RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.79■□□□□ 0.28
SPTBN1-205ENST00000496323 MEX3CQ5U5Q3 659 aaKnown RBP16.78■□□□□ 0.28
SPTBN1-205ENST00000496323 PTF1AQ7RTS3 328 aa16.78■□□□□ 0.28
SPTBN1-205ENST00000496323 EAF2Q96CJ1 260 aaPredicted RBP16.78■□□□□ 0.28
SPTBN1-205ENST00000496323 AFDNP55196 1824 aaKnown RBP16.77■□□□□ 0.28
SPTBN1-205ENST00000496323 CRKLP46109 303 aaKnown RBP16.77■□□□□ 0.28
SPTBN1-205ENST00000496323 EIF5P55010 431 aaKnown RBP16.77■□□□□ 0.28
SPTBN1-205ENST00000496323 KIF2CQ99661 725 aa16.77■□□□□ 0.28
SPTBN1-205ENST00000496323 CCDC87Q9NVE4 849 aa16.77■□□□□ 0.28
SPTBN1-205ENST00000496323 AFF2P51816 1311 aa16.77■□□□□ 0.27
SPTBN1-205ENST00000496323 AACSQ86V21 672 aa16.77■□□□□ 0.27
SPTBN1-205ENST00000496323 SMARCC1Q92922 1105 aaPredicted RBP16.77■□□□□ 0.27
SPTBN1-205ENST00000496323 GJD4Q96KN9 370 aaPredicted RBP16.77■□□□□ 0.27
SPTBN1-205ENST00000496323 TBC1D2BQ9UPU7 963 aa16.77■□□□□ 0.27
SPTBN1-205ENST00000496323 TTC41PQ6P2S7 1318 aa16.76■□□□□ 0.27
SPTBN1-205ENST00000496323 TRIM6-TRIM34B2RNG4 842 aa16.76■□□□□ 0.27
SPTBN1-205ENST00000496323 CASC1Q6TDU7 716 aa16.76■□□□□ 0.27
SPTBN1-205ENST00000496323 RILPL2Q969X0 211 aa16.76■□□□□ 0.27
SPTBN1-205ENST00000496323 ERVV-1B6SEH8 477 aa16.76■□□□□ 0.27
SPTBN1-205ENST00000496323 IFIT2P09913 472 aaKnown RBP16.76■□□□□ 0.27
SPTBN1-205ENST00000496323 NLRP10Q86W26 655 aa16.76■□□□□ 0.27
SPTBN1-205ENST00000496323 DZIP3Q86Y13 1208 aaKnown RBP16.76■□□□□ 0.27
SPTBN1-205ENST00000496323 MAP4K4O95819 1239 aaPredicted RBP16.75■□□□□ 0.27
SPTBN1-205ENST00000496323 PCCAP05165 728 aaPredicted RBP16.75■□□□□ 0.27
SPTBN1-205ENST00000496323 GPTP24298 496 aa16.75■□□□□ 0.27
SPTBN1-205ENST00000496323 ZBTB38Q8NAP3 1195 aaPredicted RBP16.75■□□□□ 0.27
SPTBN1-205ENST00000496323 FAM89AQ96GI7 184 aa16.75■□□□□ 0.27
SPTBN1-205ENST00000496323 USP26Q9BXU7 913 aa16.75■□□□□ 0.27
SPTBN1-205ENST00000496323 DAXXQ9UER7 740 aaPredicted RBP16.75■□□□□ 0.27
SPTBN1-205ENST00000496323 THSD7AQ9UPZ6 1657 aa16.75■□□□□ 0.27
SPTBN1-205ENST00000496323 CHMLP26374 656 aa16.74■□□□□ 0.27
SPTBN1-205ENST00000496323 TBC1D2Q9BYX2 928 aa16.74■□□□□ 0.27
SPTBN1-205ENST00000496323 ECHDC1Q9NTX5 307 aa16.74■□□□□ 0.27
SPTBN1-205ENST00000496323 TLR7Q9NYK1 1049 aaKnown RBP16.74■□□□□ 0.27
SPTBN1-205ENST00000496323 CHMP3Q9Y3E7 222 aa16.74■□□□□ 0.27
SPTBN1-205ENST00000496323 HSP90AB3PQ58FF7 597 aa16.74■□□□□ 0.27
SPTBN1-205ENST00000496323 FAM182BQ5T319 152 aa16.74■□□□□ 0.27
SPTBN1-205ENST00000496323 SYNE4Q8N205 404 aa16.74■□□□□ 0.27
SPTBN1-205ENST00000496323 CCDC8Q9H0W5 538 aaPredicted RBP16.74■□□□□ 0.27
SPTBN1-205ENST00000496323 EIF5BO60841 1220 aaKnown RBP16.73■□□□□ 0.27
SPTBN1-205ENST00000496323 GLRX3O76003 335 aaKnown RBP16.73■□□□□ 0.27
SPTBN1-205ENST00000496323 ERC2O15083 957 aa16.73■□□□□ 0.27
SPTBN1-205ENST00000496323 ONECUT3O60422 494 aaPredicted RBP16.73■□□□□ 0.27
SPTBN1-205ENST00000496323 TFCP2Q12800 502 aa16.73■□□□□ 0.27
SPTBN1-205ENST00000496323 BECN1Q14457 450 aa16.73■□□□□ 0.27
SPTBN1-205ENST00000496323 PLA2G12BQ9BX93 195 aa16.73■□□□□ 0.27
SPTBN1-205ENST00000496323 TUBGCP6Q96RT7 1819 aa16.73■□□□□ 0.27
SPTBN1-205ENST00000496323 KAT6BQ8WYB5 2073 aa16.73■□□□□ 0.27
SPTBN1-205ENST00000496323 ATG9AQ7Z3C6 839 aa16.72■□□□□ 0.27
SPTBN1-205ENST00000496323 ESYT1Q9BSJ8 1104 aa16.72■□□□□ 0.27
SPTBN1-205ENST00000496323 ANP32EQ9BTT0 268 aa16.72■□□□□ 0.27
SPTBN1-205ENST00000496323 ATRNO75882 1429 aa16.72■□□□□ 0.27
SPTBN1-205ENST00000496323 UBN2Q6ZU65 1347 aa16.72■□□□□ 0.27
SPTBN1-205ENST00000496323 ZNF34Q8IZ26 560 aa16.72■□□□□ 0.27
SPTBN1-205ENST00000496323 LINC00116Q8NCU8 138 aa16.72■□□□□ 0.27
SPTBN1-205ENST00000496323 CICQ96RK0 1608 aaPredicted RBP16.71■□□□□ 0.27
SPTBN1-205ENST00000496323 KCNQ4P56696 695 aa16.71■□□□□ 0.27
SPTBN1-205ENST00000496323 GPATCH3Q96I76 525 aa16.71■□□□□ 0.27
SPTBN1-205ENST00000496323 CAMTA2O94983 1202 aa16.7■□□□□ 0.26
SPTBN1-205ENST00000496323 REC8O95072 547 aa16.7■□□□□ 0.26
SPTBN1-205ENST00000496323 CSF1RP07333 972 aa16.7■□□□□ 0.26
SPTBN1-205ENST00000496323 TNNI3KQ59H18 835 aa16.7■□□□□ 0.26
SPTBN1-205ENST00000496323 ZNF594Q96JF6 807 aaPredicted RBP16.7■□□□□ 0.26
SPTBN1-205ENST00000496323 TRPC5Q9UL62 973 aaPredicted RBP16.7■□□□□ 0.26
SPTBN1-205ENST00000496323 FPGT-TNNI3KV9GXZ4 949 aa16.7■□□□□ 0.26
SPTBN1-205ENST00000496323 CDHR2Q9BYE9 1310 aa16.7■□□□□ 0.26
SPTBN1-205ENST00000496323 CNTROBQ8N137 903 aa16.7■□□□□ 0.26
SPTBN1-205ENST00000496323 IL25Q9H293 177 aa16.7■□□□□ 0.26
SPTBN1-205ENST00000496323 RREB1Q92766 1687 aa16.69■□□□□ 0.26
SPTBN1-205ENST00000496323 LRRC24Q50LG9 513 aa16.69■□□□□ 0.26
SPTBN1-205ENST00000496323 DBNLQ9UJU6 430 aaKnown RBP16.69■□□□□ 0.26
SPTBN1-205ENST00000496323 SEPT12Q8IYM1 358 aa16.68■□□□□ 0.26
SPTBN1-205ENST00000496323 CCDC85AQ96PX6 553 aaPredicted RBP16.68■□□□□ 0.26
SPTBN1-205ENST00000496323 TRMT112Q9UI30 125 aaKnown RBP16.68■□□□□ 0.26
SPTBN1-205ENST00000496323 EYA2O00167 538 aa16.68■□□□□ 0.26
SPTBN1-205ENST00000496323 IL15P40933 162 aaPredicted RBP16.68■□□□□ 0.26
SPTBN1-205ENST00000496323 PUS3Q9BZE2 481 aaKnown RBP16.68■□□□□ 0.26
SPTBN1-205ENST00000496323 IRS4O14654 1257 aaPredicted RBP16.67■□□□□ 0.26
SPTBN1-205ENST00000496323 CIAO1O76071 339 aa16.67■□□□□ 0.26
SPTBN1-205ENST00000496323 SNX21Q969T3 373 aa16.67■□□□□ 0.26
SPTBN1-205ENST00000496323 CCDC57Q2TAC2 916 aa16.66■□□□□ 0.26
SPTBN1-205ENST00000496323 SUSD4Q5VX71 490 aa16.66■□□□□ 0.26
SPTBN1-205ENST00000496323 TTLL11Q8NHH1 800 aa16.66■□□□□ 0.26
SPTBN1-205ENST00000496323 QTRT2Q9H974 415 aaKnown RBP16.66■□□□□ 0.26
SPTBN1-205ENST00000496323 DBNDD2Q9BQY9 259 aa16.66■□□□□ 0.26
SPTBN1-205ENST00000496323 BOLA2Q9H3K6 86 aa16.66■□□□□ 0.26
SPTBN1-205ENST00000496323 CNTNAP4Q9C0A0 1308 aa16.65■□□□□ 0.26
SPTBN1-205ENST00000496323 CD2BP2O95400 341 aaKnown RBP16.65■□□□□ 0.26
SPTBN1-205ENST00000496323 CTSWP56202 376 aa16.65■□□□□ 0.26
SPTBN1-205ENST00000496323 EVI5LQ96CN4 794 aa16.65■□□□□ 0.26
SPTBN1-205ENST00000496323 GREM2Q9H772 168 aa16.65■□□□□ 0.26
SPTBN1-205ENST00000496323 MYH14Q7Z406 1995 aaKnown RBP16.65■□□□□ 0.26
SPTBN1-205ENST00000496323 SGSM2O43147 1006 aa16.65■□□□□ 0.26
SPTBN1-205ENST00000496323 GPR108Q9NPR9 543 aa16.65■□□□□ 0.26
SPTBN1-205ENST00000496323 ZNF831Q5JPB2 1677 aa16.65■□□□□ 0.26
SPTBN1-205ENST00000496323 ATP5JP18859 108 aa16.64■□□□□ 0.25
SPTBN1-205ENST00000496323 IFIT5Q13325 482 aaKnown RBP16.64■□□□□ 0.25
SPTBN1-205ENST00000496323 ANO2Q9NQ90 1003 aa16.64■□□□□ 0.25
SPTBN1-205ENST00000496323 PDE8AO60658 829 aa16.64■□□□□ 0.25
SPTBN1-205ENST00000496323 SMIM5Q71RC9 77 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms