RNA–Protein interactions for RNA: ENST00000494262.5

CDKN2A-206, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-206ENST00000494262 OLFM4Q6UX06 510 aa29■■■□□ 2.23
CDKN2A-206ENST00000494262 IFT57Q9NWB7 429 aa29■■■□□ 2.23
CDKN2A-206ENST00000494262 DICER1Q9UPY3 1922 aaKnown RBP29■■■□□ 2.23
CDKN2A-206ENST00000494262 HSP90AB3PQ58FF7 597 aa28.99■■■□□ 2.23
CDKN2A-206ENST00000494262 DUSP27Q5VZP5 1158 aa28.99■■■□□ 2.23
CDKN2A-206ENST00000494262 RPGRQ92834 1020 aaKnown RBP28.99■■■□□ 2.23
CDKN2A-206ENST00000494262 UTP14AQ9BVJ6 771 aaKnown RBP28.99■■■□□ 2.23
CDKN2A-206ENST00000494262 GNAI1P63096 354 aa28.98■■■□□ 2.23
CDKN2A-206ENST00000494262 FKBP4Q02790 459 aaKnown RBP eCLIP28.97■■■□□ 2.23
CDKN2A-206ENST00000494262 DPY19L2Q6NUT2 758 aa28.97■■■□□ 2.23
CDKN2A-206ENST00000494262 DBF4Q9UBU7 674 aaPredicted RBP28.97■■■□□ 2.23
CDKN2A-206ENST00000494262 RTKN2Q8IZC4 609 aa28.96■■■□□ 2.23
CDKN2A-206ENST00000494262 ANKRD36CQ5JPF3 1778 aa28.96■■■□□ 2.23
CDKN2A-206ENST00000494262 ANP32CO43423 234 aa28.95■■■□□ 2.22
CDKN2A-206ENST00000494262 VEGFAP15692 232 aaPredicted RBP28.95■■■□□ 2.22
CDKN2A-206ENST00000494262 HOXA10P31260 410 aaPredicted RBP28.95■■■□□ 2.22
CDKN2A-206ENST00000494262 TCIRG1Q13488 830 aa28.95■■■□□ 2.22
CDKN2A-206ENST00000494262 C3orf67Q6ZVT6 689 aa28.95■■■□□ 2.22
CDKN2A-206ENST00000494262 NLRP10Q86W26 655 aa28.94■■■□□ 2.22
CDKN2A-206ENST00000494262 RBM17Q96I25 401 aaKnown RBP28.94■■■□□ 2.22
CDKN2A-206ENST00000494262 ZNF277Q9NRM2 450 aaPredicted RBP28.94■■■□□ 2.22
CDKN2A-206ENST00000494262 NLRP3Q96P20 1036 aa28.93■■■□□ 2.22
CDKN2A-206ENST00000494262 FSTL1Q12841 308 aa28.92■■■□□ 2.22
CDKN2A-206ENST00000494262 SLC10A5Q5PT55 438 aa28.92■■■□□ 2.22
CDKN2A-206ENST00000494262 PLBD2Q8NHP8 589 aa28.92■■■□□ 2.22
CDKN2A-206ENST00000494262 MRS2Q9HD23 443 aa28.92■■■□□ 2.22
CDKN2A-206ENST00000494262 HYPKQ9NX55 129 aa28.92■■■□□ 2.22
CDKN2A-206ENST00000494262 RNF123Q5XPI4 1314 aa28.92■■■□□ 2.22
CDKN2A-206ENST00000494262 ELL2O00472 640 aaPredicted RBP28.91■■■□□ 2.22
CDKN2A-206ENST00000494262 APLP1P51693 650 aa28.91■■■□□ 2.22
CDKN2A-206ENST00000494262 ANKRD13DQ6ZTN6 518 aa28.91■■■□□ 2.22
CDKN2A-206ENST00000494262 CRAMP1Q96RY5 1269 aa28.91■■■□□ 2.22
CDKN2A-206ENST00000494262 SYNE4Q8N205 404 aa28.9■■■□□ 2.22
CDKN2A-206ENST00000494262 TRMT112Q9UI30 125 aaKnown RBP28.9■■■□□ 2.22
CDKN2A-206ENST00000494262 WDR90Q96KV7 1748 aa28.89■■■□□ 2.22
CDKN2A-206ENST00000494262 POTECB2RU33 542 aa28.88■■■□□ 2.21
CDKN2A-206ENST00000494262 PPEF1O14829 653 aaPredicted RBP28.88■■■□□ 2.21
CDKN2A-206ENST00000494262 DDNO94850 711 aaPredicted RBP28.88■■■□□ 2.21
CDKN2A-206ENST00000494262 HCLS1P14317 486 aaPredicted RBP28.88■■■□□ 2.21
CDKN2A-206ENST00000494262 CC2D2BQ6DHV5 1058 aa28.88■■■□□ 2.21
CDKN2A-206ENST00000494262 SMC1BQ8NDV3 1235 aa28.88■■■□□ 2.21
CDKN2A-206ENST00000494262 ZNF428Q96B54 188 aa28.88■■■□□ 2.21
CDKN2A-206ENST00000494262 TCERG1O14776 1098 aaKnown RBP28.87■■■□□ 2.21
CDKN2A-206ENST00000494262 C8orf58Q8NAV2 365 aa28.87■■■□□ 2.21
CDKN2A-206ENST00000494262 SH3TC1Q8TE82 1336 aa28.87■■■□□ 2.21
CDKN2A-206ENST00000494262 SNED1Q8TER0 1413 aa28.86■■■□□ 2.21
CDKN2A-206ENST00000494262 IARSP41252 1262 aaKnown RBP28.86■■■□□ 2.21
CDKN2A-206ENST00000494262 PSMD1Q99460 953 aa28.86■■■□□ 2.21
CDKN2A-206ENST00000494262 SLC51AQ86UW1 340 aa28.85■■■□□ 2.21
CDKN2A-206ENST00000494262 ATP5J2-PTCD1G3V325 749 aa28.84■■■□□ 2.21
CDKN2A-206ENST00000494262 CCDC27Q2M243 656 aa28.84■■■□□ 2.21
CDKN2A-206ENST00000494262 ISCA1Q9BUE6 129 aa28.84■■■□□ 2.21
CDKN2A-206ENST00000494262 ABCC4O15439 1325 aa28.84■■■□□ 2.21
CDKN2A-206ENST00000494262 GOLGA2Q08379 1002 aa28.83■■■□□ 2.21
CDKN2A-206ENST00000494262 GRIPAP1Q4V328 841 aa28.83■■■□□ 2.21
CDKN2A-206ENST00000494262 TSR2Q969E8 191 aaKnown RBP28.83■■■□□ 2.21
CDKN2A-206ENST00000494262 WWC1Q8IX03 1113 aa28.82■■■□□ 2.2
CDKN2A-206ENST00000494262 PHAXQ9H814 394 aaKnown RBP28.82■■■□□ 2.2
CDKN2A-206ENST00000494262 ZNF541Q9H0D2 1346 aa28.82■■■□□ 2.2
CDKN2A-206ENST00000494262 LAMB2P55268 1798 aa28.81■■■□□ 2.2
CDKN2A-206ENST00000494262 RIC3Q7Z5B4 369 aa28.81■■■□□ 2.2
CDKN2A-206ENST00000494262 TMX4Q9H1E5 349 aaPredicted RBP28.81■■■□□ 2.2
CDKN2A-206ENST00000494262 CCDC30Q5VVM6 783 aa28.8■■■□□ 2.2
CDKN2A-206ENST00000494262 TSPYL6Q8N831 410 aa28.8■■■□□ 2.2
CDKN2A-206ENST00000494262 CHMP4AQ9BY43 222 aa28.8■■■□□ 2.2
CDKN2A-206ENST00000494262 ATP6V0A2Q9Y487 856 aa28.8■■■□□ 2.2
CDKN2A-206ENST00000494262 DDX46Q7L014 1031 aaKnown RBP28.79■■■□□ 2.2
CDKN2A-206ENST00000494262 JDP2Q8WYK2 163 aa28.79■■■□□ 2.2
CDKN2A-206ENST00000494262 FAM89AQ96GI7 184 aa28.79■■■□□ 2.2
CDKN2A-206ENST00000494262 L3MBTL3Q96JM7 780 aaPredicted RBP28.78■■■□□ 2.2
CDKN2A-206ENST00000494262 IQCA1LA6NCM1 817 aa28.77■■■□□ 2.2
CDKN2A-206ENST00000494262 FZD9O00144 591 aa28.77■■■□□ 2.2
CDKN2A-206ENST00000494262 BBOX1O75936 387 aa28.77■■■□□ 2.2
CDKN2A-206ENST00000494262 HTRA3P83110 453 aa28.77■■■□□ 2.2
CDKN2A-206ENST00000494262 TRIM28Q13263 835 aaKnown RBP28.77■■■□□ 2.2
CDKN2A-206ENST00000494262 RTL5Q5HYW3 569 aaPredicted RBP28.76■■■□□ 2.19
CDKN2A-206ENST00000494262 DDX60Q8IY21 1712 aaKnown RBP28.75■■■□□ 2.19
CDKN2A-206ENST00000494262 GRAPQ13588 217 aa28.75■■■□□ 2.19
CDKN2A-206ENST00000494262 NCBP3Q53F19 620 aaKnown RBP28.75■■■□□ 2.19
CDKN2A-206ENST00000494262 LARGE2Q8N3Y3 721 aa28.75■■■□□ 2.19
CDKN2A-206ENST00000494262 GRAPLQ8TC17 118 aaPredicted RBP28.75■■■□□ 2.19
CDKN2A-206ENST00000494262 MYD88Q99836 296 aa28.75■■■□□ 2.19
CDKN2A-206ENST00000494262 SALL2Q9Y467 1007 aaPredicted RBP28.75■■■□□ 2.19
CDKN2A-206ENST00000494262 IL16Q14005 1332 aa28.74■■■□□ 2.19
CDKN2A-206ENST00000494262 COL4A5P29400 1685 aa28.74■■■□□ 2.19
CDKN2A-206ENST00000494262 DNAJC5GQ8N7S2 189 aa28.74■■■□□ 2.19
CDKN2A-206ENST00000494262 DDX58O95786 925 aaKnown RBP28.73■■■□□ 2.19
CDKN2A-206ENST00000494262 SP8Q8IXZ3 490 aa28.73■■■□□ 2.19
CDKN2A-206ENST00000494262 SCN4AP35499 1836 aa28.72■■■□□ 2.19
CDKN2A-206ENST00000494262 POTEIP0CG38 1075 aa28.72■■■□□ 2.19
CDKN2A-206ENST00000494262 POTEJP0CG39 1038 aa28.72■■■□□ 2.19
CDKN2A-206ENST00000494262 EIF6P56537 245 aaKnown RBP28.72■■■□□ 2.19
CDKN2A-206ENST00000494262 TAF1DQ9H5J8 278 aaPredicted RBP28.72■■■□□ 2.19
CDKN2A-206ENST00000494262 IRS4O14654 1257 aaPredicted RBP28.71■■■□□ 2.19
CDKN2A-206ENST00000494262 PPIP5K2O43314 1243 aa28.71■■■□□ 2.19
CDKN2A-206ENST00000494262 TWISTNBQ3B726 338 aaPredicted RBP28.71■■■□□ 2.19
CDKN2A-206ENST00000494262 CHADLQ6NUI6 762 aa28.71■■■□□ 2.19
CDKN2A-206ENST00000494262 DPP8Q6V1X1 898 aaPredicted RBP28.71■■■□□ 2.19
CDKN2A-206ENST00000494262 GPC2Q8N158 579 aa28.71■■■□□ 2.19
CDKN2A-206ENST00000494262 STK31Q9BXU1 1019 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms