RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 ARHGAP27Q6ZUM4 889 aa29.12■■■□□ 2.25
CHRD-217ENST00000496527 TRMT112Q9UI30 125 aaKnown RBP29.12■■■□□ 2.25
CHRD-217ENST00000496527 RNF123Q5XPI4 1314 aa29.12■■■□□ 2.25
CHRD-217ENST00000496527 G2E3Q7L622 706 aa29.11■■■□□ 2.25
CHRD-217ENST00000496527 CNKSR1Q969H4 720 aa29.11■■■□□ 2.25
CHRD-217ENST00000496527 GOLGB1Q14789 3259 aaKnown RBP29.11■■■□□ 2.25
CHRD-217ENST00000496527 CHD4Q14839 1912 aa29.1■■■□□ 2.25
CHRD-217ENST00000496527 NPR1P16066 1061 aa29.1■■■□□ 2.25
CHRD-217ENST00000496527 KSR2Q6VAB6 950 aa29.1■■■□□ 2.25
CHRD-217ENST00000496527 MYD88Q99836 296 aa29.1■■■□□ 2.25
CHRD-217ENST00000496527 MAP3K2Q9Y2U5 619 aa29.1■■■□□ 2.25
CHRD-217ENST00000496527 ARFGEF2Q9Y6D5 1785 aa29.09■■■□□ 2.25
CHRD-217ENST00000496527 PI4KAP2A4QPH2 592 aa29.09■■■□□ 2.25
CHRD-217ENST00000496527 FLIIQ13045 1269 aa29.09■■■□□ 2.25
CHRD-217ENST00000496527 TRIM28Q13263 835 aaKnown RBP29.09■■■□□ 2.25
CHRD-217ENST00000496527 PI4KAP1Q8N8J0 262 aa29.09■■■□□ 2.25
CHRD-217ENST00000496527 METTL22Q9BUU2 404 aaPredicted RBP29.09■■■□□ 2.25
CHRD-217ENST00000496527 COL11A2P13942 1736 aaPredicted RBP29.08■■■□□ 2.25
CHRD-217ENST00000496527 SLC10A5Q5PT55 438 aa29.08■■■□□ 2.25
CHRD-217ENST00000496527 ZNF428Q96B54 188 aa29.08■■■□□ 2.25
CHRD-217ENST00000496527 SH3TC1Q8TE82 1336 aa29.08■■■□□ 2.25
CHRD-217ENST00000496527 ARFGEF1Q9Y6D6 1849 aa29.08■■■□□ 2.25
CHRD-217ENST00000496527 UTRNP46939 3433 aa29.07■■■□□ 2.24
CHRD-217ENST00000496527 HNRNPUQ00839 825 aaKnown RBP eCLIP29.07■■■□□ 2.24
CHRD-217ENST00000496527 RIC1Q4ADV7 1423 aa29.07■■■□□ 2.24
CHRD-217ENST00000496527 FKBP5Q13451 457 aaPredicted RBP29.06■■■□□ 2.24
CHRD-217ENST00000496527 TRMT2AQ8IZ69 625 aaKnown RBP29.06■■■□□ 2.24
CHRD-217ENST00000496527 NLRP3Q96P20 1036 aa29.06■■■□□ 2.24
CHRD-217ENST00000496527 CRY2Q49AN0 593 aa29.05■■■□□ 2.24
CHRD-217ENST00000496527 CACNA1FO60840 1977 aa29.04■■■□□ 2.24
CHRD-217ENST00000496527 ADCY9O60503 1353 aa29.04■■■□□ 2.24
CHRD-217ENST00000496527 NEXNQ0ZGT2 675 aa29.04■■■□□ 2.24
CHRD-217ENST00000496527 PRPF40BQ6NWY9 871 aaKnown RBP29.04■■■□□ 2.24
CHRD-217ENST00000496527 SYNE4Q8N205 404 aa29.04■■■□□ 2.24
CHRD-217ENST00000496527 RPGRQ92834 1020 aaKnown RBP29.04■■■□□ 2.24
CHRD-217ENST00000496527 TNRC6CQ9HCJ0 1690 aaKnown RBP29.03■■■□□ 2.24
CHRD-217ENST00000496527 HCLS1P14317 486 aaPredicted RBP29.03■■■□□ 2.24
CHRD-217ENST00000496527 ALDH1B1P30837 517 aa29.03■■■□□ 2.24
CHRD-217ENST00000496527 CCDC191Q8NCU4 936 aa29.03■■■□□ 2.24
CHRD-217ENST00000496527 ZNF219Q9P2Y4 722 aaPredicted RBP29.03■■■□□ 2.24
CHRD-217ENST00000496527 C21orf2O43822 256 aa29.02■■■□□ 2.24
CHRD-217ENST00000496527 FAM89AQ96GI7 184 aa29.02■■■□□ 2.24
CHRD-217ENST00000496527 CWC25Q9NXE8 425 aaPredicted RBP29.02■■■□□ 2.24
CHRD-217ENST00000496527 C3orf67Q6ZVT6 689 aa29.01■■■□□ 2.23
CHRD-217ENST00000496527 RBM17Q96I25 401 aaKnown RBP29.01■■■□□ 2.23
CHRD-217ENST00000496527 HOXA10P31260 410 aaPredicted RBP28.99■■■□□ 2.23
CHRD-217ENST00000496527 RTL5Q5HYW3 569 aaPredicted RBP28.99■■■□□ 2.23
CHRD-217ENST00000496527 ZBTB38Q8NAP3 1195 aaPredicted RBP28.99■■■□□ 2.23
CHRD-217ENST00000496527 DNAAF4Q8WXU2 420 aa28.99■■■□□ 2.23
CHRD-217ENST00000496527 SOGA3Q5TF21 947 aa28.98■■■□□ 2.23
CHRD-217ENST00000496527 SLX4Q8IY92 1834 aa28.97■■■□□ 2.23
CHRD-217ENST00000496527 IGKV5-2P06315 115 aa28.97■■■□□ 2.23
CHRD-217ENST00000496527 CRAMP1Q96RY5 1269 aa28.97■■■□□ 2.23
CHRD-217ENST00000496527 IRS4O14654 1257 aaPredicted RBP28.96■■■□□ 2.23
CHRD-217ENST00000496527 PCCAP05165 728 aaPredicted RBP28.96■■■□□ 2.23
CHRD-217ENST00000496527 CT47B1P0C2W7 299 aaPredicted RBP28.96■■■□□ 2.23
CHRD-217ENST00000496527 HSP90B1P14625 803 aaKnown RBP28.96■■■□□ 2.23
CHRD-217ENST00000496527 CWF19L2Q2TBE0 894 aaKnown RBP28.95■■■□□ 2.22
CHRD-217ENST00000496527 MRPL50Q8N5N7 158 aaKnown RBP28.95■■■□□ 2.22
CHRD-217ENST00000496527 CACNA1SQ13698 1873 aa28.94■■■□□ 2.22
CHRD-217ENST00000496527 NEURL1BA8MQ27 555 aa28.94■■■□□ 2.22
CHRD-217ENST00000496527 C7orf43Q8WVR3 580 aa28.94■■■□□ 2.22
CHRD-217ENST00000496527 SSH1Q8WYL5 1049 aa28.94■■■□□ 2.22
CHRD-217ENST00000496527 F6X3S4 739 aa28.93■■■□□ 2.22
CHRD-217ENST00000496527 RASSF7Q02833 373 aa28.93■■■□□ 2.22
CHRD-217ENST00000496527 ALDH1L2Q3SY69 923 aa28.93■■■□□ 2.22
CHRD-217ENST00000496527 CCDC93Q567U6 631 aa28.92■■■□□ 2.22
CHRD-217ENST00000496527 C9orf131Q5VYM1 1079 aa28.92■■■□□ 2.22
CHRD-217ENST00000496527 DDX46Q7L014 1031 aaKnown RBP28.92■■■□□ 2.22
CHRD-217ENST00000496527 LINS1Q8NG48 757 aa28.92■■■□□ 2.22
CHRD-217ENST00000496527 JARID2Q92833 1246 aaPredicted RBP28.92■■■□□ 2.22
CHRD-217ENST00000496527 NFKBIEO00221 500 aa28.91■■■□□ 2.22
CHRD-217ENST00000496527 ZNF784Q8NCA9 323 aaPredicted RBP28.91■■■□□ 2.22
CHRD-217ENST00000496527 RNF181Q9P0P0 153 aa28.91■■■□□ 2.22
CHRD-217ENST00000496527 SF3B3Q15393 1217 aaKnown RBP28.9■■■□□ 2.22
CHRD-217ENST00000496527 BCL2L13Q9BXK5 485 aa28.9■■■□□ 2.22
CHRD-217ENST00000496527 DDX60Q8IY21 1712 aaKnown RBP28.89■■■□□ 2.22
CHRD-217ENST00000496527 PPEF1O14829 653 aaPredicted RBP28.89■■■□□ 2.22
CHRD-217ENST00000496527 LMNB1P20700 586 aa28.89■■■□□ 2.22
CHRD-217ENST00000496527 GCKRQ14397 625 aa28.89■■■□□ 2.22
CHRD-217ENST00000496527 TAOK3Q9H2K8 898 aa28.89■■■□□ 2.22
CHRD-217ENST00000496527 SMC4Q9NTJ3 1288 aa28.89■■■□□ 2.22
CHRD-217ENST00000496527 ABCC4O15439 1325 aa28.89■■■□□ 2.21
CHRD-217ENST00000496527 ZBED9Q6R2W3 1325 aa28.89■■■□□ 2.21
CHRD-217ENST00000496527 CDHR2Q9BYE9 1310 aa28.89■■■□□ 2.21
CHRD-217ENST00000496527 PDE8AO60658 829 aa28.88■■■□□ 2.21
CHRD-217ENST00000496527 CC2D2BQ6DHV5 1058 aa28.88■■■□□ 2.21
CHRD-217ENST00000496527 OLFM4Q6UX06 510 aa28.88■■■□□ 2.21
CHRD-217ENST00000496527 RTKN2Q8IZC4 609 aa28.88■■■□□ 2.21
CHRD-217ENST00000496527 LAMB2P55268 1798 aa28.88■■■□□ 2.21
CHRD-217ENST00000496527 BEND3Q5T5X7 828 aa28.87■■■□□ 2.21
CHRD-217ENST00000496527 SLC4A10Q6U841 1118 aa28.87■■■□□ 2.21
CHRD-217ENST00000496527 TMX4Q9H1E5 349 aaPredicted RBP28.87■■■□□ 2.21
CHRD-217ENST00000496527 PTPRCP08575 1304 aa28.87■■■□□ 2.21
CHRD-217ENST00000496527 H7C1W4 665 aa28.86■■■□□ 2.21
CHRD-217ENST00000496527 BBOX1O75936 387 aa28.86■■■□□ 2.21
CHRD-217ENST00000496527 GRAPQ13588 217 aa28.86■■■□□ 2.21
CHRD-217ENST00000496527 GRAPLQ8TC17 118 aaPredicted RBP28.86■■■□□ 2.21
CHRD-217ENST00000496527 LTBP3Q9NS15 1303 aa28.86■■■□□ 2.21
CHRD-217ENST00000496527 UBE3BQ7Z3V4 1068 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms