RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 THSD7AQ9UPZ6 1657 aa7.79□□□□□ -1.16
COPB2-204ENST00000504295 SPATA31A6Q5VVP1 1343 aa7.79□□□□□ -1.16
COPB2-204ENST00000504295 COL1A1P02452 1464 aaPredicted RBP7.79□□□□□ -1.16
COPB2-204ENST00000504295 LARGE1O95461 756 aa7.79□□□□□ -1.16
COPB2-204ENST00000504295 MBD3O95983 291 aa7.79□□□□□ -1.16
COPB2-204ENST00000504295 RRS1Q15050 365 aaKnown RBP7.79□□□□□ -1.16
COPB2-204ENST00000504295 RASEFQ8IZ41 740 aa7.79□□□□□ -1.16
COPB2-204ENST00000504295 NGDNQ8NEJ9 315 aaKnown RBP7.79□□□□□ -1.16
COPB2-204ENST00000504295 KIAA1524Q8TCG1 905 aa7.79□□□□□ -1.16
COPB2-204ENST00000504295 MAP4K1Q92918 833 aa7.79□□□□□ -1.16
COPB2-204ENST00000504295 MYH14Q7Z406 1995 aaKnown RBP7.79□□□□□ -1.16
COPB2-204ENST00000504295 ABCC12Q96J65 1359 aa7.79□□□□□ -1.16
COPB2-204ENST00000504295 KCNJ6P48051 423 aa7.79□□□□□ -1.16
COPB2-204ENST00000504295 HAP1P54257 671 aaPredicted RBP7.79□□□□□ -1.16
COPB2-204ENST00000504295 RBM6P78332 1123 aaKnown RBP7.79□□□□□ -1.16
COPB2-204ENST00000504295 SMAP1Q8IYB5 467 aaPredicted RBP7.79□□□□□ -1.16
COPB2-204ENST00000504295 MX1P20591 662 aa7.78□□□□□ -1.16
COPB2-204ENST00000504295 VPS53Q5VIR6 699 aa7.78□□□□□ -1.16
COPB2-204ENST00000504295 SOS2Q07890 1332 aaPredicted RBP7.78□□□□□ -1.16
COPB2-204ENST00000504295 FOXO3O43524 673 aa7.78□□□□□ -1.16
COPB2-204ENST00000504295 GADD45BO75293 160 aaPredicted RBP7.78□□□□□ -1.16
COPB2-204ENST00000504295 FLIIQ13045 1269 aa7.78□□□□□ -1.16
COPB2-204ENST00000504295 COG3Q96JB2 828 aa7.78□□□□□ -1.16
COPB2-204ENST00000504295 HSD3B7Q9H2F3 369 aa7.78□□□□□ -1.16
COPB2-204ENST00000504295 SH3TC1Q8TE82 1336 aa7.78□□□□□ -1.16
COPB2-204ENST00000504295 TOB2Q14106 344 aaPredicted RBP7.78□□□□□ -1.16
COPB2-204ENST00000504295 DCTN1Q14203 1278 aa7.78□□□□□ -1.16
COPB2-204ENST00000504295 NYAP1Q6ZVC0 841 aa7.78□□□□□ -1.16
COPB2-204ENST00000504295 KRT28Q7Z3Y7 464 aa7.78□□□□□ -1.16
COPB2-204ENST00000504295 FAM184AQ8NB25 1140 aa7.78□□□□□ -1.16
COPB2-204ENST00000504295 HMOX1P09601 288 aa7.77□□□□□ -1.17
COPB2-204ENST00000504295 ORAI2Q96SN7 254 aa7.77□□□□□ -1.17
COPB2-204ENST00000504295 REC8O95072 547 aa7.77□□□□□ -1.17
COPB2-204ENST00000504295 PDIA4P13667 645 aaKnown RBP7.77□□□□□ -1.17
COPB2-204ENST00000504295 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.77□□□□□ -1.17
COPB2-204ENST00000504295 ENGASEQ8NFI3 743 aa7.77□□□□□ -1.17
COPB2-204ENST00000504295 TDRD7Q8NHU6 1098 aaKnown RBP7.77□□□□□ -1.17
COPB2-204ENST00000504295 CHAMP1Q96JM3 812 aa7.77□□□□□ -1.17
COPB2-204ENST00000504295 SMARCA5O60264 1052 aaPredicted RBP7.76□□□□□ -1.17
COPB2-204ENST00000504295 TNNT2P45379 298 aaPredicted RBP7.76□□□□□ -1.17
COPB2-204ENST00000504295 CCDC93Q567U6 631 aa7.76□□□□□ -1.17
COPB2-204ENST00000504295 MCM10Q7L590 875 aa7.76□□□□□ -1.17
COPB2-204ENST00000504295 IP6K1Q92551 441 aa7.76□□□□□ -1.17
COPB2-204ENST00000504295 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.76□□□□□ -1.17
COPB2-204ENST00000504295 IQCB1Q15051 598 aa7.76□□□□□ -1.17
COPB2-204ENST00000504295 PRIMPOLQ96LW4 560 aa7.76□□□□□ -1.17
COPB2-204ENST00000504295 TNS3Q68CZ2 1445 aa7.76□□□□□ -1.17
COPB2-204ENST00000504295 GNAI2P04899 355 aa7.75□□□□□ -1.17
COPB2-204ENST00000504295 SASS6Q6UVJ0 657 aa7.75□□□□□ -1.17
COPB2-204ENST00000504295 BPIFA3Q9BQP9 254 aa7.75□□□□□ -1.17
COPB2-204ENST00000504295 RBM27Q9P2N5 1060 aaKnown RBP7.75□□□□□ -1.17
COPB2-204ENST00000504295 NUTM2FA1L443 756 aa7.75□□□□□ -1.17
COPB2-204ENST00000504295 SULT6B1Q6IMI4 303 aa7.75□□□□□ -1.17
COPB2-204ENST00000504295 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.75□□□□□ -1.17
COPB2-204ENST00000504295 SASH1O94885 1247 aa7.75□□□□□ -1.17
COPB2-204ENST00000504295 COL5A2P05997 1499 aaPredicted RBP7.75□□□□□ -1.17
COPB2-204ENST00000504295 ZSCAN22P10073 491 aaPredicted RBP7.75□□□□□ -1.17
COPB2-204ENST00000504295 DMTNQ08495 405 aa7.75□□□□□ -1.17
COPB2-204ENST00000504295 SNW1Q13573 536 aaKnown RBP7.75□□□□□ -1.17
COPB2-204ENST00000504295 NEUROD2Q15784 382 aa7.75□□□□□ -1.17
COPB2-204ENST00000504295 MAP7D2Q96T17 732 aa7.75□□□□□ -1.17
COPB2-204ENST00000504295 LRRCC1Q9C099 1032 aa7.75□□□□□ -1.17
COPB2-204ENST00000504295 MYH4Q9Y623 1939 aa7.75□□□□□ -1.17
COPB2-204ENST00000504295 ALDH1L1O75891 902 aa7.74□□□□□ -1.17
COPB2-204ENST00000504295 F13A1P00488 732 aa7.74□□□□□ -1.17
COPB2-204ENST00000504295 RESTQ13127 1097 aa7.74□□□□□ -1.17
COPB2-204ENST00000504295 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.74□□□□□ -1.17
COPB2-204ENST00000504295 ELOA2Q8IYF1 753 aaPredicted RBP7.74□□□□□ -1.17
COPB2-204ENST00000504295 MRVI1Q9Y6F6 885 aa7.74□□□□□ -1.17
COPB2-204ENST00000504295 SPATA31A3Q5VYP0 1347 aa7.74□□□□□ -1.17
COPB2-204ENST00000504295 FANCGO15287 622 aa7.74□□□□□ -1.17
COPB2-204ENST00000504295 USP48Q86UV5 1035 aa7.74□□□□□ -1.17
COPB2-204ENST00000504295 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.74□□□□□ -1.17
COPB2-204ENST00000504295 TMX1Q9H3N1 280 aa7.74□□□□□ -1.17
COPB2-204ENST00000504295 ZMYM6O95789 1325 aa7.74□□□□□ -1.17
COPB2-204ENST00000504295 U2SURPO15042 1029 aaKnown RBP7.74□□□□□ -1.17
COPB2-204ENST00000504295 UBE2HP62256 183 aa7.74□□□□□ -1.17
COPB2-204ENST00000504295 MEX3CQ5U5Q3 659 aaKnown RBP7.74□□□□□ -1.17
COPB2-204ENST00000504295 KIAA1211Q6ZU35 1233 aa7.74□□□□□ -1.17
COPB2-204ENST00000504295 WDR19Q8NEZ3 1342 aa7.73□□□□□ -1.17
COPB2-204ENST00000504295 GNAI3P08754 354 aa7.73□□□□□ -1.17
COPB2-204ENST00000504295 FECHP22830 423 aa7.73□□□□□ -1.17
COPB2-204ENST00000504295 EXOSC10Q01780 885 aaKnown RBP7.73□□□□□ -1.17
COPB2-204ENST00000504295 C10orf71Q711Q0 1435 aa7.73□□□□□ -1.17
COPB2-204ENST00000504295 TAF1P21675 1872 aa7.73□□□□□ -1.17
COPB2-204ENST00000504295 GNAT3A8MTJ3 354 aa7.73□□□□□ -1.17
COPB2-204ENST00000504295 KDM4AO75164 1064 aa7.73□□□□□ -1.17
COPB2-204ENST00000504295 CCDC183Q5T5S1 534 aa7.73□□□□□ -1.17
COPB2-204ENST00000504295 CCDC39Q9UFE4 941 aa7.73□□□□□ -1.17
COPB2-204ENST00000504295 MYH8P13535 1937 aa7.73□□□□□ -1.17
COPB2-204ENST00000504295 CTDNEP1O95476 244 aa7.73□□□□□ -1.17
COPB2-204ENST00000504295 AK2P54819 239 aa7.73□□□□□ -1.17
COPB2-204ENST00000504295 SLFNL1Q499Z3 407 aa7.73□□□□□ -1.17
COPB2-204ENST00000504295 ARHGEF25Q86VW2 580 aa7.73□□□□□ -1.17
COPB2-204ENST00000504295 IGKV5-2P06315 115 aa7.72□□□□□ -1.17
COPB2-204ENST00000504295 SYT1P21579 422 aa7.72□□□□□ -1.17
COPB2-204ENST00000504295 PTH1RQ03431 593 aa7.72□□□□□ -1.17
COPB2-204ENST00000504295 ADCK5Q3MIX3 580 aa7.72□□□□□ -1.17
COPB2-204ENST00000504295 NBPF11Q86T75 865 aa7.72□□□□□ -1.17
COPB2-204ENST00000504295 RHPN1Q8TCX5 695 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms