RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 DNAAF4Q8WXU2 420 aa19.84■□□□□ 0.77
CPNE1-228ENST00000498814 BCL2L13Q9BXK5 485 aa19.84■□□□□ 0.77
CPNE1-228ENST00000498814 PDZRN3Q9UPQ7 1066 aa19.84■□□□□ 0.77
CPNE1-228ENST00000498814 PTPRCP08575 1304 aa19.83■□□□□ 0.77
CPNE1-228ENST00000498814 NUTM1Q86Y26 1132 aa19.83■□□□□ 0.77
CPNE1-228ENST00000498814 CCDC191Q8NCU4 936 aa19.83■□□□□ 0.77
CPNE1-228ENST00000498814 RIC1Q4ADV7 1423 aa19.83■□□□□ 0.76
CPNE1-228ENST00000498814 A0A0G2JLW4 131 aa19.82■□□□□ 0.76
CPNE1-228ENST00000498814 IGKV5-2P06315 115 aa19.82■□□□□ 0.76
CPNE1-228ENST00000498814 DPEP1P16444 411 aa19.82■□□□□ 0.76
CPNE1-228ENST00000498814 ERFEQ4G0M1 354 aa19.82■□□□□ 0.76
CPNE1-228ENST00000498814 TRMT112Q9UI30 125 aaKnown RBP19.82■□□□□ 0.76
CPNE1-228ENST00000498814 COL11A2P13942 1736 aaPredicted RBP19.82■□□□□ 0.76
CPNE1-228ENST00000498814 KLRG2A4D1S0 409 aaPredicted RBP19.81■□□□□ 0.76
CPNE1-228ENST00000498814 KCNA3P22001 575 aa19.81■□□□□ 0.76
CPNE1-228ENST00000498814 SLC10A5Q5PT55 438 aa19.81■□□□□ 0.76
CPNE1-228ENST00000498814 ABCC12Q96J65 1359 aa19.81■□□□□ 0.76
CPNE1-228ENST00000498814 SH3TC1Q8TE82 1336 aa19.8■□□□□ 0.76
CPNE1-228ENST00000498814 F6X3S4 739 aa19.8■□□□□ 0.76
CPNE1-228ENST00000498814 H0YIN7 160 aa19.8■□□□□ 0.76
CPNE1-228ENST00000498814 CHRNA5P30532 468 aa19.8■□□□□ 0.76
CPNE1-228ENST00000498814 C2CD5Q86YS7 1000 aa19.8■□□□□ 0.76
CPNE1-228ENST00000498814 LINS1Q8NG48 757 aa19.8■□□□□ 0.76
CPNE1-228ENST00000498814 YTHDC1Q96MU7 727 aaKnown RBP19.8■□□□□ 0.76
CPNE1-228ENST00000498814 CWC25Q9NXE8 425 aaPredicted RBP19.8■□□□□ 0.76
CPNE1-228ENST00000498814 TNRC6CQ9HCJ0 1690 aaKnown RBP19.8■□□□□ 0.76
CPNE1-228ENST00000498814 NEURL1BA8MQ27 555 aa19.79■□□□□ 0.76
CPNE1-228ENST00000498814 DDX60Q8IY21 1712 aaKnown RBP19.79■□□□□ 0.76
CPNE1-228ENST00000498814 LAMB2P55268 1798 aa19.78■□□□□ 0.76
CPNE1-228ENST00000498814 CWF19L2Q2TBE0 894 aaKnown RBP19.78■□□□□ 0.76
CPNE1-228ENST00000498814 BEND3Q5T5X7 828 aa19.78■□□□□ 0.76
CPNE1-228ENST00000498814 ZBTB38Q8NAP3 1195 aaPredicted RBP19.78■□□□□ 0.76
CPNE1-228ENST00000498814 PIM2Q9P1W9 311 aa19.78■□□□□ 0.76
CPNE1-228ENST00000498814 KIF16BQ96L93 1317 aa19.77■□□□□ 0.76
CPNE1-228ENST00000498814 ARFGEF1Q9Y6D6 1849 aa19.77■□□□□ 0.76
CPNE1-228ENST00000498814 PCCAP05165 728 aaPredicted RBP19.77■□□□□ 0.76
CPNE1-228ENST00000498814 SRGNP10124 158 aa19.77■□□□□ 0.76
CPNE1-228ENST00000498814 SYNE4Q8N205 404 aa19.77■□□□□ 0.76
CPNE1-228ENST00000498814 FAM89AQ96GI7 184 aa19.77■□□□□ 0.76
CPNE1-228ENST00000498814 NOB1Q9ULX3 412 aaKnown RBP19.77■□□□□ 0.76
CPNE1-228ENST00000498814 BCAR3O75815 825 aa19.76■□□□□ 0.75
CPNE1-228ENST00000498814 CRY2Q49AN0 593 aa19.76■□□□□ 0.75
CPNE1-228ENST00000498814 ARHGAP45Q92619 1136 aa19.76■□□□□ 0.75
CPNE1-228ENST00000498814 DCAF8L1A6NGE4 600 aa19.75■□□□□ 0.75
CPNE1-228ENST00000498814 GCKRQ14397 625 aa19.75■□□□□ 0.75
CPNE1-228ENST00000498814 STYK1Q6J9G0 422 aa19.75■□□□□ 0.75
CPNE1-228ENST00000498814 SLC4A10Q6U841 1118 aa19.75■□□□□ 0.75
CPNE1-228ENST00000498814 MASTLQ96GX5 879 aa19.75■□□□□ 0.75
CPNE1-228ENST00000498814 NLRP3Q96P20 1036 aa19.75■□□□□ 0.75
CPNE1-228ENST00000498814 CACNA1SQ13698 1873 aa19.75■□□□□ 0.75
CPNE1-228ENST00000498814 IRS4O14654 1257 aaPredicted RBP19.74■□□□□ 0.75
CPNE1-228ENST00000498814 ALDH1L1O75891 902 aa19.74■□□□□ 0.75
CPNE1-228ENST00000498814 HCLS1P14317 486 aaPredicted RBP19.74■□□□□ 0.75
CPNE1-228ENST00000498814 HSP90B1P14625 803 aaKnown RBP19.74■□□□□ 0.75
CPNE1-228ENST00000498814 NPR1P16066 1061 aa19.74■□□□□ 0.75
CPNE1-228ENST00000498814 GPR162Q16538 588 aa19.74■□□□□ 0.75
CPNE1-228ENST00000498814 DALRD3Q5D0E6 543 aaKnown RBP19.74■□□□□ 0.75
CPNE1-228ENST00000498814 API5Q9BZZ5 524 aaKnown RBP19.74■□□□□ 0.75
CPNE1-228ENST00000498814 SRCIN1Q9C0H9 1055 aa19.74■□□□□ 0.75
CPNE1-228ENST00000498814 CDHR2Q9BYE9 1310 aa19.74■□□□□ 0.75
CPNE1-228ENST00000498814 GOLGB1Q14789 3259 aaKnown RBP19.73■□□□□ 0.75
CPNE1-228ENST00000498814 MYH3P11055 1940 aa19.73■□□□□ 0.75
CPNE1-228ENST00000498814 H7C1W4 665 aa19.73■□□□□ 0.75
CPNE1-228ENST00000498814 IPO8O15397 1037 aaKnown RBP19.73■□□□□ 0.75
CPNE1-228ENST00000498814 YBX3P16989 372 aaKnown RBP eCLIP19.73■□□□□ 0.75
CPNE1-228ENST00000498814 RTL5Q5HYW3 569 aaPredicted RBP19.73■□□□□ 0.75
CPNE1-228ENST00000498814 C3orf67Q6ZVT6 689 aa19.73■□□□□ 0.75
CPNE1-228ENST00000498814 PELP1Q8IZL8 1130 aaKnown RBP19.73■□□□□ 0.75
CPNE1-228ENST00000498814 TTLL6Q8N841 843 aa19.73■□□□□ 0.75
CPNE1-228ENST00000498814 ZNF622Q969S3 477 aaKnown RBP eCLIP19.73■□□□□ 0.75
CPNE1-228ENST00000498814 HOXA10P31260 410 aaPredicted RBP19.72■□□□□ 0.75
CPNE1-228ENST00000498814 CNKSR1Q969H4 720 aa19.72■□□□□ 0.75
CPNE1-228ENST00000498814 WWC3Q9ULE0 1092 aa19.72■□□□□ 0.75
CPNE1-228ENST00000498814 BCS1LQ9Y276 419 aa19.72■□□□□ 0.75
CPNE1-228ENST00000498814 SLX4Q8IY92 1834 aa19.72■□□□□ 0.75
CPNE1-228ENST00000498814 JARID2Q92833 1246 aaPredicted RBP19.71■□□□□ 0.75
CPNE1-228ENST00000498814 GRIN3BO60391 1043 aa19.7■□□□□ 0.74
CPNE1-228ENST00000498814 ALDH1B1P30837 517 aa19.7■□□□□ 0.74
CPNE1-228ENST00000498814 SF3B3Q15393 1217 aaKnown RBP19.7■□□□□ 0.74
CPNE1-228ENST00000498814 UBE3BQ7Z3V4 1068 aa19.7■□□□□ 0.74
CPNE1-228ENST00000498814 RPGRQ92834 1020 aaKnown RBP19.7■□□□□ 0.74
CPNE1-228ENST00000498814 FRAT1Q92837 279 aaPredicted RBP19.7■□□□□ 0.74
CPNE1-228ENST00000498814 GRM8O00222 908 aa19.69■□□□□ 0.74
CPNE1-228ENST00000498814 PDE8AO60658 829 aa19.69■□□□□ 0.74
CPNE1-228ENST00000498814 CASP7P55210 303 aa19.69■□□□□ 0.74
CPNE1-228ENST00000498814 ATF7IPQ6VMQ6 1270 aa19.69■□□□□ 0.74
CPNE1-228ENST00000498814 RBM17Q96I25 401 aaKnown RBP19.69■□□□□ 0.74
CPNE1-228ENST00000498814 CRAMP1Q96RY5 1269 aa19.69■□□□□ 0.74
CPNE1-228ENST00000498814 RCAN3Q9UKA8 241 aa19.69■□□□□ 0.74
CPNE1-228ENST00000498814 TRIM27P14373 513 aa19.68■□□□□ 0.74
CPNE1-228ENST00000498814 CCT4P50991 539 aaKnown RBP19.68■□□□□ 0.74
CPNE1-228ENST00000498814 ZKSCAN2Q63HK3 967 aa19.68■□□□□ 0.74
CPNE1-228ENST00000498814 C9orf78Q9NZ63 289 aaPredicted RBP19.68■□□□□ 0.74
CPNE1-228ENST00000498814 TAF1P21675 1872 aa19.67■□□□□ 0.74
CPNE1-228ENST00000498814 PRPF40BQ6NWY9 871 aaKnown RBP19.67■□□□□ 0.74
CPNE1-228ENST00000498814 PLA2G12BQ9BX93 195 aa19.67■□□□□ 0.74
CPNE1-228ENST00000498814 UTYO14607 1347 aa19.67■□□□□ 0.74
CPNE1-228ENST00000498814 ABCC4O15439 1325 aa19.67■□□□□ 0.74
CPNE1-228ENST00000498814 CHD4Q14839 1912 aa19.65■□□□□ 0.74
CPNE1-228ENST00000498814 CTSWP56202 376 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms