RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 PUF60Q9UHX1 559 aaKnown RBP9.18□□□□□ -0.94
ATP2C1-208ENST00000504948 QSER1Q2KHR3 1735 aa9.18□□□□□ -0.94
ATP2C1-208ENST00000504948 CCT2P78371 535 aaKnown RBP9.18□□□□□ -0.94
ATP2C1-208ENST00000504948 PPP1R9BQ96SB3 815 aa9.18□□□□□ -0.94
ATP2C1-208ENST00000504948 FSD1Q9BTV5 496 aa9.18□□□□□ -0.94
ATP2C1-208ENST00000504948 MEIS3Q99687 375 aa9.17□□□□□ -0.94
ATP2C1-208ENST00000504948 FAM170AA1A519 330 aa9.17□□□□□ -0.94
ATP2C1-208ENST00000504948 LMOD1P29536 600 aaPredicted RBP9.17□□□□□ -0.94
ATP2C1-208ENST00000504948 ARID5BQ14865 1188 aa9.17□□□□□ -0.94
ATP2C1-208ENST00000504948 KARSQ15046 597 aaKnown RBP9.17□□□□□ -0.94
ATP2C1-208ENST00000504948 EPC1Q9H2F5 836 aa9.17□□□□□ -0.94
ATP2C1-208ENST00000504948 GNG11P61952 73 aa9.17□□□□□ -0.94
ATP2C1-208ENST00000504948 NUCB1Q02818 461 aa9.17□□□□□ -0.94
ATP2C1-208ENST00000504948 RIMS2Q9UQ26 1411 aa9.17□□□□□ -0.94
ATP2C1-208ENST00000504948 RREB1Q92766 1687 aa9.17□□□□□ -0.94
ATP2C1-208ENST00000504948 TNS1Q9HBL0 1735 aaKnown RBP9.17□□□□□ -0.94
ATP2C1-208ENST00000504948 MCM5P33992 734 aa9.17□□□□□ -0.94
ATP2C1-208ENST00000504948 PDRG1Q9NUG6 133 aa9.17□□□□□ -0.94
ATP2C1-208ENST00000504948 PER1O15534 1290 aaPredicted RBP9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 SEC31AO94979 1220 aaKnown RBP9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 ANXA1P04083 346 aa9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 MATR3P43243 847 aaKnown RBP eCLIP9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 FAM160A1Q05DH4 1040 aa9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 RNF187Q5TA31 235 aaPredicted RBP9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 NEUROD6Q96NK8 337 aa9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 RASSF4Q9H2L5 321 aa9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 RAI14Q9P0K7 980 aa9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 RHOXF2BP0C7M4 288 aa9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 STK38Q15208 465 aa9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 RHOXF2Q9BQY4 288 aa9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 SRCIN1Q9C0H9 1055 aa9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 CDK12Q9NYV4 1490 aaPredicted RBP9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 FRMD3A2A2Y4 597 aa9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 IRX5P78411 483 aaPredicted RBP9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 RUFY1Q96T51 708 aa9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 ZNF500O60304 480 aaPredicted RBP9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 BMS1Q14692 1282 aaKnown RBP9.16□□□□□ -0.94
ATP2C1-208ENST00000504948 CCDC69A6NI79 296 aa9.15□□□□□ -0.94
ATP2C1-208ENST00000504948 POLR3DP05423 398 aaPredicted RBP9.15□□□□□ -0.94
ATP2C1-208ENST00000504948 CYP46A1Q9Y6A2 500 aa9.15□□□□□ -0.94
ATP2C1-208ENST00000504948 SHANK3Q9BYB0 1731 aa9.15□□□□□ -0.94
ATP2C1-208ENST00000504948 UBTFL1P0CB47 393 aaPredicted RBP9.15□□□□□ -0.94
ATP2C1-208ENST00000504948 TYRO3Q06418 890 aa9.15□□□□□ -0.95
ATP2C1-208ENST00000504948 SYNE3Q6ZMZ3 975 aa9.15□□□□□ -0.95
ATP2C1-208ENST00000504948 CEP57Q86XR8 500 aa9.15□□□□□ -0.95
ATP2C1-208ENST00000504948 AOPEPQ8N6M6 819 aa9.15□□□□□ -0.95
ATP2C1-208ENST00000504948 RAB11FIP3O75154 756 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 ECM2O94769 699 aaPredicted RBP9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 LRRCC1Q9C099 1032 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 MX1P20591 662 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 HNRNPH2P55795 449 aaKnown RBP9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 GOLGA8FQ08AF8 430 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 GOLGA8DPQ0D2H9 430 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 KIF4BQ2VIQ3 1234 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 CERKQ8TCT0 537 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 DNAAF4Q8WXU2 420 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 PALD1Q9ULE6 856 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 LOC102724159A0A0B4J2E5 919 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 TRIM66O15016 1216 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 SRGAP3O43295 1099 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 ZNF445P59923 1031 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 PWP2Q15269 919 aaKnown RBP9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 SULT6B1Q6IMI4 303 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 PIK3C2AO00443 1686 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 AMPHP49418 695 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 GNAI1P63096 354 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 GIMAP7Q8NHV1 300 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 CARD6Q9BX69 1037 aa9.14□□□□□ -0.95
ATP2C1-208ENST00000504948 CCDC85AQ96PX6 553 aaPredicted RBP9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 CICQ96RK0 1608 aaPredicted RBP9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 SLU7O95391 586 aaKnown RBP9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 ENOX2Q16206 610 aaKnown RBP9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 CT47A1Q5JQC4 288 aaPredicted RBP9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 TTC22Q5TAA0 569 aa9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 SNX21Q969T3 373 aa9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 LZTFL1Q9NQ48 299 aa9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 PARP4Q9UKK3 1724 aaKnown RBP9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 HGSO14964 777 aaPredicted RBP9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 LONRF3Q496Y0 759 aa9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 CHST3Q7LGC8 479 aa9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 WDR63Q8IWG1 891 aa9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 CEP57L1Q8IYX8 460 aa9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 GPATCH3Q96I76 525 aa9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 BOLA2Q9H3K6 86 aa9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 SYT1P21579 422 aa9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 UBE2HP62256 183 aa9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 ZNF397Q8NF99 534 aaPredicted RBP9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 CCDC12Q8WUD4 166 aaPredicted RBP9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 FAM212AQ96EL1 285 aa9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 SLC52A1Q9NWF4 448 aa9.13□□□□□ -0.95
ATP2C1-208ENST00000504948 FAM208AQ9UK61 1670 aaKnown RBP9.12□□□□□ -0.95
ATP2C1-208ENST00000504948 CEBPAP49715 358 aaPredicted RBP9.12□□□□□ -0.95
ATP2C1-208ENST00000504948 CCDC8Q9H0W5 538 aaPredicted RBP9.12□□□□□ -0.95
ATP2C1-208ENST00000504948 BRWD3Q6RI45 1802 aa9.12□□□□□ -0.95
ATP2C1-208ENST00000504948 ADGRL3Q9HAR2 1447 aa9.12□□□□□ -0.95
ATP2C1-208ENST00000504948 JAKMIP3Q5VZ66 844 aa9.12□□□□□ -0.95
ATP2C1-208ENST00000504948 TTC19Q6DKK2 380 aaPredicted RBP9.12□□□□□ -0.95
ATP2C1-208ENST00000504948 FAM200AQ8TCP9 573 aa9.12□□□□□ -0.95
ATP2C1-208ENST00000504948 USP26Q9BXU7 913 aa9.12□□□□□ -0.95
ATP2C1-208ENST00000504948 ZSCAN22P10073 491 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms