RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-222ENST00000494012 A0A0G2JLW4 131 aa12.74□□□□□ -0.37
MACF1-222ENST00000494012 H0YIN7 160 aa12.74□□□□□ -0.37
MACF1-222ENST00000494012 DPEP1P16444 411 aa12.74□□□□□ -0.37
MACF1-222ENST00000494012 TRIM28Q13263 835 aaKnown RBP12.74□□□□□ -0.37
MACF1-222ENST00000494012 GPR162Q16538 588 aa12.74□□□□□ -0.37
MACF1-222ENST00000494012 C2CD5Q86YS7 1000 aa12.74□□□□□ -0.37
MACF1-222ENST00000494012 PELP1Q8IZL8 1130 aaKnown RBP12.74□□□□□ -0.37
MACF1-222ENST00000494012 ISCA1Q9BUE6 129 aa12.74□□□□□ -0.37
MACF1-222ENST00000494012 ABCC12Q96J65 1359 aa12.73□□□□□ -0.37
MACF1-222ENST00000494012 PTPRCP08575 1304 aa12.73□□□□□ -0.37
MACF1-222ENST00000494012 SH3TC1Q8TE82 1336 aa12.73□□□□□ -0.37
MACF1-222ENST00000494012 ATP5J2-PTCD1G3V325 749 aa12.73□□□□□ -0.37
MACF1-222ENST00000494012 CHRNA5P30532 468 aa12.73□□□□□ -0.37
MACF1-222ENST00000494012 NUTM1Q86Y26 1132 aa12.73□□□□□ -0.37
MACF1-222ENST00000494012 CCDC24Q8N4L8 307 aa12.73□□□□□ -0.37
MACF1-222ENST00000494012 CCDC191Q8NCU4 936 aa12.73□□□□□ -0.37
MACF1-222ENST00000494012 MYD88Q99836 296 aa12.73□□□□□ -0.37
MACF1-222ENST00000494012 SMC4Q9NTJ3 1288 aa12.73□□□□□ -0.37
MACF1-222ENST00000494012 PIM2Q9P1W9 311 aa12.73□□□□□ -0.37
MACF1-222ENST00000494012 TRMT112Q9UI30 125 aaKnown RBP12.73□□□□□ -0.37
MACF1-222ENST00000494012 HSP90B1P14625 803 aaKnown RBP12.72□□□□□ -0.37
MACF1-222ENST00000494012 ERFEQ4G0M1 354 aa12.72□□□□□ -0.37
MACF1-222ENST00000494012 MRPL50Q8N5N7 158 aaKnown RBP12.72□□□□□ -0.37
MACF1-222ENST00000494012 DNAAF4Q8WXU2 420 aa12.72□□□□□ -0.37
MACF1-222ENST00000494012 SSH1Q8WYL5 1049 aa12.72□□□□□ -0.37
MACF1-222ENST00000494012 CWC25Q9NXE8 425 aaPredicted RBP12.72□□□□□ -0.37
MACF1-222ENST00000494012 MYH3P11055 1940 aa12.72□□□□□ -0.37
MACF1-222ENST00000494012 CHD4Q14839 1912 aa12.71□□□□□ -0.37
MACF1-222ENST00000494012 KLRG2A4D1S0 409 aaPredicted RBP12.71□□□□□ -0.37
MACF1-222ENST00000494012 GRIN3BO60391 1043 aa12.71□□□□□ -0.37
MACF1-222ENST00000494012 SRGNP10124 158 aa12.71□□□□□ -0.37
MACF1-222ENST00000494012 DALRD3Q5D0E6 543 aaKnown RBP12.71□□□□□ -0.37
MACF1-222ENST00000494012 STYK1Q6J9G0 422 aa12.71□□□□□ -0.37
MACF1-222ENST00000494012 BCL2L13Q9BXK5 485 aa12.71□□□□□ -0.37
MACF1-222ENST00000494012 KIF16BQ96L93 1317 aa12.7□□□□□ -0.38
MACF1-222ENST00000494012 NPR1P16066 1061 aa12.7□□□□□ -0.38
MACF1-222ENST00000494012 KCNA3P22001 575 aa12.7□□□□□ -0.38
MACF1-222ENST00000494012 CRY2Q49AN0 593 aa12.7□□□□□ -0.38
MACF1-222ENST00000494012 SLC10A5Q5PT55 438 aa12.7□□□□□ -0.38
MACF1-222ENST00000494012 ZBTB38Q8NAP3 1195 aaPredicted RBP12.7□□□□□ -0.38
MACF1-222ENST00000494012 LINS1Q8NG48 757 aa12.7□□□□□ -0.38
MACF1-222ENST00000494012 MASTLQ96GX5 879 aa12.7□□□□□ -0.38
MACF1-222ENST00000494012 BCS1LQ9Y276 419 aa12.7□□□□□ -0.38
MACF1-222ENST00000494012 NEURL1BA8MQ27 555 aa12.69□□□□□ -0.38
MACF1-222ENST00000494012 PCCAP05165 728 aaPredicted RBP12.69□□□□□ -0.38
MACF1-222ENST00000494012 YBX3P16989 372 aaKnown RBP eCLIP12.69□□□□□ -0.38
MACF1-222ENST00000494012 RARSP54136 660 aaKnown RBP12.69□□□□□ -0.38
MACF1-222ENST00000494012 BRPF1P55201 1214 aaPredicted RBP12.69□□□□□ -0.38
MACF1-222ENST00000494012 TTLL6Q8N841 843 aa12.69□□□□□ -0.38
MACF1-222ENST00000494012 RPGRQ92834 1020 aaKnown RBP12.69□□□□□ -0.38
MACF1-222ENST00000494012 CNKSR1Q969H4 720 aa12.69□□□□□ -0.38
MACF1-222ENST00000494012 ZNF622Q969S3 477 aaKnown RBP eCLIP12.69□□□□□ -0.381e-10■□□□□ 9.3
MACF1-222ENST00000494012 NLRP3Q96P20 1036 aa12.69□□□□□ -0.38
MACF1-222ENST00000494012 WWC3Q9ULE0 1092 aa12.69□□□□□ -0.38
MACF1-222ENST00000494012 F6X3S4 739 aa12.68□□□□□ -0.38
MACF1-222ENST00000494012 IGKV5-2P06315 115 aa12.68□□□□□ -0.38
MACF1-222ENST00000494012 CWF19L2Q2TBE0 894 aaKnown RBP12.68□□□□□ -0.38
MACF1-222ENST00000494012 ZNF784Q8NCA9 323 aaPredicted RBP12.68□□□□□ -0.38
MACF1-222ENST00000494012 FAM89AQ96GI7 184 aa12.68□□□□□ -0.38
MACF1-222ENST00000494012 UTRNP46939 3433 aa12.68□□□□□ -0.38
MACF1-222ENST00000494012 SLX4Q8IY92 1834 aa12.67□□□□□ -0.38
MACF1-222ENST00000494012 CDHR2Q9BYE9 1310 aa12.67□□□□□ -0.38
MACF1-222ENST00000494012 HCLS1P14317 486 aaPredicted RBP12.67□□□□□ -0.38
MACF1-222ENST00000494012 ALDH1B1P30837 517 aa12.67□□□□□ -0.38
MACF1-222ENST00000494012 SLC4A10Q6U841 1118 aa12.67□□□□□ -0.38
MACF1-222ENST00000494012 RBM17Q96I25 401 aaKnown RBP12.67□□□□□ -0.38
MACF1-222ENST00000494012 GOLGB1Q14789 3259 aaKnown RBP12.67□□□□□ -0.38
MACF1-222ENST00000494012 IRS4O14654 1257 aaPredicted RBP12.66□□□□□ -0.38
MACF1-222ENST00000494012 IPO8O15397 1037 aaKnown RBP12.66□□□□□ -0.38
MACF1-222ENST00000494012 ALDH1L1O75891 902 aa12.66□□□□□ -0.38
MACF1-222ENST00000494012 HOXA10P31260 410 aaPredicted RBP12.66□□□□□ -0.38
MACF1-222ENST00000494012 GCKRQ14397 625 aa12.66□□□□□ -0.38
MACF1-222ENST00000494012 RTL5Q5HYW3 569 aaPredicted RBP12.66□□□□□ -0.38
MACF1-222ENST00000494012 BEND3Q5T5X7 828 aa12.66□□□□□ -0.38
MACF1-222ENST00000494012 SOGA3Q5TF21 947 aa12.66□□□□□ -0.38
MACF1-222ENST00000494012 PRPF40BQ6NWY9 871 aaKnown RBP12.66□□□□□ -0.38
MACF1-222ENST00000494012 API5Q9BZZ5 524 aaKnown RBP12.66□□□□□ -0.38
MACF1-222ENST00000494012 SRCIN1Q9C0H9 1055 aa12.66□□□□□ -0.38
MACF1-222ENST00000494012 FER1L6Q2WGJ9 1857 aa12.65□□□□□ -0.38
MACF1-222ENST00000494012 UBE3BQ7Z3V4 1068 aa12.65□□□□□ -0.38
MACF1-222ENST00000494012 SYNE4Q8N205 404 aa12.65□□□□□ -0.38
MACF1-222ENST00000494012 ARHGAP45Q92619 1136 aa12.65□□□□□ -0.38
MACF1-222ENST00000494012 CRAMP1Q96RY5 1269 aa12.65□□□□□ -0.38
MACF1-222ENST00000494012 NOB1Q9ULX3 412 aaKnown RBP12.65□□□□□ -0.38
MACF1-222ENST00000494012 H7C1W4 665 aa12.64□□□□□ -0.39
MACF1-222ENST00000494012 PDE8AO60658 829 aa12.64□□□□□ -0.39
MACF1-222ENST00000494012 C3orf67Q6ZVT6 689 aa12.64□□□□□ -0.39
MACF1-222ENST00000494012 DDX46Q7L014 1031 aaKnown RBP12.64□□□□□ -0.39
MACF1-222ENST00000494012 YTHDC1Q96MU7 727 aaKnown RBP12.64□□□□□ -0.39
MACF1-222ENST00000494012 LRRC37AA6NMS7 1700 aa12.63□□□□□ -0.39
MACF1-222ENST00000494012 GRM8O00222 908 aa12.63□□□□□ -0.39
MACF1-222ENST00000494012 CCT4P50991 539 aaKnown RBP12.63□□□□□ -0.39
MACF1-222ENST00000494012 SF3B3Q15393 1217 aaKnown RBP12.63□□□□□ -0.39
MACF1-222ENST00000494012 CCDC152Q4G0S7 254 aa12.63□□□□□ -0.39
MACF1-222ENST00000494012 C9orf78Q9NZ63 289 aaPredicted RBP12.63□□□□□ -0.39
MACF1-222ENST00000494012 TAF1P21675 1872 aa12.63□□□□□ -0.39
MACF1-222ENST00000494012 SBF1O95248 1867 aa12.62□□□□□ -0.39
MACF1-222ENST00000494012 C21orf2O43822 256 aa12.62□□□□□ -0.39
MACF1-222ENST00000494012 BCAR3O75815 825 aa12.62□□□□□ -0.39
MACF1-222ENST00000494012 CTSWP56202 376 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms