RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 ATG3Q9NT62 314 aa13.39□□□□□ -0.27
SH3RF1-203ENST00000508685 STAP2Q9UGK3 403 aa13.39□□□□□ -0.27
SH3RF1-203ENST00000508685 CCDC9Q9Y3X0 531 aaKnown RBP13.39□□□□□ -0.27
SH3RF1-203ENST00000508685 ITGB4P16144 1822 aa13.38□□□□□ -0.27
SH3RF1-203ENST00000508685 AFDNP55196 1824 aaKnown RBP13.38□□□□□ -0.27
SH3RF1-203ENST00000508685 WNK3Q9BYP7 1800 aa13.38□□□□□ -0.27
SH3RF1-203ENST00000508685 EXOC5O00471 708 aa13.38□□□□□ -0.27
SH3RF1-203ENST00000508685 ERC2O15083 957 aa13.38□□□□□ -0.27
SH3RF1-203ENST00000508685 UBE3BQ7Z3V4 1068 aa13.38□□□□□ -0.27
SH3RF1-203ENST00000508685 NRAPQ86VF7 1730 aa13.38□□□□□ -0.27
SH3RF1-203ENST00000508685 KLHDC4Q8TBB5 520 aa13.38□□□□□ -0.27
SH3RF1-203ENST00000508685 TRIM44Q96DX7 344 aaPredicted RBP13.38□□□□□ -0.27
SH3RF1-203ENST00000508685 RBM42Q9BTD8 480 aaKnown RBP13.38□□□□□ -0.27
SH3RF1-203ENST00000508685 PANK2Q9BZ23 570 aa13.38□□□□□ -0.27
SH3RF1-203ENST00000508685 HDAC5Q9UQL6 1122 aa13.38□□□□□ -0.27
SH3RF1-203ENST00000508685 TRIM6-TRIM34B2RNG4 842 aa13.37□□□□□ -0.27
SH3RF1-203ENST00000508685 HSP90AB4PQ58FF6 505 aa13.37□□□□□ -0.27
SH3RF1-203ENST00000508685 SYTL4Q96C24 671 aaPredicted RBP13.37□□□□□ -0.27
SH3RF1-203ENST00000508685 ZBTB3Q9H5J0 574 aa13.37□□□□□ -0.27
SH3RF1-203ENST00000508685 BCL9O00512 1426 aa13.37□□□□□ -0.27
SH3RF1-203ENST00000508685 EPB41L2O43491 1005 aaKnown RBP13.37□□□□□ -0.27
SH3RF1-203ENST00000508685 SSFA2P28290 1259 aa13.37□□□□□ -0.27
SH3RF1-203ENST00000508685 RILPL2Q969X0 211 aa13.37□□□□□ -0.27
SH3RF1-203ENST00000508685 SIL1Q9H173 461 aa13.37□□□□□ -0.27
SH3RF1-203ENST00000508685 ZNF330Q9Y3S2 320 aaPredicted RBP13.37□□□□□ -0.27
SH3RF1-203ENST00000508685 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.37□□□□□ -0.27
SH3RF1-203ENST00000508685 NUP188Q5SRE5 1749 aa13.37□□□□□ -0.27
SH3RF1-203ENST00000508685 SPATA31A1Q5TZJ5 1347 aa13.37□□□□□ -0.27
SH3RF1-203ENST00000508685 KAT6BQ8WYB5 2073 aa13.36□□□□□ -0.27
SH3RF1-203ENST00000508685 A0A087WZG4 1122 aa13.36□□□□□ -0.27
SH3RF1-203ENST00000508685 CYP2E1P05181 493 aaPredicted RBP13.36□□□□□ -0.27
SH3RF1-203ENST00000508685 CCDC173Q0VFZ6 552 aa13.36□□□□□ -0.27
SH3RF1-203ENST00000508685 DNAJC10Q8IXB1 793 aa13.36□□□□□ -0.27
SH3RF1-203ENST00000508685 PI4K2BQ8TCG2 481 aa13.36□□□□□ -0.27
SH3RF1-203ENST00000508685 DDX49Q9Y6V7 483 aaKnown RBP13.36□□□□□ -0.27
SH3RF1-203ENST00000508685 MAP4K4O95819 1239 aaPredicted RBP13.35□□□□□ -0.27
SH3RF1-203ENST00000508685 ARXQ96QS3 562 aa13.35□□□□□ -0.27
SH3RF1-203ENST00000508685 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.35□□□□□ -0.27
SH3RF1-203ENST00000508685 ESPNB1AK53 854 aa13.35□□□□□ -0.27
SH3RF1-203ENST00000508685 MCCP23508 829 aa13.35□□□□□ -0.27
SH3RF1-203ENST00000508685 ZNF445P59923 1031 aa13.35□□□□□ -0.27
SH3RF1-203ENST00000508685 SLC4A9Q96Q91 983 aa13.35□□□□□ -0.27
SH3RF1-203ENST00000508685 FOXD4L1Q9NU39 408 aa13.35□□□□□ -0.27
SH3RF1-203ENST00000508685 AOX1Q06278 1338 aa13.35□□□□□ -0.27
SH3RF1-203ENST00000508685 SASH1O94885 1247 aa13.34□□□□□ -0.27
SH3RF1-203ENST00000508685 CASP7P55210 303 aa13.34□□□□□ -0.27
SH3RF1-203ENST00000508685 ANAPC15P60006 121 aa13.34□□□□□ -0.27
SH3RF1-203ENST00000508685 CLASRPQ8N2M8 674 aaKnown RBP13.34□□□□□ -0.27
SH3RF1-203ENST00000508685 SPATA31A5Q5VU36 1347 aa13.34□□□□□ -0.27
SH3RF1-203ENST00000508685 SPATA31A7Q8IWB4 1347 aa13.34□□□□□ -0.27
SH3RF1-203ENST00000508685 DOT1LQ8TEK3 1739 aa13.34□□□□□ -0.27
SH3RF1-203ENST00000508685 PRIM1P49642 420 aaKnown RBP13.34□□□□□ -0.27
SH3RF1-203ENST00000508685 DDB1Q16531 1140 aa13.34□□□□□ -0.27
SH3RF1-203ENST00000508685 VSIG10Q8N0Z9 540 aa13.34□□□□□ -0.27
SH3RF1-203ENST00000508685 PPP1R9BQ96SB3 815 aa13.34□□□□□ -0.27
SH3RF1-203ENST00000508685 GAS2L3Q86XJ1 694 aa13.33□□□□□ -0.28
SH3RF1-203ENST00000508685 ERC1Q8IUD2 1116 aa13.33□□□□□ -0.28
SH3RF1-203ENST00000508685 TJP1Q07157 1748 aa13.32□□□□□ -0.28
SH3RF1-203ENST00000508685 A0A0G2JS52 829 aa13.32□□□□□ -0.28
SH3RF1-203ENST00000508685 ONECUT3O60422 494 aaPredicted RBP13.32□□□□□ -0.28
SH3RF1-203ENST00000508685 CHMLP26374 656 aa13.32□□□□□ -0.28
SH3RF1-203ENST00000508685 RABL6Q3YEC7 729 aaPredicted RBP13.32□□□□□ -0.28
SH3RF1-203ENST00000508685 G3BP1Q13283 466 aaKnown RBP eCLIP13.32□□□□□ -0.28
SH3RF1-203ENST00000508685 AACSQ86V21 672 aa13.32□□□□□ -0.28
SH3RF1-203ENST00000508685 IL17RAQ96F46 866 aa13.32□□□□□ -0.28
SH3RF1-203ENST00000508685 ESYT1Q9BSJ8 1104 aa13.32□□□□□ -0.28
SH3RF1-203ENST00000508685 IL25Q9H293 177 aa13.32□□□□□ -0.28
SH3RF1-203ENST00000508685 CWC25Q9NXE8 425 aaPredicted RBP13.32□□□□□ -0.28
SH3RF1-203ENST00000508685 THRAP3Q9Y2W1 955 aaKnown RBP13.32□□□□□ -0.28
SH3RF1-203ENST00000508685 USP42Q9H9J4 1324 aaKnown RBP13.31□□□□□ -0.28
SH3RF1-203ENST00000508685 STARD3NLO95772 234 aa13.31□□□□□ -0.28
SH3RF1-203ENST00000508685 IFIT2P09913 472 aaKnown RBP13.31□□□□□ -0.28
SH3RF1-203ENST00000508685 RFX5P48382 616 aaPredicted RBP13.31□□□□□ -0.28
SH3RF1-203ENST00000508685 NASPP49321 788 aaPredicted RBP13.31□□□□□ -0.28
SH3RF1-203ENST00000508685 FAM98CQ17RN3 349 aaKnown RBP13.31□□□□□ -0.28
SH3RF1-203ENST00000508685 HS1BP3Q53T59 392 aa13.31□□□□□ -0.28
SH3RF1-203ENST00000508685 SEPT12Q8IYM1 358 aa13.31□□□□□ -0.28
SH3RF1-203ENST00000508685 MARCH10Q8NA82 808 aaPredicted RBP13.31□□□□□ -0.28
SH3RF1-203ENST00000508685 EAF2Q96CJ1 260 aaPredicted RBP13.31□□□□□ -0.28
SH3RF1-203ENST00000508685 ACSBG1Q96GR2 724 aa13.31□□□□□ -0.28
SH3RF1-203ENST00000508685 TEX13AQ9BXU3 409 aaPredicted RBP13.31□□□□□ -0.28
SH3RF1-203ENST00000508685 TLR7Q9NYK1 1049 aaKnown RBP13.31□□□□□ -0.28
SH3RF1-203ENST00000508685 COL15A1P39059 1388 aa13.31□□□□□ -0.28
SH3RF1-203ENST00000508685 TTC41PQ6P2S7 1318 aa13.3□□□□□ -0.28
SH3RF1-203ENST00000508685 H7C1W4 665 aa13.3□□□□□ -0.28
SH3RF1-203ENST00000508685 PTPN12Q05209 780 aaKnown RBP13.3□□□□□ -0.28
SH3RF1-203ENST00000508685 MCTP1Q6DN14 999 aa13.3□□□□□ -0.28
SH3RF1-203ENST00000508685 LMBR1LQ6UX01 489 aa13.3□□□□□ -0.28
SH3RF1-203ENST00000508685 INTS4Q96HW7 963 aaKnown RBP13.3□□□□□ -0.28
SH3RF1-203ENST00000508685 CDCA7Q9BWT1 371 aaPredicted RBP13.3□□□□□ -0.28
SH3RF1-203ENST00000508685 LMBRD1Q9NUN5 540 aa13.3□□□□□ -0.28
SH3RF1-203ENST00000508685 CYP19A1P11511 503 aaPredicted RBP13.3□□□□□ -0.28
SH3RF1-203ENST00000508685 FOXO4P98177 505 aa13.3□□□□□ -0.28
SH3RF1-203ENST00000508685 CCDC191Q8NCU4 936 aa13.3□□□□□ -0.28
SH3RF1-203ENST00000508685 CCDC8Q9H0W5 538 aaPredicted RBP13.29□□□□□ -0.28
SH3RF1-203ENST00000508685 COPRSQ9NQ92 184 aa13.29□□□□□ -0.28
SH3RF1-203ENST00000508685 ECHDC1Q9NTX5 307 aa13.29□□□□□ -0.28
SH3RF1-203ENST00000508685 ZBTB1Q9Y2K1 713 aa13.29□□□□□ -0.28
SH3RF1-203ENST00000508685 CHMP3Q9Y3E7 222 aa13.29□□□□□ -0.28
SH3RF1-203ENST00000508685 AK9Q5TCS8 1911 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms