RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 A0A1W2PPC1 479 aa4.89□□□□□ -1.63
TCOF1-208ENST00000506063 SHTN1A0MZ66 631 aa4.89□□□□□ -1.63
TCOF1-208ENST00000506063 KLRG2A4D1S0 409 aaPredicted RBP4.89□□□□□ -1.63
TCOF1-208ENST00000506063 ERVV-2B6SEH9 535 aa4.89□□□□□ -1.63
TCOF1-208ENST00000506063 PTCD1O75127 700 aaKnown RBP4.89□□□□□ -1.63
TCOF1-208ENST00000506063 ZNF157P51786 506 aaPredicted RBP4.89□□□□□ -1.63
TCOF1-208ENST00000506063 CDC37L1Q7L3B6 337 aa4.89□□□□□ -1.63
TCOF1-208ENST00000506063 OTOP1Q7RTM1 612 aa4.89□□□□□ -1.63
TCOF1-208ENST00000506063 IFNL2Q8IZJ0 200 aa4.89□□□□□ -1.63
TCOF1-208ENST00000506063 DEFB123Q8N688 67 aa4.89□□□□□ -1.63
TCOF1-208ENST00000506063 TRPM4Q8TD43 1214 aa4.89□□□□□ -1.63
TCOF1-208ENST00000506063 ZC3H15Q8WU90 426 aaKnown RBP4.89□□□□□ -1.63
TCOF1-208ENST00000506063 FAM122AQ96E09 287 aa4.89□□□□□ -1.63
TCOF1-208ENST00000506063 MASTLQ96GX5 879 aa4.89□□□□□ -1.63
TCOF1-208ENST00000506063 GBA2Q9HCG7 927 aaPredicted RBP4.89□□□□□ -1.63
TCOF1-208ENST00000506063 ZBTB1Q9Y2K1 713 aa4.89□□□□□ -1.63
TCOF1-208ENST00000506063 TAF1P21675 1872 aa4.88□□□□□ -1.63
TCOF1-208ENST00000506063 SSC5DA1L4H1 1573 aa4.88□□□□□ -1.63
TCOF1-208ENST00000506063 CYP19A1P11511 503 aaPredicted RBP4.88□□□□□ -1.63
TCOF1-208ENST00000506063 UBE2Q1Q7Z7E8 422 aa4.88□□□□□ -1.63
TCOF1-208ENST00000506063 USP48Q86UV5 1035 aa4.88□□□□□ -1.63
TCOF1-208ENST00000506063 DNAJC10Q8IXB1 793 aa4.88□□□□□ -1.63
TCOF1-208ENST00000506063 REM2Q8IYK8 340 aaPredicted RBP4.88□□□□□ -1.63
TCOF1-208ENST00000506063 RTKN2Q8IZC4 609 aa4.88□□□□□ -1.63
TCOF1-208ENST00000506063 ZNF333Q96JL9 665 aa4.88□□□□□ -1.63
TCOF1-208ENST00000506063 PSMD1Q99460 953 aa4.88□□□□□ -1.63
TCOF1-208ENST00000506063 SLC12A5Q9H2X9 1139 aa4.88□□□□□ -1.63
TCOF1-208ENST00000506063 SPG7Q9UQ90 795 aa4.88□□□□□ -1.63
TCOF1-208ENST00000506063 MUC6Q6W4X9 2439 aa4.88□□□□□ -1.63
TCOF1-208ENST00000506063 FLT4P35916 1363 aa4.88□□□□□ -1.63
TCOF1-208ENST00000506063 ZSWIM8A7E2V4 1837 aa4.88□□□□□ -1.63
TCOF1-208ENST00000506063 ZNF609O15014 1411 aa4.88□□□□□ -1.63
TCOF1-208ENST00000506063 FKTNO75072 461 aa4.87□□□□□ -1.63
TCOF1-208ENST00000506063 TM4SF4P48230 202 aa4.87□□□□□ -1.63
TCOF1-208ENST00000506063 EIF6P56537 245 aaKnown RBP4.87□□□□□ -1.63
TCOF1-208ENST00000506063 SHISA4Q96DD7 197 aa4.87□□□□□ -1.63
TCOF1-208ENST00000506063 PTPN22Q9Y2R2 807 aa4.87□□□□□ -1.63
TCOF1-208ENST00000506063 KIF20BQ96Q89 1820 aa4.87□□□□□ -1.63
TCOF1-208ENST00000506063 KIF24Q5T7B8 1368 aa4.87□□□□□ -1.63
TCOF1-208ENST00000506063 WTIPA6NIX2 430 aaPredicted RBP4.86□□□□□ -1.63
TCOF1-208ENST00000506063 ADM5C9JUS6 153 aa4.86□□□□□ -1.63
TCOF1-208ENST00000506063 ZBTB7BO15156 539 aaPredicted RBP4.86□□□□□ -1.63
TCOF1-208ENST00000506063 EGFRP00533 1210 aa4.86□□□□□ -1.63
TCOF1-208ENST00000506063 GMPSP49915 693 aaPredicted RBP4.86□□□□□ -1.63
TCOF1-208ENST00000506063 EIF5P55010 431 aaKnown RBP4.86□□□□□ -1.63
TCOF1-208ENST00000506063 PPARGC1BQ86YN6 1023 aaKnown RBP4.86□□□□□ -1.63
TCOF1-208ENST00000506063 JDP2Q8WYK2 163 aa4.86□□□□□ -1.63
TCOF1-208ENST00000506063 GUCD1Q96NT3 240 aa4.86□□□□□ -1.63
TCOF1-208ENST00000506063 TRIM17Q9Y577 477 aa4.86□□□□□ -1.63
TCOF1-208ENST00000506063 NPC1L1Q9UHC9 1359 aa4.86□□□□□ -1.63
TCOF1-208ENST00000506063 NPR1P16066 1061 aa4.85□□□□□ -1.63
TCOF1-208ENST00000506063 CXCL9Q07325 125 aa4.85□□□□□ -1.63
TCOF1-208ENST00000506063 MAP3K12Q12852 859 aa4.85□□□□□ -1.63
TCOF1-208ENST00000506063 ANKRD13DQ6ZTN6 518 aa4.85□□□□□ -1.63
TCOF1-208ENST00000506063 C2orf69Q8N8R5 385 aa4.85□□□□□ -1.63
TCOF1-208ENST00000506063 CNBD1Q8NA66 436 aa4.85□□□□□ -1.63
TCOF1-208ENST00000506063 COG3Q96JB2 828 aa4.85□□□□□ -1.63
TCOF1-208ENST00000506063 EYA1Q99502 592 aa4.85□□□□□ -1.63
TCOF1-208ENST00000506063 CDHR2Q9BYE9 1310 aa4.85□□□□□ -1.63
TCOF1-208ENST00000506063 SCN9AQ15858 1988 aa4.85□□□□□ -1.63
TCOF1-208ENST00000506063 COL2A1P02458 1487 aaPredicted RBP4.84□□□□□ -1.63
TCOF1-208ENST00000506063 RPTORQ8N122 1335 aa4.84□□□□□ -1.63
TCOF1-208ENST00000506063 KRT26Q7Z3Y9 468 aa4.84□□□□□ -1.63
TCOF1-208ENST00000506063 HDGFL2Q7Z4V5 671 aaPredicted RBP4.84□□□□□ -1.63
TCOF1-208ENST00000506063 ZBTB12Q9Y330 459 aaPredicted RBP4.84□□□□□ -1.63
TCOF1-208ENST00000506063 BDP1A6H8Y1 2624 aa4.84□□□□□ -1.63
TCOF1-208ENST00000506063 FYB1O15117 783 aa4.83□□□□□ -1.64
TCOF1-208ENST00000506063 CAMTA2O94983 1202 aa4.83□□□□□ -1.64
TCOF1-208ENST00000506063 CABP4P57796 275 aa4.83□□□□□ -1.64
TCOF1-208ENST00000506063 LRIT3Q3SXY7 679 aa4.83□□□□□ -1.64
TCOF1-208ENST00000506063 MOB2Q70IA6 237 aa4.83□□□□□ -1.64
TCOF1-208ENST00000506063 LARGE2Q8N3Y3 721 aa4.83□□□□□ -1.64
TCOF1-208ENST00000506063 NFATC2IPQ8NCF5 419 aa4.83□□□□□ -1.64
TCOF1-208ENST00000506063 GDF15Q99988 308 aa4.83□□□□□ -1.64
TCOF1-208ENST00000506063 STAP2Q9UGK3 403 aa4.83□□□□□ -1.64
TCOF1-208ENST00000506063 DUOX1Q9NRD9 1551 aa4.82□□□□□ -1.64
TCOF1-208ENST00000506063 RIC1Q4ADV7 1423 aa4.82□□□□□ -1.64
TCOF1-208ENST00000506063 ASTN2O75129 1339 aaPredicted RBP4.82□□□□□ -1.64
TCOF1-208ENST00000506063 PSME4Q14997 1843 aa4.82□□□□□ -1.64
TCOF1-208ENST00000506063 YDJCA8MPS7 323 aa4.82□□□□□ -1.64
TCOF1-208ENST00000506063 TNFRSF10AO00220 468 aa4.82□□□□□ -1.64
TCOF1-208ENST00000506063 BMP8BP34820 402 aa4.82□□□□□ -1.64
TCOF1-208ENST00000506063 ST5P78524 1137 aa4.82□□□□□ -1.64
TCOF1-208ENST00000506063 CRY2Q49AN0 593 aa4.82□□□□□ -1.64
TCOF1-208ENST00000506063 SAMD7Q7Z3H4 446 aa4.82□□□□□ -1.64
TCOF1-208ENST00000506063 CD99L2Q8TCZ2 262 aa4.82□□□□□ -1.64
TCOF1-208ENST00000506063 DPF3Q92784 378 aa4.82□□□□□ -1.64
TCOF1-208ENST00000506063 CDCA5Q96FF9 252 aa4.82□□□□□ -1.64
TCOF1-208ENST00000506063 TMEM106CQ9BVX2 250 aa4.82□□□□□ -1.64
TCOF1-208ENST00000506063 TERF2IPQ9NYB0 399 aa4.82□□□□□ -1.64
TCOF1-208ENST00000506063 CNOT7Q9UIV1 285 aaKnown RBP4.82□□□□□ -1.64
TCOF1-208ENST00000506063 ARIH1Q9Y4X5 557 aaPredicted RBP4.82□□□□□ -1.64
TCOF1-208ENST00000506063 EMILIN1Q9Y6C2 1016 aa4.82□□□□□ -1.64
TCOF1-208ENST00000506063 CFAP54Q96N23 3096 aa4.82□□□□□ -1.64
TCOF1-208ENST00000506063 WDFY4Q6ZS81 3184 aa4.81□□□□□ -1.64
TCOF1-208ENST00000506063 SIPA1L3O60292 1781 aaPredicted RBP4.81□□□□□ -1.64
TCOF1-208ENST00000506063 TMEM265A0A087WTH1 108 aa4.81□□□□□ -1.64
TCOF1-208ENST00000506063 POTEB2H3BUK9 544 aa4.81□□□□□ -1.64
TCOF1-208ENST00000506063 HSP90AB1P08238 724 aaKnown RBP4.81□□□□□ -1.64
TCOF1-208ENST00000506063 CANXP27824 592 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms