RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 UTP14AQ9BVJ6 771 aaKnown RBP22.95■■□□□ 1.26
SMN1-204ENST00000506163 CHMP4AQ9BY43 222 aa22.95■■□□□ 1.26
SMN1-204ENST00000506163 ARFGEF1Q9Y6D6 1849 aa22.95■■□□□ 1.26
SMN1-204ENST00000506163 TNRC6CQ9HCJ0 1690 aaKnown RBP22.95■■□□□ 1.26
SMN1-204ENST00000506163 RIC3Q7Z5B4 369 aa22.94■■□□□ 1.26
SMN1-204ENST00000506163 STK31Q9BXU1 1019 aa22.94■■□□□ 1.26
SMN1-204ENST00000506163 PDZRN3Q9UPQ7 1066 aa22.94■■□□□ 1.26
SMN1-204ENST00000506163 E9PSI1 815 aa22.93■■□□□ 1.26
SMN1-204ENST00000506163 STYK1Q6J9G0 422 aa22.93■■□□□ 1.26
SMN1-204ENST00000506163 ARHGAP27Q6ZUM4 889 aa22.93■■□□□ 1.26
SMN1-204ENST00000506163 TRMT2AQ8IZ69 625 aaKnown RBP22.93■■□□□ 1.26
SMN1-204ENST00000506163 ARFGEF2Q9Y6D5 1785 aa22.93■■□□□ 1.26
SMN1-204ENST00000506163 ADCY9O60503 1353 aa22.92■■□□□ 1.26
SMN1-204ENST00000506163 CRY2Q49AN0 593 aa22.92■■□□□ 1.26
SMN1-204ENST00000506163 SLC10A5Q5PT55 438 aa22.92■■□□□ 1.26
SMN1-204ENST00000506163 MASTLQ96GX5 879 aa22.92■■□□□ 1.26
SMN1-204ENST00000506163 SLX4Q8IY92 1834 aa22.92■■□□□ 1.26
SMN1-204ENST00000506163 TRIM28Q13263 835 aaKnown RBP22.91■■□□□ 1.26
SMN1-204ENST00000506163 PI4KAP2A4QPH2 592 aa22.91■■□□□ 1.26
SMN1-204ENST00000506163 KSR2Q6VAB6 950 aa22.91■■□□□ 1.26
SMN1-204ENST00000506163 PI4KAP1Q8N8J0 262 aa22.91■■□□□ 1.26
SMN1-204ENST00000506163 MYD88Q99836 296 aa22.91■■□□□ 1.26
SMN1-204ENST00000506163 METTL22Q9BUU2 404 aaPredicted RBP22.91■■□□□ 1.26
SMN1-204ENST00000506163 TRMT112Q9UI30 125 aaKnown RBP22.91■■□□□ 1.26
SMN1-204ENST00000506163 MAP3K2Q9Y2U5 619 aa22.91■■□□□ 1.26
SMN1-204ENST00000506163 HCLS1P14317 486 aaPredicted RBP22.9■■□□□ 1.26
SMN1-204ENST00000506163 NPR1P16066 1061 aa22.9■■□□□ 1.26
SMN1-204ENST00000506163 FLIIQ13045 1269 aa22.9■■□□□ 1.26
SMN1-204ENST00000506163 RIC1Q4ADV7 1423 aa22.89■■□□□ 1.25
SMN1-204ENST00000506163 C7orf43Q8WVR3 580 aa22.89■■□□□ 1.25
SMN1-204ENST00000506163 CNKSR1Q969H4 720 aa22.89■■□□□ 1.25
SMN1-204ENST00000506163 ZNF219Q9P2Y4 722 aaPredicted RBP22.89■■□□□ 1.25
SMN1-204ENST00000506163 DDX58O95786 925 aaKnown RBP22.88■■□□□ 1.25
SMN1-204ENST00000506163 PRPF40BQ6NWY9 871 aaKnown RBP22.88■■□□□ 1.25
SMN1-204ENST00000506163 FAM89AQ96GI7 184 aa22.88■■□□□ 1.25
SMN1-204ENST00000506163 C21orf2O43822 256 aa22.87■■□□□ 1.25
SMN1-204ENST00000506163 IGKV5-2P06315 115 aa22.87■■□□□ 1.25
SMN1-204ENST00000506163 PRELPP51888 382 aa22.87■■□□□ 1.25
SMN1-204ENST00000506163 CACNA1FO60840 1977 aa22.87■■□□□ 1.25
SMN1-204ENST00000506163 SH3TC1Q8TE82 1336 aa22.87■■□□□ 1.25
SMN1-204ENST00000506163 RTL5Q5HYW3 569 aaPredicted RBP22.86■■□□□ 1.25
SMN1-204ENST00000506163 SLC51AQ86UW1 340 aa22.86■■□□□ 1.25
SMN1-204ENST00000506163 RNF123Q5XPI4 1314 aa22.86■■□□□ 1.25
SMN1-204ENST00000506163 HOXA10P31260 410 aaPredicted RBP22.85■■□□□ 1.25
SMN1-204ENST00000506163 OLFM4Q6UX06 510 aa22.85■■□□□ 1.25
SMN1-204ENST00000506163 JARID2Q92833 1246 aaPredicted RBP22.85■■□□□ 1.25
SMN1-204ENST00000506163 CACNA1SQ13698 1873 aa22.85■■□□□ 1.25
SMN1-204ENST00000506163 RASSF7Q02833 373 aa22.84■■□□□ 1.25
SMN1-204ENST00000506163 ZNF784Q8NCA9 323 aaPredicted RBP22.84■■□□□ 1.25
SMN1-204ENST00000506163 NLRP3Q96P20 1036 aa22.84■■□□□ 1.25
SMN1-204ENST00000506163 NFKBIEO00221 500 aa22.83■■□□□ 1.25
SMN1-204ENST00000506163 HNRNPUQ00839 825 aaKnown RBP eCLIP22.83■■□□□ 1.25
SMN1-204ENST00000506163 FKBP5Q13451 457 aaPredicted RBP22.83■■□□□ 1.25
SMN1-204ENST00000506163 CCDC191Q8NCU4 936 aa22.83■■□□□ 1.25
SMN1-204ENST00000506163 F6X3S4 739 aa22.82■■□□□ 1.24
SMN1-204ENST00000506163 CWF19L2Q2TBE0 894 aaKnown RBP22.82■■□□□ 1.24
SMN1-204ENST00000506163 SBF1O95248 1867 aa22.82■■□□□ 1.24
SMN1-204ENST00000506163 LAMB2P55268 1798 aa22.82■■□□□ 1.24
SMN1-204ENST00000506163 MRPL50Q8N5N7 158 aaKnown RBP22.82■■□□□ 1.24
SMN1-204ENST00000506163 ZBTB38Q8NAP3 1195 aaPredicted RBP22.82■■□□□ 1.24
SMN1-204ENST00000506163 SSH1Q8WYL5 1049 aa22.82■■□□□ 1.24
SMN1-204ENST00000506163 RPGRQ92834 1020 aaKnown RBP22.82■■□□□ 1.24
SMN1-204ENST00000506163 CWC25Q9NXE8 425 aaPredicted RBP22.82■■□□□ 1.24
SMN1-204ENST00000506163 DDX60Q8IY21 1712 aaKnown RBP22.81■■□□□ 1.24
SMN1-204ENST00000506163 ALDH1B1P30837 517 aa22.81■■□□□ 1.24
SMN1-204ENST00000506163 C9orf131Q5VYM1 1079 aa22.81■■□□□ 1.24
SMN1-204ENST00000506163 DNAAF4Q8WXU2 420 aa22.81■■□□□ 1.24
SMN1-204ENST00000506163 CRAMP1Q96RY5 1269 aa22.81■■□□□ 1.24
SMN1-204ENST00000506163 NEURL1BA8MQ27 555 aa22.8■■□□□ 1.24
SMN1-204ENST00000506163 IRS4O14654 1257 aaPredicted RBP22.8■■□□□ 1.24
SMN1-204ENST00000506163 PCCAP05165 728 aaPredicted RBP22.79■■□□□ 1.24
SMN1-204ENST00000506163 RBM17Q96I25 401 aaKnown RBP22.79■■□□□ 1.24
SMN1-204ENST00000506163 FER1L6Q2WGJ9 1857 aa22.79■■□□□ 1.24
SMN1-204ENST00000506163 BCL2L13Q9BXK5 485 aa22.78■■□□□ 1.24
SMN1-204ENST00000506163 TAF1P21675 1872 aa22.77■■□□□ 1.24
SMN1-204ENST00000506163 ABCC4O15439 1325 aa22.77■■□□□ 1.24
SMN1-204ENST00000506163 SF3B3Q15393 1217 aaKnown RBP22.77■■□□□ 1.24
SMN1-204ENST00000506163 NEXNQ0ZGT2 675 aa22.76■■□□□ 1.23
SMN1-204ENST00000506163 BEND3Q5T5X7 828 aa22.76■■□□□ 1.23
SMN1-204ENST00000506163 RNF181Q9P0P0 153 aa22.76■■□□□ 1.23
SMN1-204ENST00000506163 SNED1Q8TER0 1413 aa22.76■■□□□ 1.23
SMN1-204ENST00000506163 COL4A1P02462 1669 aa22.75■■□□□ 1.23
SMN1-204ENST00000506163 H7C1W4 665 aa22.75■■□□□ 1.23
SMN1-204ENST00000506163 GCKRQ14397 625 aa22.75■■□□□ 1.23
SMN1-204ENST00000506163 LINS1Q8NG48 757 aa22.75■■□□□ 1.23
SMN1-204ENST00000506163 LTBP3Q9NS15 1303 aa22.74■■□□□ 1.23
SMN1-204ENST00000506163 CCDC88AQ3V6T2 1871 aa22.74■■□□□ 1.23
SMN1-204ENST00000506163 LMNB1P20700 586 aa22.74■■□□□ 1.23
SMN1-204ENST00000506163 CASP7P55210 303 aa22.74■■□□□ 1.23
SMN1-204ENST00000506163 CCDC93Q567U6 631 aa22.74■■□□□ 1.23
SMN1-204ENST00000506163 CDHR2Q9BYE9 1310 aa22.73■■□□□ 1.23
SMN1-204ENST00000506163 PPEF1O14829 653 aaPredicted RBP22.73■■□□□ 1.23
SMN1-204ENST00000506163 ALDH1L2Q3SY69 923 aa22.73■■□□□ 1.23
SMN1-204ENST00000506163 SOGA3Q5TF21 947 aa22.73■■□□□ 1.23
SMN1-204ENST00000506163 DDX46Q7L014 1031 aaKnown RBP22.73■■□□□ 1.23
SMN1-204ENST00000506163 TAOK3Q9H2K8 898 aa22.73■■□□□ 1.23
SMN1-204ENST00000506163 PDE8AO60658 829 aa22.72■■□□□ 1.23
SMN1-204ENST00000506163 CT47B1P0C2W7 299 aaPredicted RBP22.72■■□□□ 1.23
SMN1-204ENST00000506163 GRAPQ13588 217 aa22.72■■□□□ 1.23
SMN1-204ENST00000506163 UBE3BQ7Z3V4 1068 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms