RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 RASSF10A6NK89 507 aa18.89■□□□□ 0.61
VARS-228ENST00000495010 LBX1P52954 281 aa18.89■□□□□ 0.61
VARS-228ENST00000495010 CRY2Q49AN0 593 aa18.89■□□□□ 0.61
VARS-228ENST00000495010 GRIPAP1Q4V328 841 aa18.89■□□□□ 0.61
VARS-228ENST00000495010 RBM17Q96I25 401 aaKnown RBP18.89■□□□□ 0.61
VARS-228ENST00000495010 TMX4Q9H1E5 349 aaPredicted RBP18.89■□□□□ 0.61
VARS-228ENST00000495010 MAP2K1Q02750 393 aaPredicted RBP18.88■□□□□ 0.61
VARS-228ENST00000495010 LARGE2Q8N3Y3 721 aa18.88■□□□□ 0.61
VARS-228ENST00000495010 MAP3K15Q6ZN16 1313 aa18.88■□□□□ 0.61
VARS-228ENST00000495010 LAMB4A4D0S4 1761 aa18.87■□□□□ 0.61
VARS-228ENST00000495010 MYL6BP14649 208 aa18.87■□□□□ 0.61
VARS-228ENST00000495010 GPTP24298 496 aa18.87■□□□□ 0.61
VARS-228ENST00000495010 PAXIP1Q6ZW49 1069 aaPredicted RBP18.87■□□□□ 0.61
VARS-228ENST00000495010 ABCC12Q96J65 1359 aa18.87■□□□□ 0.61
VARS-228ENST00000495010 WDR33Q9C0J8 1336 aaKnown RBP18.87■□□□□ 0.61
VARS-228ENST00000495010 ADAMTSL1Q8N6G6 1762 aa18.86■□□□□ 0.61
VARS-228ENST00000495010 TCERG1O14776 1098 aaKnown RBP18.86■□□□□ 0.61
VARS-228ENST00000495010 ZBTB3Q9H5J0 574 aa18.86■□□□□ 0.61
VARS-228ENST00000495010 DDX21Q9NR30 783 aaKnown RBP eCLIP18.86■□□□□ 0.61
VARS-228ENST00000495010 PPEF1O14829 653 aaPredicted RBP18.85■□□□□ 0.61
VARS-228ENST00000495010 HOXA10P31260 410 aaPredicted RBP18.85■□□□□ 0.61
VARS-228ENST00000495010 TTLL7Q6ZT98 887 aa18.85■□□□□ 0.61
VARS-228ENST00000495010 NIM1KQ8IY84 436 aa18.85■□□□□ 0.61
VARS-228ENST00000495010 BEGAINQ9BUH8 593 aa18.85■□□□□ 0.61
VARS-228ENST00000495010 EIF4A1P60842 406 aaKnown RBP18.84■□□□□ 0.61
VARS-228ENST00000495010 SUSD4Q5VX71 490 aa18.84■□□□□ 0.61
VARS-228ENST00000495010 PPP1R42Q7Z4L9 355 aa18.84■□□□□ 0.61
VARS-228ENST00000495010 CRAMP1Q96RY5 1269 aa18.84■□□□□ 0.61
VARS-228ENST00000495010 NUP98P52948 1817 aa18.84■□□□□ 0.61
VARS-228ENST00000495010 IBTKQ9P2D0 1353 aaPredicted RBP18.83■□□□□ 0.61
VARS-228ENST00000495010 HSPA8P11142 646 aaKnown RBP18.83■□□□□ 0.6
VARS-228ENST00000495010 EPS15P42566 896 aa18.83■□□□□ 0.6
VARS-228ENST00000495010 ECE1P42892 770 aa18.83■□□□□ 0.6
VARS-228ENST00000495010 GRM1Q13255 1194 aa18.83■□□□□ 0.6
VARS-228ENST00000495010 USP50Q70EL3 339 aaPredicted RBP18.83■□□□□ 0.6
VARS-228ENST00000495010 PPIP5K2O43314 1243 aa18.82■□□□□ 0.6
VARS-228ENST00000495010 NLRP3Q96P20 1036 aa18.82■□□□□ 0.6
VARS-228ENST00000495010 RIC1Q4ADV7 1423 aa18.82■□□□□ 0.6
VARS-228ENST00000495010 SNED1Q8TER0 1413 aa18.82■□□□□ 0.6
VARS-228ENST00000495010 UBN2Q6ZU65 1347 aa18.81■□□□□ 0.6
VARS-228ENST00000495010 SCNN1DP51172 638 aa18.81■□□□□ 0.6
VARS-228ENST00000495010 GIGYF2Q6Y7W6 1299 aaKnown RBP18.81■□□□□ 0.6
VARS-228ENST00000495010 ZNF34Q8IZ26 560 aa18.81■□□□□ 0.6
VARS-228ENST00000495010 PNNQ9H307 717 aaKnown RBP18.81■□□□□ 0.6
VARS-228ENST00000495010 MAPK8IP3Q9UPT6 1336 aa18.8■□□□□ 0.6
VARS-228ENST00000495010 NFE2L2Q16236 605 aa18.8■□□□□ 0.6
VARS-228ENST00000495010 PARP10Q53GL7 1025 aa18.8■□□□□ 0.6
VARS-228ENST00000495010 SUPT20HQ8NEM7 779 aa18.8■□□□□ 0.6
VARS-228ENST00000495010 CAPNS2Q96L46 248 aa18.8■□□□□ 0.6
VARS-228ENST00000495010 KDM3BQ7LBC6 1761 aa18.8■□□□□ 0.6
VARS-228ENST00000495010 ERBB4Q15303 1308 aa18.79■□□□□ 0.6
VARS-228ENST00000495010 NTSR2O95665 410 aa18.79■□□□□ 0.6
VARS-228ENST00000495010 AOC3Q16853 763 aa18.79■□□□□ 0.6
VARS-228ENST00000495010 ABHD8Q96I13 439 aa18.79■□□□□ 0.6
VARS-228ENST00000495010 THUMPD2Q9BTF0 503 aaKnown RBP18.79■□□□□ 0.6
VARS-228ENST00000495010 VPS33BQ9H267 617 aa18.79■□□□□ 0.6
VARS-228ENST00000495010 COL4A5P29400 1685 aa18.79■□□□□ 0.6
VARS-228ENST00000495010 FMR1Q06787 632 aaKnown RBP eCLIP18.78■□□□□ 0.61e-7■■■■■ 31.9
VARS-228ENST00000495010 CYP4F22Q6NT55 531 aa18.78■□□□□ 0.6
VARS-228ENST00000495010 GPR101Q96P66 508 aaPredicted RBP18.78■□□□□ 0.6
VARS-228ENST00000495010 UTP14AQ9BVJ6 771 aaKnown RBP18.78■□□□□ 0.6
VARS-228ENST00000495010 ADARB2Q9NS39 739 aaKnown RBP18.78■□□□□ 0.6
VARS-228ENST00000495010 DLG5Q8TDM6 1919 aa18.78■□□□□ 0.6
VARS-228ENST00000495010 LTBP1Q14766 1721 aa18.77■□□□□ 0.6
VARS-228ENST00000495010 TRAF5O00463 557 aa18.77■□□□□ 0.6
VARS-228ENST00000495010 EIF2S2P20042 333 aaKnown RBP18.77■□□□□ 0.6
VARS-228ENST00000495010 TSPYL4Q9UJ04 414 aa18.77■□□□□ 0.6
VARS-228ENST00000495010 ATP6V0A2Q9Y487 856 aa18.77■□□□□ 0.6
VARS-228ENST00000495010 C3orf67Q6ZVT6 689 aa18.76■□□□□ 0.59
VARS-228ENST00000495010 PLEKHF1Q96S99 279 aa18.76■□□□□ 0.59
VARS-228ENST00000495010 GPRC5DQ9NZD1 345 aa18.76■□□□□ 0.59
VARS-228ENST00000495010 ZNRF3Q9ULT6 936 aa18.76■□□□□ 0.59
VARS-228ENST00000495010 TLL2Q9Y6L7 1015 aa18.76■□□□□ 0.59
VARS-228ENST00000495010 CST9Q5W186 159 aa18.75■□□□□ 0.59
VARS-228ENST00000495010 DPP8Q6V1X1 898 aaPredicted RBP18.75■□□□□ 0.59
VARS-228ENST00000495010 SLC51AQ86UW1 340 aa18.75■□□□□ 0.59
VARS-228ENST00000495010 BCL2L13Q9BXK5 485 aa18.75■□□□□ 0.59
VARS-228ENST00000495010 BBOX1O75936 387 aa18.74■□□□□ 0.59
VARS-228ENST00000495010 SLC10A5Q5PT55 438 aa18.74■□□□□ 0.59
VARS-228ENST00000495010 ABCC4O15439 1325 aa18.74■□□□□ 0.59
VARS-228ENST00000495010 TRPM7Q96QT4 1865 aa18.73■□□□□ 0.59
VARS-228ENST00000495010 CELF2O95319 508 aaKnown RBP18.73■□□□□ 0.59
VARS-228ENST00000495010 MAP2K2P36507 400 aa18.73■□□□□ 0.59
VARS-228ENST00000495010 GMPSP49915 693 aaPredicted RBP18.73■□□□□ 0.59
VARS-228ENST00000495010 CXCL9Q07325 125 aa18.73■□□□□ 0.59
VARS-228ENST00000495010 HSP90AB3PQ58FF7 597 aa18.73■□□□□ 0.59
VARS-228ENST00000495010 CIAPIN1Q6FI81 312 aa18.73■□□□□ 0.59
VARS-228ENST00000495010 MPNDQ8N594 471 aa18.73■□□□□ 0.59
VARS-228ENST00000495010 CCDC85CA6NKD9 419 aa18.72■□□□□ 0.59
VARS-228ENST00000495010 TNIP1Q15025 636 aa18.72■□□□□ 0.59
VARS-228ENST00000495010 DDX46Q7L014 1031 aaKnown RBP18.72■□□□□ 0.59
VARS-228ENST00000495010 SP8Q8IXZ3 490 aa18.72■□□□□ 0.59
VARS-228ENST00000495010 RTFDC1Q9BY42 306 aaPredicted RBP18.72■□□□□ 0.59
VARS-228ENST00000495010 AOC2O75106 756 aa18.71■□□□□ 0.59
VARS-228ENST00000495010 AIMP1Q12904 312 aaKnown RBP18.71■□□□□ 0.59
VARS-228ENST00000495010 ZNF408Q9H9D4 720 aa18.71■□□□□ 0.59
VARS-228ENST00000495010 HCLS1P14317 486 aaPredicted RBP18.7■□□□□ 0.58
VARS-228ENST00000495010 RIPK4P57078 832 aa18.7■□□□□ 0.58
VARS-228ENST00000495010 PDIA6Q15084 440 aa18.7■□□□□ 0.58
VARS-228ENST00000495010 FAM161AQ3B820 660 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms