RNA–Protein interactions for RNA: ENST00000506951.5

PACRGL-217, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-217ENST00000506951 RPGRQ92834 1020 aaKnown RBP28.46■■■□□ 2.15
PACRGL-217ENST00000506951 CHPF2Q9P2E5 772 aa28.46■■■□□ 2.15
PACRGL-217ENST00000506951 NTSR2O95665 410 aa28.45■■■□□ 2.14
PACRGL-217ENST00000506951 GLTPD2A6NH11 291 aa28.44■■■□□ 2.14
PACRGL-217ENST00000506951 DPY19L2Q6NUT2 758 aa28.44■■■□□ 2.14
PACRGL-217ENST00000506951 RTKN2Q8IZC4 609 aa28.44■■■□□ 2.14
PACRGL-217ENST00000506951 UTP14AQ9BVJ6 771 aaKnown RBP28.44■■■□□ 2.14
PACRGL-217ENST00000506951 MRS2Q9HD23 443 aa28.44■■■□□ 2.14
PACRGL-217ENST00000506951 HYPKQ9NX55 129 aa28.44■■■□□ 2.14
PACRGL-217ENST00000506951 PRELPP51888 382 aa28.43■■■□□ 2.14
PACRGL-217ENST00000506951 C7orf43Q8WVR3 580 aa28.43■■■□□ 2.14
PACRGL-217ENST00000506951 HSPA6P17066 643 aa28.42■■■□□ 2.14
PACRGL-217ENST00000506951 RBM46Q8TBY0 533 aaKnown RBP28.42■■■□□ 2.14
PACRGL-217ENST00000506951 CCDC27Q2M243 656 aa28.41■■■□□ 2.14
PACRGL-217ENST00000506951 PLBD2Q8NHP8 589 aa28.41■■■□□ 2.14
PACRGL-217ENST00000506951 NLRP3Q96P20 1036 aa28.41■■■□□ 2.14
PACRGL-217ENST00000506951 HOXA10P31260 410 aaPredicted RBP28.4■■■□□ 2.14
PACRGL-217ENST00000506951 TCIRG1Q13488 830 aa28.4■■■□□ 2.14
PACRGL-217ENST00000506951 GRIPAP1Q4V328 841 aa28.4■■■□□ 2.14
PACRGL-217ENST00000506951 CCDC184Q52MB2 194 aa28.4■■■□□ 2.14
PACRGL-217ENST00000506951 CC2D2BQ6DHV5 1058 aa28.4■■■□□ 2.14
PACRGL-217ENST00000506951 RBM17Q96I25 401 aaKnown RBP28.4■■■□□ 2.14
PACRGL-217ENST00000506951 FKBP4Q02790 459 aaKnown RBP eCLIP28.39■■■□□ 2.14
PACRGL-217ENST00000506951 NCBP3Q53F19 620 aaKnown RBP28.39■■■□□ 2.14
PACRGL-217ENST00000506951 RRAGCQ9HB90 399 aa28.39■■■□□ 2.14
PACRGL-217ENST00000506951 WDR90Q96KV7 1748 aa28.38■■■□□ 2.13
PACRGL-217ENST00000506951 ANKRD13DQ6ZTN6 518 aa28.38■■■□□ 2.13
PACRGL-217ENST00000506951 CRAMP1Q96RY5 1269 aa28.38■■■□□ 2.13
PACRGL-217ENST00000506951 VEGFAP15692 232 aaPredicted RBP28.37■■■□□ 2.13
PACRGL-217ENST00000506951 SLC10A5Q5PT55 438 aa28.37■■■□□ 2.13
PACRGL-217ENST00000506951 NLRP10Q86W26 655 aa28.37■■■□□ 2.13
PACRGL-217ENST00000506951 TMX4Q9H1E5 349 aaPredicted RBP28.36■■■□□ 2.13
PACRGL-217ENST00000506951 FSTL1Q12841 308 aa28.35■■■□□ 2.13
PACRGL-217ENST00000506951 TRMT112Q9UI30 125 aaKnown RBP28.35■■■□□ 2.13
PACRGL-217ENST00000506951 SH3TC1Q8TE82 1336 aa28.35■■■□□ 2.13
PACRGL-217ENST00000506951 LAMB2P55268 1798 aa28.34■■■□□ 2.13
PACRGL-217ENST00000506951 GOLGA2Q08379 1002 aa28.34■■■□□ 2.13
PACRGL-217ENST00000506951 PSMD1Q99460 953 aa28.34■■■□□ 2.13
PACRGL-217ENST00000506951 PPEF1O14829 653 aaPredicted RBP28.32■■■□□ 2.12
PACRGL-217ENST00000506951 APLP1P51693 650 aa28.32■■■□□ 2.12
PACRGL-217ENST00000506951 CCDC30Q5VVM6 783 aa28.32■■■□□ 2.12
PACRGL-217ENST00000506951 IL16Q14005 1332 aa28.32■■■□□ 2.12
PACRGL-217ENST00000506951 WWC1Q8IX03 1113 aa28.31■■■□□ 2.12
PACRGL-217ENST00000506951 SMC1BQ8NDV3 1235 aa28.31■■■□□ 2.12
PACRGL-217ENST00000506951 ELL2O00472 640 aaPredicted RBP28.3■■■□□ 2.12
PACRGL-217ENST00000506951 ZNF277Q9NRM2 450 aaPredicted RBP28.3■■■□□ 2.12
PACRGL-217ENST00000506951 IARSP41252 1262 aaKnown RBP28.29■■■□□ 2.12
PACRGL-217ENST00000506951 RIC3Q7Z5B4 369 aa28.29■■■□□ 2.12
PACRGL-217ENST00000506951 C8orf58Q8NAV2 365 aa28.29■■■□□ 2.12
PACRGL-217ENST00000506951 ISCA1Q9BUE6 129 aa28.29■■■□□ 2.12
PACRGL-217ENST00000506951 SNED1Q8TER0 1413 aa28.28■■■□□ 2.12
PACRGL-217ENST00000506951 DDX58O95786 925 aaKnown RBP28.28■■■□□ 2.12
PACRGL-217ENST00000506951 OLFM4Q6UX06 510 aa28.28■■■□□ 2.12
PACRGL-217ENST00000506951 SYNE4Q8N205 404 aa28.28■■■□□ 2.12
PACRGL-217ENST00000506951 SCN4AP35499 1836 aa28.27■■■□□ 2.12
PACRGL-217ENST00000506951 DDX60Q8IY21 1712 aaKnown RBP28.27■■■□□ 2.12
PACRGL-217ENST00000506951 C3orf67Q6ZVT6 689 aa28.27■■■□□ 2.12
PACRGL-217ENST00000506951 JDP2Q8WYK2 163 aa28.27■■■□□ 2.12
PACRGL-217ENST00000506951 IQCA1LA6NCM1 817 aa28.26■■■□□ 2.11
PACRGL-217ENST00000506951 HSP90B1P14625 803 aaKnown RBP28.26■■■□□ 2.11
PACRGL-217ENST00000506951 TRIM28Q13263 835 aaKnown RBP28.26■■■□□ 2.11
PACRGL-217ENST00000506951 DDX46Q7L014 1031 aaKnown RBP28.26■■■□□ 2.11
PACRGL-217ENST00000506951 ABCC4O15439 1325 aa28.25■■■□□ 2.11
PACRGL-217ENST00000506951 BBOX1O75936 387 aa28.25■■■□□ 2.11
PACRGL-217ENST00000506951 HCLS1P14317 486 aaPredicted RBP28.25■■■□□ 2.11
PACRGL-217ENST00000506951 TSR2Q969E8 191 aaKnown RBP28.25■■■□□ 2.11
PACRGL-217ENST00000506951 STK31Q9BXU1 1019 aa28.25■■■□□ 2.11
PACRGL-217ENST00000506951 TMC4Q7Z404 712 aa28.24■■■□□ 2.11
PACRGL-217ENST00000506951 ATP6V0A2Q9Y487 856 aa28.24■■■□□ 2.11
PACRGL-217ENST00000506951 CEP350Q5VT06 3117 aa28.23■■■□□ 2.11
PACRGL-217ENST00000506951 CACNA1FO60840 1977 aa28.23■■■□□ 2.11
PACRGL-217ENST00000506951 ATP5J2-PTCD1G3V325 749 aa28.23■■■□□ 2.11
PACRGL-217ENST00000506951 DDNO94850 711 aaPredicted RBP28.23■■■□□ 2.11
PACRGL-217ENST00000506951 PHAXQ9H814 394 aaKnown RBP28.23■■■□□ 2.11
PACRGL-217ENST00000506951 WDR63Q8IWG1 891 aa28.22■■■□□ 2.11
PACRGL-217ENST00000506951 SUPT20HQ8NEM7 779 aa28.22■■■□□ 2.11
PACRGL-217ENST00000506951 L3MBTL3Q96JM7 780 aaPredicted RBP28.22■■■□□ 2.11
PACRGL-217ENST00000506951 VPS33BQ9H267 617 aa28.22■■■□□ 2.11
PACRGL-217ENST00000506951 TWISTNBQ3B726 338 aaPredicted RBP28.21■■■□□ 2.11
PACRGL-217ENST00000506951 POTECB2RU33 542 aa28.2■■■□□ 2.1
PACRGL-217ENST00000506951 FZD9O00144 591 aa28.2■■■□□ 2.1
PACRGL-217ENST00000506951 GRAPQ13588 217 aa28.2■■■□□ 2.1
PACRGL-217ENST00000506951 TSPYL6Q8N831 410 aa28.2■■■□□ 2.1
PACRGL-217ENST00000506951 GRAPLQ8TC17 118 aaPredicted RBP28.2■■■□□ 2.1
PACRGL-217ENST00000506951 FAM89AQ96GI7 184 aa28.2■■■□□ 2.1
PACRGL-217ENST00000506951 TCERG1O14776 1098 aaKnown RBP28.19■■■□□ 2.1
PACRGL-217ENST00000506951 SP8Q8IXZ3 490 aa28.19■■■□□ 2.1
PACRGL-217ENST00000506951 CCDC191Q8NCU4 936 aa28.19■■■□□ 2.1
PACRGL-217ENST00000506951 EIF6P56537 245 aaKnown RBP28.18■■■□□ 2.1
PACRGL-217ENST00000506951 LARGE2Q8N3Y3 721 aa28.18■■■□□ 2.1
PACRGL-217ENST00000506951 ZBTB38Q8NAP3 1195 aaPredicted RBP28.18■■■□□ 2.1
PACRGL-217ENST00000506951 MYD88Q99836 296 aa28.18■■■□□ 2.1
PACRGL-217ENST00000506951 ZNF541Q9H0D2 1346 aa28.18■■■□□ 2.1
PACRGL-217ENST00000506951 IRS4O14654 1257 aaPredicted RBP28.17■■■□□ 2.1
PACRGL-217ENST00000506951 SF3B3Q15393 1217 aaKnown RBP28.17■■■□□ 2.1
PACRGL-217ENST00000506951 GPC2Q8N158 579 aa28.17■■■□□ 2.1
PACRGL-217ENST00000506951 METTL22Q9BUU2 404 aaPredicted RBP28.17■■■□□ 2.1
PACRGL-217ENST00000506951 LRRC37AA6NMS7 1700 aa28.17■■■□□ 2.1
PACRGL-217ENST00000506951 FANCIQ9NVI1 1328 aa28.17■■■□□ 2.1
PACRGL-217ENST00000506951 DPP8Q6V1X1 898 aaPredicted RBP28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms