRIO-213ENST00000509354 DICER1Q9UPY3 1922 aaKnown RBP9.44□□□□□ -0.9
TRIO-213ENST00000509354 SLFN5Q08AF3 891 aa9.43□□□□□ -0.9
TRIO-213ENST00000509354 LMOD3Q0VAK6 560 aa9.43□□□□□ -0.9
TRIO-213ENST00000509354 KRT24Q2M2I5 525 aa9.43□□□□□ -0.9
TRIO-213ENST00000509354 DUSP27Q5VZP5 1158 aa9.43□□□□□ -0.9
TRIO-213ENST00000509354 SUPT16HQ9Y5B9 1047 aaKnown RBP9.43□□□□□ -0.9
TRIO-213ENST00000509354 APAF1O14727 1248 aa9.42□□□□□ -0.9
TRIO-213ENST00000509354 ANXA1P04083 346 aa9.42□□□□□ -0.9
TRIO-213ENST00000509354 MYL6BP14649 208 aa9.42□□□□□ -0.9
TRIO-213ENST00000509354 PRR5LQ6MZQ0 368 aa9.42□□□□□ -0.9
TRIO-213ENST00000509354 TTLL7Q6ZT98 887 aa9.42□□□□□ -0.9
TRIO-213ENST00000509354 WDR63Q8IWG1 891 aa9.42□□□□□ -0.9
TRIO-213ENST00000509354 WWC1Q8IX03 1113 aa9.42□□□□□ -0.9
TRIO-213ENST00000509354 ZNF710Q8N1W2 664 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms