RNA–Protein interactions for RNA: ENST00000498027.5

CAPN2-212, Transcript of calpain 2, humanhuman

TSL 2

Gene CAPN2, Length 1,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-212ENST00000498027 BICC1Q9H694 974 aaKnown RBP19.15■□□□□ 0.66
CAPN2-212ENST00000498027 PLSCR1O15162 318 aa19.14■□□□□ 0.65
CAPN2-212ENST00000498027 RAB11FIP3O75154 756 aa19.14■□□□□ 0.65
CAPN2-212ENST00000498027 PCCAP05165 728 aaPredicted RBP19.14■□□□□ 0.65
CAPN2-212ENST00000498027 RABL6Q3YEC7 729 aaPredicted RBP19.14■□□□□ 0.65
CAPN2-212ENST00000498027 NLRP10Q86W26 655 aa19.14■□□□□ 0.65
CAPN2-212ENST00000498027 ZNF34Q8IZ26 560 aa19.14■□□□□ 0.65
CAPN2-212ENST00000498027 RTCBQ9Y3I0 505 aaKnown RBP19.14■□□□□ 0.65
CAPN2-212ENST00000498027 ZBTB38Q8NAP3 1195 aaPredicted RBP19.13■□□□□ 0.65
CAPN2-212ENST00000498027 NOP58Q9Y2X3 529 aaKnown RBP19.13■□□□□ 0.65
CAPN2-212ENST00000498027 KCNQ4P56696 695 aa19.12■□□□□ 0.65
CAPN2-212ENST00000498027 PARP10Q53GL7 1025 aa19.12■□□□□ 0.65
CAPN2-212ENST00000498027 LNPKQ9C0E8 428 aa19.12■□□□□ 0.65
CAPN2-212ENST00000498027 MYH14Q7Z406 1995 aaKnown RBP19.12■□□□□ 0.65
CAPN2-212ENST00000498027 AFDNP55196 1824 aaKnown RBP19.12■□□□□ 0.65
CAPN2-212ENST00000498027 CDHR2Q9BYE9 1310 aa19.11■□□□□ 0.65
CAPN2-212ENST00000498027 GNPATO15228 680 aa19.11■□□□□ 0.65
CAPN2-212ENST00000498027 SKAP1Q86WV1 359 aa19.11■□□□□ 0.65
CAPN2-212ENST00000498027 PLA2G12BQ9BX93 195 aa19.11■□□□□ 0.65
CAPN2-212ENST00000498027 PDE4AP27815 886 aa19.1■□□□□ 0.65
CAPN2-212ENST00000498027 AK7Q96M32 723 aa19.1■□□□□ 0.65
CAPN2-212ENST00000498027 LRRCC1Q9C099 1032 aa19.1■□□□□ 0.65
CAPN2-212ENST00000498027 LRRC4BQ9NT99 713 aa19.1■□□□□ 0.65
CAPN2-212ENST00000498027 NARFQ9UHQ1 456 aa19.1■□□□□ 0.65
CAPN2-212ENST00000498027 SURF6O75683 361 aaKnown RBP19.09■□□□□ 0.65
CAPN2-212ENST00000498027 GPTP24298 496 aa19.09■□□□□ 0.65
CAPN2-212ENST00000498027 ERC1Q8IUD2 1116 aa19.09■□□□□ 0.65
CAPN2-212ENST00000498027 C4BP0C0L5 1744 aa19.09■□□□□ 0.65
CAPN2-212ENST00000498027 HSP90B1P14625 803 aaKnown RBP19.08■□□□□ 0.65
CAPN2-212ENST00000498027 FOXO4P98177 505 aa19.08■□□□□ 0.65
CAPN2-212ENST00000498027 TXNRD1Q16881 649 aa19.08■□□□□ 0.65
CAPN2-212ENST00000498027 EPHA10Q5JZY3 1008 aa19.08■□□□□ 0.65
CAPN2-212ENST00000498027 EXOC6BQ9Y2D4 811 aa19.08■□□□□ 0.65
CAPN2-212ENST00000498027 APBA3O96018 575 aa19.08■□□□□ 0.64
CAPN2-212ENST00000498027 TRAPPC3LQ5T215 181 aa19.08■□□□□ 0.64
CAPN2-212ENST00000498027 KIF1BPQ96EK5 621 aa19.08■□□□□ 0.64
CAPN2-212ENST00000498027 ANKRD36CQ5JPF3 1778 aa19.08■□□□□ 0.64
CAPN2-212ENST00000498027 ZPR1O75312 459 aa19.07■□□□□ 0.64
CAPN2-212ENST00000498027 JARID2Q92833 1246 aaPredicted RBP19.07■□□□□ 0.64
CAPN2-212ENST00000498027 COPRSQ9NQ92 184 aa19.07■□□□□ 0.64
CAPN2-212ENST00000498027 TRMT112Q9UI30 125 aaKnown RBP19.07■□□□□ 0.64
CAPN2-212ENST00000498027 TAF1LQ8IZX4 1826 aa19.07■□□□□ 0.64
CAPN2-212ENST00000498027 UBN2Q6ZU65 1347 aa19.06■□□□□ 0.64
CAPN2-212ENST00000498027 LMBR1LQ6UX01 489 aa19.06■□□□□ 0.64
CAPN2-212ENST00000498027 UTP14AQ9BVJ6 771 aaKnown RBP19.06■□□□□ 0.64
CAPN2-212ENST00000498027 NIP7Q9Y221 180 aaKnown RBP eCLIP19.06■□□□□ 0.64
CAPN2-212ENST00000498027 BCORQ6W2J9 1755 aa19.05■□□□□ 0.64
CAPN2-212ENST00000498027 SSFA2P28290 1259 aa19.05■□□□□ 0.64
CAPN2-212ENST00000498027 G3BP1Q13283 466 aaKnown RBP eCLIP19.05■□□□□ 0.64
CAPN2-212ENST00000498027 ARHGEF1Q92888 912 aaKnown RBP19.05■□□□□ 0.64
CAPN2-212ENST00000498027 FAM89AQ96GI7 184 aa19.05■□□□□ 0.64
CAPN2-212ENST00000498027 NUP98P52948 1817 aa19.05■□□□□ 0.64
CAPN2-212ENST00000498027 SH3TC1Q8TE82 1336 aa19.04■□□□□ 0.64
CAPN2-212ENST00000498027 RFC4P35249 363 aa19.04■□□□□ 0.64
CAPN2-212ENST00000498027 RFX5P48382 616 aaPredicted RBP19.04■□□□□ 0.64
CAPN2-212ENST00000498027 OS9Q13438 667 aaPredicted RBP19.04■□□□□ 0.64
CAPN2-212ENST00000498027 PROM2Q8N271 834 aa19.04■□□□□ 0.64
CAPN2-212ENST00000498027 RHPN1Q8TCX5 695 aa19.04■□□□□ 0.64
CAPN2-212ENST00000498027 APBB1O00213 710 aa19.03■□□□□ 0.64
CAPN2-212ENST00000498027 IRS4O14654 1257 aaPredicted RBP19.03■□□□□ 0.64
CAPN2-212ENST00000498027 CSF1RP07333 972 aa19.03■□□□□ 0.64
CAPN2-212ENST00000498027 FAM161AQ3B820 660 aa19.03■□□□□ 0.64
CAPN2-212ENST00000498027 RTL5Q5HYW3 569 aaPredicted RBP19.03■□□□□ 0.64
CAPN2-212ENST00000498027 SUSD4Q5VX71 490 aa19.03■□□□□ 0.64
CAPN2-212ENST00000498027 SCN7AQ01118 1682 aa19.03■□□□□ 0.64
CAPN2-212ENST00000498027 USP42Q9H9J4 1324 aaKnown RBP19.03■□□□□ 0.64
CAPN2-212ENST00000498027 SMARCA5O60264 1052 aaPredicted RBP19.02■□□□□ 0.64
CAPN2-212ENST00000498027 PDE8AO60658 829 aa19.02■□□□□ 0.64
CAPN2-212ENST00000498027 USPL1Q5W0Q7 1092 aa19.02■□□□□ 0.64
CAPN2-212ENST00000498027 PLEKHM2Q8IWE5 1019 aa19.02■□□□□ 0.64
CAPN2-212ENST00000498027 BCL2L12Q9HB09 334 aa19.02■□□□□ 0.64
CAPN2-212ENST00000498027 PTPN12Q05209 780 aaKnown RBP19.01■□□□□ 0.63
CAPN2-212ENST00000498027 OSBPL3Q9H4L5 887 aa19.01■□□□□ 0.63
CAPN2-212ENST00000498027 TSHZ2Q9NRE2 1034 aa19.01■□□□□ 0.63
CAPN2-212ENST00000498027 FBXO3Q9UK99 471 aa19.01■□□□□ 0.63
CAPN2-212ENST00000498027 RGPD3A6NKT7 1758 aaPredicted RBP19■□□□□ 0.63
CAPN2-212ENST00000498027 RGPD4Q7Z3J3 1758 aa19■□□□□ 0.63
CAPN2-212ENST00000498027 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19■□□□□ 0.63
CAPN2-212ENST00000498027 NTSR2O95665 410 aa19■□□□□ 0.63
CAPN2-212ENST00000498027 CTSWP56202 376 aa19■□□□□ 0.63
CAPN2-212ENST00000498027 BMP2KLQ5H9B9 411 aa19■□□□□ 0.63
CAPN2-212ENST00000498027 NYXQ9GZU5 481 aa19■□□□□ 0.63
CAPN2-212ENST00000498027 PA2G4Q9UQ80 394 aaKnown RBP19■□□□□ 0.63
CAPN2-212ENST00000498027 CHMP3Q9Y3E7 222 aa19■□□□□ 0.63
CAPN2-212ENST00000498027 CCDC57Q2TAC2 916 aa19■□□□□ 0.63
CAPN2-212ENST00000498027 SETDB2Q96T68 719 aa19■□□□□ 0.63
CAPN2-212ENST00000498027 BACH2Q9BYV9 841 aa19■□□□□ 0.63
CAPN2-212ENST00000498027 SRP68Q9UHB9 627 aaKnown RBP19■□□□□ 0.63
CAPN2-212ENST00000498027 TNS1Q9HBL0 1735 aaKnown RBP18.99■□□□□ 0.63
CAPN2-212ENST00000498027 PHF14O94880 888 aa18.99■□□□□ 0.63
CAPN2-212ENST00000498027 TBC1D9BQ66K14 1250 aa18.99■□□□□ 0.63
CAPN2-212ENST00000498027 AMIGO3Q86WK7 504 aa18.99■□□□□ 0.63
CAPN2-212ENST00000498027 C16orf71Q8IYS4 520 aaPredicted RBP18.99■□□□□ 0.63
CAPN2-212ENST00000498027 CLASRPQ8N2M8 674 aaKnown RBP18.99■□□□□ 0.63
CAPN2-212ENST00000498027 FLAD1Q8NFF5 587 aa18.99■□□□□ 0.63
CAPN2-212ENST00000498027 AOX1Q06278 1338 aa18.98■□□□□ 0.63
CAPN2-212ENST00000498027 CIAO1O76071 339 aa18.98■□□□□ 0.63
CAPN2-212ENST00000498027 IFIT5Q13325 482 aaKnown RBP18.98■□□□□ 0.63
CAPN2-212ENST00000498027 TTLL11Q8NHH1 800 aa18.98■□□□□ 0.63
CAPN2-212ENST00000498027 AKT1S1Q96B36 256 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms