RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 SNRPA1P09661 255 aaKnown RBP14.81□□□□□ -0.04
UBE2D3-211ENST00000502404 SOGA3Q5TF21 947 aa14.81□□□□□ -0.04
UBE2D3-211ENST00000502404 CLEC4GQ6UXB4 293 aa14.81□□□□□ -0.04
UBE2D3-211ENST00000502404 DZIP3Q86Y13 1208 aaKnown RBP14.81□□□□□ -0.04
UBE2D3-211ENST00000502404 CNBD1Q8NA66 436 aa14.81□□□□□ -0.04
UBE2D3-211ENST00000502404 CNKSR1Q969H4 720 aa14.81□□□□□ -0.04
UBE2D3-211ENST00000502404 COLQQ9Y215 455 aaPredicted RBP14.81□□□□□ -0.04
UBE2D3-211ENST00000502404 POTEFA5A3E0 1075 aa14.8□□□□□ -0.04
UBE2D3-211ENST00000502404 PRR5LQ6MZQ0 368 aa14.8□□□□□ -0.04
UBE2D3-211ENST00000502404 UBR2Q8IWV8 1755 aa14.8□□□□□ -0.04
UBE2D3-211ENST00000502404 VIRMAQ69YN4 1812 aaKnown RBP14.8□□□□□ -0.04
UBE2D3-211ENST00000502404 CAMTA2O94983 1202 aa14.79□□□□□ -0.04
UBE2D3-211ENST00000502404 AFDNP55196 1824 aaKnown RBP14.79□□□□□ -0.04
UBE2D3-211ENST00000502404 STYK1Q6J9G0 422 aa14.79□□□□□ -0.04
UBE2D3-211ENST00000502404 NRXN2Q9P2S2 1712 aa14.79□□□□□ -0.04
UBE2D3-211ENST00000502404 C21orf2O43822 256 aa14.78□□□□□ -0.04
UBE2D3-211ENST00000502404 SEC24BO95487 1268 aa14.78□□□□□ -0.04
UBE2D3-211ENST00000502404 PPP2R1AP30153 589 aa14.78□□□□□ -0.04
UBE2D3-211ENST00000502404 KLRG1Q96E93 195 aa14.78□□□□□ -0.04
UBE2D3-211ENST00000502404 USP16Q9Y5T5 823 aa14.78□□□□□ -0.04
UBE2D3-211ENST00000502404 NFKBIEO00221 500 aa14.77□□□□□ -0.05
UBE2D3-211ENST00000502404 KCNQ3O43525 872 aa14.77□□□□□ -0.05
UBE2D3-211ENST00000502404 TAF7Q15545 349 aaPredicted RBP14.77□□□□□ -0.05
UBE2D3-211ENST00000502404 ERFEQ4G0M1 354 aa14.77□□□□□ -0.05
UBE2D3-211ENST00000502404 NBPF5PQ86XG9 351 aaPredicted RBP14.77□□□□□ -0.05
UBE2D3-211ENST00000502404 MASTLQ96GX5 879 aa14.77□□□□□ -0.05
UBE2D3-211ENST00000502404 SBF1O95248 1867 aa14.77□□□□□ -0.05
UBE2D3-211ENST00000502404 LTBP3Q9NS15 1303 aa14.76□□□□□ -0.05
UBE2D3-211ENST00000502404 TPTE2Q6XPS3 522 aa14.76□□□□□ -0.05
UBE2D3-211ENST00000502404 MCM10Q7L590 875 aa14.76□□□□□ -0.05
UBE2D3-211ENST00000502404 PNISRQ8TF01 805 aaKnown RBP14.76□□□□□ -0.05
UBE2D3-211ENST00000502404 TAOK3Q9H2K8 898 aa14.76□□□□□ -0.05
UBE2D3-211ENST00000502404 PNNQ9H307 717 aaKnown RBP14.76□□□□□ -0.05
UBE2D3-211ENST00000502404 TNRC6CQ9HCJ0 1690 aaKnown RBP14.75□□□□□ -0.05
UBE2D3-211ENST00000502404 SRGNP10124 158 aa14.75□□□□□ -0.05
UBE2D3-211ENST00000502404 CCDC24Q8N4L8 307 aa14.75□□□□□ -0.05
UBE2D3-211ENST00000502404 NPR1P16066 1061 aa14.74□□□□□ -0.05
UBE2D3-211ENST00000502404 GTF2E1P29083 439 aaPredicted RBP14.74□□□□□ -0.05
UBE2D3-211ENST00000502404 PRPF40BQ6NWY9 871 aaKnown RBP14.74□□□□□ -0.05
UBE2D3-211ENST00000502404 JMYQ8N9B5 988 aa14.74□□□□□ -0.05
UBE2D3-211ENST00000502404 TMEM121BQ9BXQ6 578 aaPredicted RBP14.74□□□□□ -0.05
UBE2D3-211ENST00000502404 DLEC1Q9Y238 1755 aa14.73□□□□□ -0.05
UBE2D3-211ENST00000502404 PRELPP51888 382 aa14.73□□□□□ -0.05
UBE2D3-211ENST00000502404 MICALL2Q8IY33 904 aa14.73□□□□□ -0.05
UBE2D3-211ENST00000502404 NIP7Q9Y221 180 aaKnown RBP eCLIP14.73□□□□□ -0.05
UBE2D3-211ENST00000502404 SIPA1L3O60292 1781 aaPredicted RBP14.73□□□□□ -0.05
UBE2D3-211ENST00000502404 DCTN1Q14203 1278 aa14.72□□□□□ -0.05
UBE2D3-211ENST00000502404 CCDC93Q567U6 631 aa14.72□□□□□ -0.05
UBE2D3-211ENST00000502404 SCN7AQ01118 1682 aa14.71□□□□□ -0.05
UBE2D3-211ENST00000502404 IQCA1LA6NCM1 817 aa14.71□□□□□ -0.05
UBE2D3-211ENST00000502404 ALDH1B1P30837 517 aa14.71□□□□□ -0.05
UBE2D3-211ENST00000502404 PIP4K2AP48426 406 aaPredicted RBP14.71□□□□□ -0.05
UBE2D3-211ENST00000502404 HTRA3P83110 453 aa14.71□□□□□ -0.05
UBE2D3-211ENST00000502404 BOLA1Q9Y3E2 137 aa14.71□□□□□ -0.05
UBE2D3-211ENST00000502404 WDR90Q96KV7 1748 aa14.71□□□□□ -0.05
UBE2D3-211ENST00000502404 PRAMEF22A3QJZ6 481 aa14.7□□□□□ -0.06
UBE2D3-211ENST00000502404 RTKN2Q8IZC4 609 aa14.7□□□□□ -0.06
UBE2D3-211ENST00000502404 L3MBTL3Q96JM7 780 aaPredicted RBP14.7□□□□□ -0.06
UBE2D3-211ENST00000502404 NYXQ9GZU5 481 aa14.7□□□□□ -0.06
UBE2D3-211ENST00000502404 KLRG2A4D1S0 409 aaPredicted RBP14.69□□□□□ -0.06
UBE2D3-211ENST00000502404 NBPF26B4DH59 902 aa14.69□□□□□ -0.06
UBE2D3-211ENST00000502404 NBPF10Q6P3W6 841 aaKnown RBP14.69□□□□□ -0.06
UBE2D3-211ENST00000502404 NBPF15Q8N660 670 aa14.69□□□□□ -0.06
UBE2D3-211ENST00000502404 POTECB2RU33 542 aa14.68□□□□□ -0.06
UBE2D3-211ENST00000502404 ERVV-1B6SEH8 477 aa14.68□□□□□ -0.06
UBE2D3-211ENST00000502404 KIF6Q6ZMV9 814 aa14.68□□□□□ -0.06
UBE2D3-211ENST00000502404 C7orf43Q8WVR3 580 aa14.68□□□□□ -0.06
UBE2D3-211ENST00000502404 MAPK8IP3Q9UPT6 1336 aa14.67□□□□□ -0.06
UBE2D3-211ENST00000502404 ANKRD31Q8N7Z5 1873 aa14.67□□□□□ -0.06
UBE2D3-211ENST00000502404 FAM177BA6PVY3 158 aa14.67□□□□□ -0.06
UBE2D3-211ENST00000502404 DDNO94850 711 aaPredicted RBP14.67□□□□□ -0.06
UBE2D3-211ENST00000502404 FKBP4Q02790 459 aaKnown RBP eCLIP14.67□□□□□ -0.06
UBE2D3-211ENST00000502404 NFE2L2Q16236 605 aa14.67□□□□□ -0.06
UBE2D3-211ENST00000502404 MIS18AQ9NYP9 233 aa14.67□□□□□ -0.06
UBE2D3-211ENST00000502404 CCDC88AQ3V6T2 1871 aa14.66□□□□□ -0.06
UBE2D3-211ENST00000502404 GRIPAP1Q4V328 841 aa14.66□□□□□ -0.06
UBE2D3-211ENST00000502404 CC2D2BQ6DHV5 1058 aa14.66□□□□□ -0.06
UBE2D3-211ENST00000502404 NGEFQ8N5V2 710 aa14.66□□□□□ -0.06
UBE2D3-211ENST00000502404 RRP7AQ9Y3A4 280 aaKnown RBP14.66□□□□□ -0.06
UBE2D3-211ENST00000502404 FER1L6Q2WGJ9 1857 aa14.65□□□□□ -0.06
UBE2D3-211ENST00000502404 HLFQ16534 295 aa14.65□□□□□ -0.06
UBE2D3-211ENST00000502404 LDHDQ86WU2 507 aa14.65□□□□□ -0.06
UBE2D3-211ENST00000502404 CRISPLD2Q9H0B8 497 aa14.65□□□□□ -0.06
UBE2D3-211ENST00000502404 TIAM2Q8IVF5 1701 aa14.65□□□□□ -0.06
UBE2D3-211ENST00000502404 MAP3K15Q6ZN16 1313 aa14.65□□□□□ -0.06
UBE2D3-211ENST00000502404 SLX4Q8IY92 1834 aa14.64□□□□□ -0.07
UBE2D3-211ENST00000502404 G3V3G9 751 aa14.64□□□□□ -0.07
UBE2D3-211ENST00000502404 EIF4A1P60842 406 aaKnown RBP14.64□□□□□ -0.07
UBE2D3-211ENST00000502404 RPGRQ92834 1020 aaKnown RBP14.64□□□□□ -0.07
UBE2D3-211ENST00000502404 TMX4Q9H1E5 349 aaPredicted RBP14.64□□□□□ -0.07
UBE2D3-211ENST00000502404 BCORQ6W2J9 1755 aa14.64□□□□□ -0.07
UBE2D3-211ENST00000502404 ERBB4Q15303 1308 aa14.64□□□□□ -0.07
UBE2D3-211ENST00000502404 DICER1Q9UPY3 1922 aaKnown RBP14.63□□□□□ -0.07
UBE2D3-211ENST00000502404 JDP2Q8WYK2 163 aa14.63□□□□□ -0.07
UBE2D3-211ENST00000502404 PLEKHF1Q96S99 279 aa14.63□□□□□ -0.07
UBE2D3-211ENST00000502404 ZNF277Q9NRM2 450 aaPredicted RBP14.63□□□□□ -0.07
UBE2D3-211ENST00000502404 COL11A2P13942 1736 aaPredicted RBP14.63□□□□□ -0.07
UBE2D3-211ENST00000502404 MYL6BP14649 208 aa14.62□□□□□ -0.07
UBE2D3-211ENST00000502404 IARSP41252 1262 aaKnown RBP14.62□□□□□ -0.07
UBE2D3-211ENST00000502404 LMOD3Q0VAK6 560 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms