RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 USP16Q9Y5T5 823 aa17.66■□□□□ 0.42
NEAT1-201ENST00000499732 C16orf71Q8IYS4 520 aaPredicted RBP17.65■□□□□ 0.42
NEAT1-201ENST00000499732 LMBRD1Q9NUN5 540 aa17.65■□□□□ 0.42
NEAT1-201ENST00000499732 ASAP1Q9ULH1 1129 aa17.65■□□□□ 0.42
NEAT1-201ENST00000499732 MAP3K2Q9Y2U5 619 aa17.65■□□□□ 0.42
NEAT1-201ENST00000499732 LRRFIP2Q9Y608 721 aaKnown RBP17.65■□□□□ 0.42
NEAT1-201ENST00000499732 PTCD1O75127 700 aaKnown RBP17.65■□□□□ 0.42
NEAT1-201ENST00000499732 UBTFL1P0CB47 393 aaPredicted RBP17.65■□□□□ 0.42
NEAT1-201ENST00000499732 MCTP1Q6DN14 999 aa17.65■□□□□ 0.42
NEAT1-201ENST00000499732 LRP10Q7Z4F1 713 aa17.65■□□□□ 0.42
NEAT1-201ENST00000499732 ERC2O15083 957 aa17.64■□□□□ 0.41
NEAT1-201ENST00000499732 RRP9O43818 475 aaKnown RBP17.64■□□□□ 0.41
NEAT1-201ENST00000499732 HS1BP3Q53T59 392 aa17.64■□□□□ 0.41
NEAT1-201ENST00000499732 ZSCAN30Q86W11 494 aa17.64■□□□□ 0.41
NEAT1-201ENST00000499732 TEX13AQ9BXU3 409 aaPredicted RBP17.64■□□□□ 0.41
NEAT1-201ENST00000499732 TPM2P07951 284 aa17.63■□□□□ 0.41
NEAT1-201ENST00000499732 DDX58O95786 925 aaKnown RBP17.63■□□□□ 0.41
NEAT1-201ENST00000499732 ATP8B2P98198 1209 aa17.63■□□□□ 0.41
NEAT1-201ENST00000499732 OTUD7AQ8TE49 926 aaPredicted RBP17.63■□□□□ 0.41
NEAT1-201ENST00000499732 PNMA6EA0A0J9YXQ4 647 aa17.62■□□□□ 0.41
NEAT1-201ENST00000499732 ALDH1L1O75891 902 aa17.62■□□□□ 0.41
NEAT1-201ENST00000499732 NBPF7P0C2Y1 421 aaPredicted RBP17.62■□□□□ 0.41
NEAT1-201ENST00000499732 MYL6BP14649 208 aa17.62■□□□□ 0.41
NEAT1-201ENST00000499732 ZSCAN23Q3MJ62 389 aa17.62■□□□□ 0.41
NEAT1-201ENST00000499732 ARFGEF2Q9Y6D5 1785 aa17.62■□□□□ 0.41
NEAT1-201ENST00000499732 NHSQ6T4R5 1651 aa17.62■□□□□ 0.41
NEAT1-201ENST00000499732 RREB1Q92766 1687 aa17.61■□□□□ 0.41
NEAT1-201ENST00000499732 MCM2P49736 904 aa17.61■□□□□ 0.41
NEAT1-201ENST00000499732 AIMP1Q12904 312 aaKnown RBP17.61■□□□□ 0.41
NEAT1-201ENST00000499732 XAGE3Q8WTP9 111 aa17.61■□□□□ 0.41
NEAT1-201ENST00000499732 SPON1Q9HCB6 807 aa17.61■□□□□ 0.41
NEAT1-201ENST00000499732 GLIPR1L2Q4G1C9 344 aa17.61■□□□□ 0.41
NEAT1-201ENST00000499732 CAVIN1Q6NZI2 390 aaKnown RBP17.6■□□□□ 0.41
NEAT1-201ENST00000499732 COPS6Q7L5N1 327 aa17.6■□□□□ 0.41
NEAT1-201ENST00000499732 KCNQ2O43526 872 aa17.59■□□□□ 0.41
NEAT1-201ENST00000499732 SMARCA5O60264 1052 aaPredicted RBP17.59■□□□□ 0.41
NEAT1-201ENST00000499732 PIP4K2AP48426 406 aaPredicted RBP17.59■□□□□ 0.41
NEAT1-201ENST00000499732 CWF19L2Q2TBE0 894 aaKnown RBP17.59■□□□□ 0.41
NEAT1-201ENST00000499732 LINS1Q8NG48 757 aa17.59■□□□□ 0.41
NEAT1-201ENST00000499732 SMARCC1Q92922 1105 aaPredicted RBP17.59■□□□□ 0.41
NEAT1-201ENST00000499732 PPP1R1BQ9UD71 204 aaPredicted RBP17.59■□□□□ 0.41
NEAT1-201ENST00000499732 MSNP26038 577 aaKnown RBP17.58■□□□□ 0.41
NEAT1-201ENST00000499732 SSH3Q8TE77 659 aa17.58■□□□□ 0.41
NEAT1-201ENST00000499732 AFDNP55196 1824 aaKnown RBP17.58■□□□□ 0.4
NEAT1-201ENST00000499732 STARD3NLO95772 234 aa17.58■□□□□ 0.4
NEAT1-201ENST00000499732 PDE1AP54750 535 aa17.58■□□□□ 0.4
NEAT1-201ENST00000499732 PKP1Q13835 747 aa17.58■□□□□ 0.4
NEAT1-201ENST00000499732 HSP90AA2PQ14568 343 aaPredicted RBP17.58■□□□□ 0.4
NEAT1-201ENST00000499732 NUP188Q5SRE5 1749 aa17.58■□□□□ 0.4
NEAT1-201ENST00000499732 RIC3Q7Z5B4 369 aa17.58■□□□□ 0.4
NEAT1-201ENST00000499732 PDLIM2Q96JY6 352 aa17.58■□□□□ 0.4
NEAT1-201ENST00000499732 NBPF26B4DH59 902 aa17.57■□□□□ 0.4
NEAT1-201ENST00000499732 APBB1O00213 710 aa17.57■□□□□ 0.4
NEAT1-201ENST00000499732 POLA2Q14181 598 aa17.57■□□□□ 0.4
NEAT1-201ENST00000499732 NBPF10Q6P3W6 841 aaKnown RBP17.57■□□□□ 0.4
NEAT1-201ENST00000499732 ZGPATQ8N5A5 531 aaKnown RBP17.57■□□□□ 0.4
NEAT1-201ENST00000499732 NBPF15Q8N660 670 aa17.57■□□□□ 0.4
NEAT1-201ENST00000499732 EXOC6BQ9Y2D4 811 aa17.57■□□□□ 0.4
NEAT1-201ENST00000499732 SALL3Q9BXA9 1300 aa17.57■□□□□ 0.4
NEAT1-201ENST00000499732 SBF2Q86WG5 1849 aa17.57■□□□□ 0.4
NEAT1-201ENST00000499732 RGPD3A6NKT7 1758 aaPredicted RBP17.56■□□□□ 0.4
NEAT1-201ENST00000499732 RGPD4Q7Z3J3 1758 aa17.56■□□□□ 0.4
NEAT1-201ENST00000499732 IGKV5-2P06315 115 aa17.56■□□□□ 0.4
NEAT1-201ENST00000499732 TERF1P54274 439 aa17.56■□□□□ 0.4
NEAT1-201ENST00000499732 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.56■□□□□ 0.4
NEAT1-201ENST00000499732 PPP1R42Q7Z4L9 355 aa17.56■□□□□ 0.4
NEAT1-201ENST00000499732 DNAJC10Q8IXB1 793 aa17.56■□□□□ 0.4
NEAT1-201ENST00000499732 ZDHHC9Q9Y397 364 aa17.56■□□□□ 0.4
NEAT1-201ENST00000499732 TJP1Q07157 1748 aa17.56■□□□□ 0.4
NEAT1-201ENST00000499732 BTAF1O14981 1849 aa17.56■□□□□ 0.4
NEAT1-201ENST00000499732 UTYO14607 1347 aa17.56■□□□□ 0.4
NEAT1-201ENST00000499732 DCAF8L1A6NGE4 600 aa17.56■□□□□ 0.4
NEAT1-201ENST00000499732 MBD3O95983 291 aa17.56■□□□□ 0.4
NEAT1-201ENST00000499732 NCLP19338 710 aaKnown RBP17.56■□□□□ 0.4
NEAT1-201ENST00000499732 MCCP23508 829 aa17.56■□□□□ 0.4
NEAT1-201ENST00000499732 ANAPC15P60006 121 aa17.56■□□□□ 0.4
NEAT1-201ENST00000499732 ANKRD13DQ6ZTN6 518 aa17.56■□□□□ 0.4
NEAT1-201ENST00000499732 SLC4A9Q96Q91 983 aa17.56■□□□□ 0.4
NEAT1-201ENST00000499732 METTL22Q9BUU2 404 aaPredicted RBP17.56■□□□□ 0.4
NEAT1-201ENST00000499732 STK32BQ9NY57 414 aa17.56■□□□□ 0.4
NEAT1-201ENST00000499732 C9orf78Q9NZ63 289 aaPredicted RBP17.56■□□□□ 0.4
NEAT1-201ENST00000499732 PALLDQ8WX93 1383 aa17.56■□□□□ 0.4
NEAT1-201ENST00000499732 OFD1O75665 1012 aa17.55■□□□□ 0.4
NEAT1-201ENST00000499732 A1BGP04217 495 aa17.55■□□□□ 0.4
NEAT1-201ENST00000499732 TXNRD1Q16881 649 aa17.55■□□□□ 0.4
NEAT1-201ENST00000499732 GPT2Q8TD30 523 aa17.55■□□□□ 0.4
NEAT1-201ENST00000499732 IL17RAQ96F46 866 aa17.55■□□□□ 0.4
NEAT1-201ENST00000499732 NEURL1BA8MQ27 555 aa17.54■□□□□ 0.4
NEAT1-201ENST00000499732 GRM8O00222 908 aa17.54■□□□□ 0.4
NEAT1-201ENST00000499732 PRPF40AO75400 957 aaKnown RBP17.54■□□□□ 0.4
NEAT1-201ENST00000499732 MTX1Q13505 466 aa17.54■□□□□ 0.4
NEAT1-201ENST00000499732 LRSAM1Q6UWE0 723 aa17.54■□□□□ 0.4
NEAT1-201ENST00000499732 CICQ96RK0 1608 aaPredicted RBP17.54■□□□□ 0.4
NEAT1-201ENST00000499732 EPB41L2O43491 1005 aaKnown RBP17.54■□□□□ 0.4
NEAT1-201ENST00000499732 NEXNQ0ZGT2 675 aa17.54■□□□□ 0.4
NEAT1-201ENST00000499732 CUL4AQ13619 759 aa17.54■□□□□ 0.4
NEAT1-201ENST00000499732 PTF1AQ7RTS3 328 aa17.54■□□□□ 0.4
NEAT1-201ENST00000499732 INTS4Q96HW7 963 aaKnown RBP17.54■□□□□ 0.4
NEAT1-201ENST00000499732 MYD88Q99836 296 aa17.54■□□□□ 0.4
NEAT1-201ENST00000499732 RBSNQ9H1K0 784 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms