RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-222	ENST00000493792	COPS6	Q7L5N1	327 aa		13.43	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	XAGE3	Q8WTP9	111 aa		13.43	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.43	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	PDZRN3	Q9UPQ7	1066 aa		13.43	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	AFDN	P55196	1824 aa	Known RBP	13.42	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	GPT	P24298	496 aa		13.42	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	GTF2E1	P29083	439 aa	Predicted RBP	13.42	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	PDE6B	P35913	854 aa		13.42	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	PRR5L	Q6MZQ0	368 aa		13.42	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.42	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	CNBD1	Q8NA66	436 aa		13.42	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.42	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	MYH16	Q9H6N6	1097 aa		13.42	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	DBF4	Q9UBU7	674 aa	Predicted RBP	13.42	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	FANCI	Q9NVI1	1328 aa		13.41	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	TMEM88B	A6NKF7	163 aa		13.41	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	ERVV-1	B6SEH8	477 aa		13.41	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	TCERG1	O14776	1098 aa	Known RBP	13.41	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	RGL2	O15211	777 aa		13.41	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	ST5	P78524	1137 aa		13.41	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	GOLGA2	Q08379	1002 aa		13.41	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	TWISTNB	Q3B726	338 aa	Predicted RBP	13.41	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	CCDC30	Q5VVM6	783 aa		13.41	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	LDHD	Q86WU2	507 aa		13.41	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	TSPYL6	Q8N831	410 aa		13.41	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	C7orf43	Q8WVR3	580 aa		13.41	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	ABHD8	Q96I13	439 aa		13.41	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.41	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	CHMP4A	Q9BY43	222 aa		13.41	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	TAOK3	Q9H2K8	898 aa		13.41	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	STK31	Q9BXU1	1019 aa		13.4	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	HYPK	Q9NX55	129 aa		13.4	□□□□□ -0.26
TRAPPC12-222	ENST00000493792	SRGN	P10124	158 aa		13.39	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	HSPA8	P11142	646 aa	Known RBP	13.39	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	EXOSC9	Q06265	439 aa	Known RBP	13.39	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	FAM161A	Q3B820	660 aa		13.39	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	TPTE2	Q6XPS3	522 aa		13.39	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.39	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	LRP10	Q7Z4F1	713 aa		13.39	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	NUP98	P52948	1817 aa		13.39	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	IQCA1L	A6NCM1	817 aa		13.38	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	RASSF10	A6NK89	507 aa		13.38	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	RGS19	P49795	217 aa		13.38	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	STYK1	Q6J9G0	422 aa		13.38	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	CNKSR1	Q969H4	720 aa		13.38	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	AIDA	Q96BJ3	306 aa		13.38	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.38	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	DEFB115	Q30KQ5	88 aa		13.37	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	HSP90AB3P	Q58FF7	597 aa		13.37	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	PRPF40B	Q6NWY9	871 aa	Known RBP	13.37	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	RIC3	Q7Z5B4	369 aa		13.37	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	NYX	Q9GZU5	481 aa		13.37	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	PHAX	Q9H814	394 aa	Known RBP	13.37	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	DLEC1	Q9Y238	1755 aa		13.36	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	KLRG2	A4D1S0	409 aa	Predicted RBP	13.36	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	SUSD4	Q5VX71	490 aa		13.36	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	ANKRD13D	Q6ZTN6	518 aa		13.36	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	PPP1R42	Q7Z4L9	355 aa		13.36	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	NUTM1	Q86Y26	1132 aa		13.36	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	PLBD2	Q8NHP8	589 aa		13.36	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	ZNF428	Q96B54	188 aa		13.36	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	CCDC88A	Q3V6T2	1871 aa		13.36	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	SLC4A2	P04920	1241 aa		13.35	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	PARP10	Q53GL7	1025 aa		13.35	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	ZNF34	Q8IZ26	560 aa		13.35	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	CNTROB	Q8N137	903 aa		13.35	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	MASTL	Q96GX5	879 aa		13.35	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	UBN2	Q6ZU65	1347 aa		13.35	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	ZNF521	Q96K83	1311 aa		13.35	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	WDR33	Q9C0J8	1336 aa	Known RBP	13.35	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	ANKRD31	Q8N7Z5	1873 aa		13.34	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	TIAM2	Q8IVF5	1701 aa		13.34	□□□□□ -0.27
TRAPPC12-222	ENST00000493792		E9PSI1	815 aa		13.34	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	DDX58	O95786	925 aa	Known RBP	13.34	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	MAP2K1	Q02750	393 aa	Predicted RBP	13.34	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	TCIRG1	Q13488	830 aa		13.34	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	SOGA3	Q5TF21	947 aa		13.34	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	MAP1S	Q66K74	1059 aa	Predicted RBP	13.34	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	UTP14A	Q9BVJ6	771 aa	Known RBP	13.34	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	PCDH10	Q9P2E7	1040 aa		13.34	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	ZNF541	Q9H0D2	1346 aa		13.34	□□□□□ -0.27
TRAPPC12-222	ENST00000493792	ATP5J2-PTCD1	G3V325	749 aa		13.33	□□□□□ -0.28
TRAPPC12-222	ENST00000493792	VAMP4	O75379	141 aa		13.33	□□□□□ -0.28
TRAPPC12-222	ENST00000493792	EPHX2	P34913	555 aa		13.33	□□□□□ -0.28
TRAPPC12-222	ENST00000493792	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
TRAPPC12-222	ENST00000493792	EAPP	Q56P03	285 aa	Predicted RBP	13.33	□□□□□ -0.28
TRAPPC12-222	ENST00000493792	OLFM4	Q6UX06	510 aa		13.33	□□□□□ -0.28
TRAPPC12-222	ENST00000493792	HACL1	Q9UJ83	578 aa		13.33	□□□□□ -0.28
TRAPPC12-222	ENST00000493792	FER1L6	Q2WGJ9	1857 aa		13.33	□□□□□ -0.28
TRAPPC12-222	ENST00000493792	ANKRD36C	Q5JPF3	1778 aa		13.32	□□□□□ -0.28
TRAPPC12-222	ENST00000493792	FZD9	O00144	591 aa		13.32	□□□□□ -0.28
TRAPPC12-222	ENST00000493792	NTSR2	O95665	410 aa		13.32	□□□□□ -0.28
TRAPPC12-222	ENST00000493792	NPR1	P16066	1061 aa		13.32	□□□□□ -0.28
TRAPPC12-222	ENST00000493792	MLLT1	Q03111	559 aa	Predicted RBP	13.32	□□□□□ -0.28
TRAPPC12-222	ENST00000493792	NLRP10	Q86W26	655 aa		13.32	□□□□□ -0.28
TRAPPC12-222	ENST00000493792	CDCA7L	Q96GN5	454 aa		13.32	□□□□□ -0.28
TRAPPC12-222	ENST00000493792	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.32	□□□□□ -0.28
TRAPPC12-222	ENST00000493792	TRMT112	Q9UI30	125 aa	Known RBP	13.32	□□□□□ -0.28
TRAPPC12-222	ENST00000493792	CLEC11A	Q9Y240	323 aa		13.32	□□□□□ -0.28

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