RNA–Protein interactions for RNA: ENST00000497483.1

HDAC10-219, Transcript of histone deacetylase 10, human

TSL 2

Gene HDAC10, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC10-219	ENST00000497483	HSP90AB3P	Q58FF7	597 aa		32.28	■■■□□ 2.76
HDAC10-219	ENST00000497483	RBM46	Q8TBY0	533 aa	Known RBP	32.28	■■■□□ 2.76
HDAC10-219	ENST00000497483	CCDC184	Q52MB2	194 aa		32.27	■■■□□ 2.76
HDAC10-219	ENST00000497483	CHPF2	Q9P2E5	772 aa		32.27	■■■□□ 2.76
HDAC10-219	ENST00000497483	SNED1	Q8TER0	1413 aa		32.26	■■■□□ 2.76
HDAC10-219	ENST00000497483	GNAI1	P63096	354 aa		32.26	■■■□□ 2.75
HDAC10-219	ENST00000497483	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.26	■■■□□ 2.75
HDAC10-219	ENST00000497483	HOXA10	P31260	410 aa	Predicted RBP	32.25	■■■□□ 2.75
HDAC10-219	ENST00000497483	RRAGC	Q9HB90	399 aa		32.25	■■■□□ 2.75
HDAC10-219	ENST00000497483	DBF4	Q9UBU7	674 aa	Predicted RBP	32.25	■■■□□ 2.75
HDAC10-219	ENST00000497483	AIMP1	Q12904	312 aa	Known RBP	32.24	■■■□□ 2.75
HDAC10-219	ENST00000497483	DUSP27	Q5VZP5	1158 aa		32.24	■■■□□ 2.75
HDAC10-219	ENST00000497483	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.23	■■■□□ 2.75
HDAC10-219	ENST00000497483	RPGR	Q92834	1020 aa	Known RBP	32.23	■■■□□ 2.75
HDAC10-219	ENST00000497483	UTP14A	Q9BVJ6	771 aa	Known RBP	32.23	■■■□□ 2.75
HDAC10-219	ENST00000497483	RTKN2	Q8IZC4	609 aa		32.22	■■■□□ 2.75
HDAC10-219	ENST00000497483	TCIRG1	Q13488	830 aa		32.21	■■■□□ 2.75
HDAC10-219	ENST00000497483	SLC10A5	Q5PT55	438 aa		32.2	■■■□□ 2.75
HDAC10-219	ENST00000497483	DPY19L2	Q6NUT2	758 aa		32.2	■■■□□ 2.75
HDAC10-219	ENST00000497483	NLRP10	Q86W26	655 aa		32.2	■■■□□ 2.75
HDAC10-219	ENST00000497483	VEGFA	P15692	232 aa	Predicted RBP	32.19	■■■□□ 2.74
HDAC10-219	ENST00000497483	FSTL1	Q12841	308 aa		32.19	■■■□□ 2.74
HDAC10-219	ENST00000497483	PLBD2	Q8NHP8	589 aa		32.19	■■■□□ 2.74
HDAC10-219	ENST00000497483	CRAMP1	Q96RY5	1269 aa		32.19	■■■□□ 2.74
HDAC10-219	ENST00000497483	HYPK	Q9NX55	129 aa		32.19	■■■□□ 2.74
HDAC10-219	ENST00000497483	DDX60	Q8IY21	1712 aa	Known RBP	32.18	■■■□□ 2.74
HDAC10-219	ENST00000497483	ANP32C	O43423	234 aa		32.18	■■■□□ 2.74
HDAC10-219	ENST00000497483	CCDC27	Q2M243	656 aa		32.18	■■■□□ 2.74
HDAC10-219	ENST00000497483	CC2D2B	Q6DHV5	1058 aa		32.18	■■■□□ 2.74
HDAC10-219	ENST00000497483	OLFM4	Q6UX06	510 aa		32.18	■■■□□ 2.74
HDAC10-219	ENST00000497483	C3orf67	Q6ZVT6	689 aa		32.17	■■■□□ 2.74
HDAC10-219	ENST00000497483	RBM17	Q96I25	401 aa	Known RBP	32.17	■■■□□ 2.74
HDAC10-219	ENST00000497483	NLRP3	Q96P20	1036 aa		32.17	■■■□□ 2.74
HDAC10-219	ENST00000497483	APLP1	P51693	650 aa		32.16	■■■□□ 2.74
HDAC10-219	ENST00000497483	PSMD1	Q99460	953 aa		32.16	■■■□□ 2.74
HDAC10-219	ENST00000497483	SCN4A	P35499	1836 aa		32.15	■■■□□ 2.74
HDAC10-219	ENST00000497483	ANKRD13D	Q6ZTN6	518 aa		32.15	■■■□□ 2.74
HDAC10-219	ENST00000497483	MRS2	Q9HD23	443 aa		32.15	■■■□□ 2.74
HDAC10-219	ENST00000497483	GRIPAP1	Q4V328	841 aa		32.14	■■■□□ 2.74
HDAC10-219	ENST00000497483	NCBP3	Q53F19	620 aa	Known RBP	32.14	■■■□□ 2.74
HDAC10-219	ENST00000497483	POTEC	B2RU33	542 aa		32.13	■■■□□ 2.73
HDAC10-219	ENST00000497483	SH3TC1	Q8TE82	1336 aa		32.13	■■■□□ 2.73
HDAC10-219	ENST00000497483	SMC1B	Q8NDV3	1235 aa		32.12	■■■□□ 2.73
HDAC10-219	ENST00000497483	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.12	■■■□□ 2.73
HDAC10-219	ENST00000497483	PPEF1	O14829	653 aa	Predicted RBP	32.11	■■■□□ 2.73
HDAC10-219	ENST00000497483	IARS	P41252	1262 aa	Known RBP	32.11	■■■□□ 2.73
HDAC10-219	ENST00000497483	ISCA1	Q9BUE6	129 aa		32.11	■■■□□ 2.73
HDAC10-219	ENST00000497483	TRMT112	Q9UI30	125 aa	Known RBP	32.11	■■■□□ 2.73
HDAC10-219	ENST00000497483	C8orf58	Q8NAV2	365 aa		32.1	■■■□□ 2.73
HDAC10-219	ENST00000497483	CHMP4A	Q9BY43	222 aa		32.1	■■■□□ 2.73
HDAC10-219	ENST00000497483	SYNE4	Q8N205	404 aa		32.09	■■■□□ 2.73
HDAC10-219	ENST00000497483	ABCC4	O15439	1325 aa		32.08	■■■□□ 2.73
HDAC10-219	ENST00000497483	WWC1	Q8IX03	1113 aa		32.08	■■■□□ 2.73
HDAC10-219	ENST00000497483	LRRC37A	A6NMS7	1700 aa		32.08	■■■□□ 2.73
HDAC10-219	ENST00000497483	ELL2	O00472	640 aa	Predicted RBP	32.07	■■■□□ 2.72
HDAC10-219	ENST00000497483	DDN	O94850	711 aa	Predicted RBP	32.07	■■■□□ 2.72
HDAC10-219	ENST00000497483	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32.07	■■■□□ 2.72
HDAC10-219	ENST00000497483	IL16	Q14005	1332 aa		32.06	■■■□□ 2.72
HDAC10-219	ENST00000497483	COL4A5	P29400	1685 aa		32.06	■■■□□ 2.72
HDAC10-219	ENST00000497483	HCLS1	P14317	486 aa	Predicted RBP	32.06	■■■□□ 2.72
HDAC10-219	ENST00000497483	TRIM28	Q13263	835 aa	Known RBP	32.06	■■■□□ 2.72
HDAC10-219	ENST00000497483	TAF1	P21675	1872 aa		32.06	■■■□□ 2.72
HDAC10-219	ENST00000497483	GOLGA2	Q08379	1002 aa		32.05	■■■□□ 2.72
HDAC10-219	ENST00000497483	ZNF541	Q9H0D2	1346 aa		32.04	■■■□□ 2.72
HDAC10-219	ENST00000497483	FZD9	O00144	591 aa		32.04	■■■□□ 2.72
HDAC10-219	ENST00000497483	CCDC30	Q5VVM6	783 aa		32.04	■■■□□ 2.72
HDAC10-219	ENST00000497483	PHAX	Q9H814	394 aa	Known RBP	32.04	■■■□□ 2.72
HDAC10-219	ENST00000497483	ATP6V0A2	Q9Y487	856 aa		32.04	■■■□□ 2.72
HDAC10-219	ENST00000497483	TSR2	Q969E8	191 aa	Known RBP	32.03	■■■□□ 2.72
HDAC10-219	ENST00000497483	ATP5J2-PTCD1	G3V325	749 aa		32.02	■■■□□ 2.72
HDAC10-219	ENST00000497483	RIC3	Q7Z5B4	369 aa		32.02	■■■□□ 2.72
HDAC10-219	ENST00000497483	SLC51A	Q86UW1	340 aa		32.02	■■■□□ 2.72
HDAC10-219	ENST00000497483	TSPYL6	Q8N831	410 aa		32.02	■■■□□ 2.72
HDAC10-219	ENST00000497483	CACNA1F	O60840	1977 aa		32.01	■■■□□ 2.72
HDAC10-219	ENST00000497483	IQCA1L	A6NCM1	817 aa		32.01	■■■□□ 2.71
HDAC10-219	ENST00000497483	BBOX1	O75936	387 aa		32.01	■■■□□ 2.71
HDAC10-219	ENST00000497483	DDX46	Q7L014	1031 aa	Known RBP	32	■■■□□ 2.71
HDAC10-219	ENST00000497483	JDP2	Q8WYK2	163 aa		32	■■■□□ 2.71
HDAC10-219	ENST00000497483	TMX4	Q9H1E5	349 aa	Predicted RBP	32	■■■□□ 2.71
HDAC10-219	ENST00000497483	GRAP	Q13588	217 aa		31.99	■■■□□ 2.71
HDAC10-219	ENST00000497483	GRAPL	Q8TC17	118 aa	Predicted RBP	31.99	■■■□□ 2.71
HDAC10-219	ENST00000497483	FAM89A	Q96GI7	184 aa		31.99	■■■□□ 2.71
HDAC10-219	ENST00000497483	ADAMTSL1	Q8N6G6	1762 aa		31.99	■■■□□ 2.71
HDAC10-219	ENST00000497483	VPS33B	Q9H267	617 aa		31.98	■■■□□ 2.71
HDAC10-219	ENST00000497483	TCERG1	O14776	1098 aa	Known RBP	31.97	■■■□□ 2.71
HDAC10-219	ENST00000497483	SF3B3	Q15393	1217 aa	Known RBP	31.97	■■■□□ 2.71
HDAC10-219	ENST00000497483	SP8	Q8IXZ3	490 aa		31.97	■■■□□ 2.71
HDAC10-219	ENST00000497483	DNAJC5G	Q8N7S2	189 aa		31.97	■■■□□ 2.71
HDAC10-219	ENST00000497483	RTFDC1	Q9BY42	306 aa	Predicted RBP	31.97	■■■□□ 2.71
HDAC10-219	ENST00000497483	DDX58	O95786	925 aa	Known RBP	31.96	■■■□□ 2.71
HDAC10-219	ENST00000497483	TMC4	Q7Z404	712 aa		31.96	■■■□□ 2.71
HDAC10-219	ENST00000497483	GPC2	Q8N158	579 aa		31.96	■■■□□ 2.71
HDAC10-219	ENST00000497483	DUOX1	Q9NRD9	1551 aa		31.96	■■■□□ 2.71
HDAC10-219	ENST00000497483	LARGE2	Q8N3Y3	721 aa		31.95	■■■□□ 2.71
HDAC10-219	ENST00000497483	SUPT20H	Q8NEM7	779 aa		31.95	■■■□□ 2.71
HDAC10-219	ENST00000497483	ZNF428	Q96B54	188 aa		31.95	■■■□□ 2.71
HDAC10-219	ENST00000497483	TWISTNB	Q3B726	338 aa	Predicted RBP	31.94	■■■□□ 2.7
HDAC10-219	ENST00000497483	WDR63	Q8IWG1	891 aa		31.94	■■■□□ 2.7
HDAC10-219	ENST00000497483	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	31.94	■■■□□ 2.7
HDAC10-219	ENST00000497483	CCDC191	Q8NCU4	936 aa		31.94	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms