RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 SAGE1Q9NXZ1 904 aa9.36□□□□□ -0.91
FN1-225ENST00000494446 CEP290O15078 2479 aa9.36□□□□□ -0.91
FN1-225ENST00000494446 CAMTA2O94983 1202 aa9.35□□□□□ -0.91
FN1-225ENST00000494446 ALDH1B1P30837 517 aa9.35□□□□□ -0.91
FN1-225ENST00000494446 KIF23Q02241 960 aaPredicted RBP9.35□□□□□ -0.91
FN1-225ENST00000494446 CDCA8Q53HL2 280 aa9.35□□□□□ -0.91
FN1-225ENST00000494446 TTC5Q8N0Z6 440 aa9.35□□□□□ -0.91
FN1-225ENST00000494446 PSMD1Q99460 953 aa9.35□□□□□ -0.91
FN1-225ENST00000494446 RNF186Q9NXI6 227 aa9.35□□□□□ -0.91
FN1-225ENST00000494446 CUL9Q8IWT3 2517 aa9.34□□□□□ -0.91
FN1-225ENST00000494446 FAM177BA6PVY3 158 aa9.34□□□□□ -0.91
FN1-225ENST00000494446 A1BGP04217 495 aa9.34□□□□□ -0.91
FN1-225ENST00000494446 IL6STP40189 918 aaPredicted RBP9.34□□□□□ -0.91
FN1-225ENST00000494446 DZIP3Q86Y13 1208 aaKnown RBP9.34□□□□□ -0.91
FN1-225ENST00000494446 GPRC5DQ9NZD1 345 aa9.34□□□□□ -0.91
FN1-225ENST00000494446 KLRG2A4D1S0 409 aaPredicted RBP9.33□□□□□ -0.92
FN1-225ENST00000494446 FAM155AB1AL88 458 aaPredicted RBP9.33□□□□□ -0.92
FN1-225ENST00000494446 DLL1O00548 723 aa9.33□□□□□ -0.92
FN1-225ENST00000494446 FXR1P51114 621 aaKnown RBP eCLIP9.33□□□□□ -0.92
FN1-225ENST00000494446 RGMBQ6NW40 437 aa9.33□□□□□ -0.92
FN1-225ENST00000494446 SAMD1Q6SPF0 538 aaPredicted RBP9.33□□□□□ -0.92
FN1-225ENST00000494446 TPTE2Q6XPS3 522 aa9.33□□□□□ -0.92
FN1-225ENST00000494446 NIM1KQ8IY84 436 aa9.33□□□□□ -0.92
FN1-225ENST00000494446 TEX13AQ9BXU3 409 aaPredicted RBP9.33□□□□□ -0.92
FN1-225ENST00000494446 TRIOBPQ9H2D6 2365 aa9.32□□□□□ -0.92
FN1-225ENST00000494446 SIPA1L3O60292 1781 aaPredicted RBP9.32□□□□□ -0.92
FN1-225ENST00000494446 SNED1Q8TER0 1413 aa9.32□□□□□ -0.92
FN1-225ENST00000494446 ZNF157P51786 506 aaPredicted RBP9.32□□□□□ -0.92
FN1-225ENST00000494446 DLK2Q6UY11 383 aa9.32□□□□□ -0.92
FN1-225ENST00000494446 CDC37L1Q7L3B6 337 aa9.32□□□□□ -0.92
FN1-225ENST00000494446 USP48Q86UV5 1035 aa9.32□□□□□ -0.92
FN1-225ENST00000494446 CCDC102AQ96A19 550 aa9.32□□□□□ -0.92
FN1-225ENST00000494446 ZNF496Q96IT1 587 aaPredicted RBP9.32□□□□□ -0.92
FN1-225ENST00000494446 PGAP2Q9UHJ9 254 aa9.32□□□□□ -0.92
FN1-225ENST00000494446 HDAC9Q9UKV0 1011 aa9.32□□□□□ -0.92
FN1-225ENST00000494446 NUP98P52948 1817 aa9.31□□□□□ -0.92
FN1-225ENST00000494446 KIAA0100Q14667 2235 aaKnown RBP9.31□□□□□ -0.92
FN1-225ENST00000494446 TCERG1O14776 1098 aaKnown RBP9.31□□□□□ -0.92
FN1-225ENST00000494446 GTF2E1P29083 439 aaPredicted RBP9.31□□□□□ -0.92
FN1-225ENST00000494446 GMPSP49915 693 aaPredicted RBP9.31□□□□□ -0.92
FN1-225ENST00000494446 PKN2Q16513 984 aaKnown RBP9.31□□□□□ -0.92
FN1-225ENST00000494446 CC2D2BQ6DHV5 1058 aa9.31□□□□□ -0.92
FN1-225ENST00000494446 HEG1Q9ULI3 1381 aa9.31□□□□□ -0.92
FN1-225ENST00000494446 PAPPA2Q9BXP8 1791 aa9.31□□□□□ -0.92
FN1-225ENST00000494446 NPC1L1Q9UHC9 1359 aa9.3□□□□□ -0.92
FN1-225ENST00000494446 PPIP5K2O43314 1243 aa9.3□□□□□ -0.92
FN1-225ENST00000494446 PIP4K2AP48426 406 aaPredicted RBP9.3□□□□□ -0.92
FN1-225ENST00000494446 HIRAP54198 1017 aaPredicted RBP9.3□□□□□ -0.92
FN1-225ENST00000494446 CXCL9Q07325 125 aa9.3□□□□□ -0.92
FN1-225ENST00000494446 C2orf69Q8N8R5 385 aa9.3□□□□□ -0.92
FN1-225ENST00000494446 ZC3H15Q8WU90 426 aaKnown RBP9.3□□□□□ -0.92
FN1-225ENST00000494446 CSRNP1Q96S65 589 aa9.3□□□□□ -0.92
FN1-225ENST00000494446 BCL2L13Q9BXK5 485 aa9.3□□□□□ -0.92
FN1-225ENST00000494446 NIP7Q9Y221 180 aaKnown RBP eCLIP9.3□□□□□ -0.922e-52■□□□□ 11.1
FN1-225ENST00000494446 ZNF652Q9Y2D9 606 aa9.3□□□□□ -0.92
FN1-225ENST00000494446 AOC3Q16853 763 aa9.29□□□□□ -0.92
FN1-225ENST00000494446 CLEC4GQ6UXB4 293 aa9.29□□□□□ -0.92
FN1-225ENST00000494446 SLC51AQ86UW1 340 aa9.29□□□□□ -0.92
FN1-225ENST00000494446 TRPM4Q8TD43 1214 aa9.29□□□□□ -0.92
FN1-225ENST00000494446 GBA2Q9HCG7 927 aaPredicted RBP9.29□□□□□ -0.92
FN1-225ENST00000494446 MKI67P46013 3256 aaKnown RBP9.28□□□□□ -0.92
FN1-225ENST00000494446 RBBP6Q7Z6E9 1792 aaKnown RBP9.28□□□□□ -0.92
FN1-225ENST00000494446 HMOX1P09601 288 aa9.28□□□□□ -0.92
FN1-225ENST00000494446 MTHFSDQ2M296 383 aaKnown RBP9.28□□□□□ -0.92
FN1-225ENST00000494446 GRIPAP1Q4V328 841 aa9.28□□□□□ -0.92
FN1-225ENST00000494446 ZNF790Q6PG37 636 aa9.28□□□□□ -0.92
FN1-225ENST00000494446 RPGRQ92834 1020 aaKnown RBP9.28□□□□□ -0.92
FN1-225ENST00000494446 POLR3GLQ9BT43 218 aa9.28□□□□□ -0.92
FN1-225ENST00000494446 ZNRF3Q9ULT6 936 aa9.28□□□□□ -0.92
FN1-225ENST00000494446 SHTN1A0MZ66 631 aa9.27□□□□□ -0.93
FN1-225ENST00000494446 H7C1D1 291 aa9.27□□□□□ -0.93
FN1-225ENST00000494446 RAD17O75943 681 aa9.27□□□□□ -0.93
FN1-225ENST00000494446 TBC1D8O95759 1140 aa9.27□□□□□ -0.93
FN1-225ENST00000494446 IL13P35225 146 aa9.27□□□□□ -0.93
FN1-225ENST00000494446 TEFQ10587 303 aa9.27□□□□□ -0.93
FN1-225ENST00000494446 FBXO46Q6PJ61 603 aaPredicted RBP9.27□□□□□ -0.93
FN1-225ENST00000494446 SLC17A8Q8NDX2 589 aa9.27□□□□□ -0.93
FN1-225ENST00000494446 ZNF296Q8WUU4 475 aaPredicted RBP9.27□□□□□ -0.93
FN1-225ENST00000494446 FMNL2Q96PY5 1086 aa9.27□□□□□ -0.93
FN1-225ENST00000494446 CNOT7Q9UIV1 285 aaKnown RBP9.27□□□□□ -0.93
FN1-225ENST00000494446 A0A0C4DFX4 3053 aa9.26□□□□□ -0.93
FN1-225ENST00000494446 SZT2Q5T011 3432 aa9.26□□□□□ -0.93
FN1-225ENST00000494446 PPEF1O14829 653 aaPredicted RBP9.26□□□□□ -0.93
FN1-225ENST00000494446 SLC10A3P09131 477 aa9.26□□□□□ -0.93
FN1-225ENST00000494446 TNIP1Q15025 636 aa9.26□□□□□ -0.93
FN1-225ENST00000494446 CRY2Q49AN0 593 aa9.26□□□□□ -0.93
FN1-225ENST00000494446 KRT26Q7Z3Y9 468 aa9.26□□□□□ -0.93
FN1-225ENST00000494446 NUTM1Q86Y26 1132 aa9.26□□□□□ -0.93
FN1-225ENST00000494446 TMX4Q9H1E5 349 aaPredicted RBP9.26□□□□□ -0.93
FN1-225ENST00000494446 COLQQ9Y215 455 aaPredicted RBP9.26□□□□□ -0.93
FN1-225ENST00000494446 CDHR2Q9BYE9 1310 aa9.26□□□□□ -0.93
FN1-225ENST00000494446 TAF1P21675 1872 aa9.25□□□□□ -0.93
FN1-225ENST00000494446 ADM5C9JUS6 153 aa9.25□□□□□ -0.93
FN1-225ENST00000494446 POLA2Q14181 598 aa9.25□□□□□ -0.93
FN1-225ENST00000494446 MORC1Q86VD1 984 aa9.25□□□□□ -0.93
FN1-225ENST00000494446 REM2Q8IYK8 340 aaPredicted RBP9.25□□□□□ -0.93
FN1-225ENST00000494446 RBM17Q96I25 401 aaKnown RBP9.25□□□□□ -0.93
FN1-225ENST00000494446 USP16Q9Y5T5 823 aa9.25□□□□□ -0.93
FN1-225ENST00000494446 ABCC12Q96J65 1359 aa9.24□□□□□ -0.93
FN1-225ENST00000494446 POTEFA5A3E0 1075 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms