RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 TAF1LQ8IZX4 1826 aa15.71■□□□□ 0.1
SNX17-208ENST00000493711 PLIN1O60240 522 aa15.7■□□□□ 0.1
SNX17-208ENST00000493711 BEND3Q5T5X7 828 aa15.7■□□□□ 0.1
SNX17-208ENST00000493711 AMIGO3Q86WK7 504 aa15.7■□□□□ 0.1
SNX17-208ENST00000493711 CCDC191Q8NCU4 936 aa15.7■□□□□ 0.1
SNX17-208ENST00000493711 MYD88Q99836 296 aa15.7■□□□□ 0.1
SNX17-208ENST00000493711 SPON1Q9HCB6 807 aa15.7■□□□□ 0.1
SNX17-208ENST00000493711 UTRNP46939 3433 aa15.7■□□□□ 0.1
SNX17-208ENST00000493711 NEFLP07196 543 aa15.69■□□□□ 0.1
SNX17-208ENST00000493711 GYS1P13807 737 aa15.69■□□□□ 0.1
SNX17-208ENST00000493711 HLFQ16534 295 aa15.69■□□□□ 0.1
SNX17-208ENST00000493711 ZNF34Q8IZ26 560 aa15.69■□□□□ 0.1
SNX17-208ENST00000493711 CLUAP1Q96AJ1 413 aa15.69■□□□□ 0.1
SNX17-208ENST00000493711 ISCA1Q9BUE6 129 aa15.69■□□□□ 0.1
SNX17-208ENST00000493711 SRP68Q9UHB9 627 aaKnown RBP15.69■□□□□ 0.1
SNX17-208ENST00000493711 NUP188Q5SRE5 1749 aa15.68■□□□□ 0.1
SNX17-208ENST00000493711 HSP90B1P14625 803 aaKnown RBP15.68■□□□□ 0.1
SNX17-208ENST00000493711 AAMPQ13685 434 aa15.68■□□□□ 0.1
SNX17-208ENST00000493711 PPP1R42Q7Z4L9 355 aa15.68■□□□□ 0.1
SNX17-208ENST00000493711 SP7Q8TDD2 431 aaPredicted RBP15.68■□□□□ 0.1
SNX17-208ENST00000493711 SETDB2Q96T68 719 aa15.68■□□□□ 0.1
SNX17-208ENST00000493711 CWC25Q9NXE8 425 aaPredicted RBP15.68■□□□□ 0.1
SNX17-208ENST00000493711 DDX19BQ9UMR2 479 aa15.68■□□□□ 0.1
SNX17-208ENST00000493711 NIP7Q9Y221 180 aaKnown RBP eCLIP15.68■□□□□ 0.1
SNX17-208ENST00000493711 NEURL1BA8MQ27 555 aa15.67■□□□□ 0.1
SNX17-208ENST00000493711 MVPQ14764 893 aaKnown RBP15.67■□□□□ 0.1
SNX17-208ENST00000493711 SMIM5Q71RC9 77 aa15.67■□□□□ 0.1
SNX17-208ENST00000493711 ITPRIPQ8IWB1 547 aa15.67■□□□□ 0.1
SNX17-208ENST00000493711 NYXQ9GZU5 481 aa15.67■□□□□ 0.1
SNX17-208ENST00000493711 BCL2L12Q9HB09 334 aa15.67■□□□□ 0.1
SNX17-208ENST00000493711 CACNA1FO60840 1977 aa15.66■□□□□ 0.1
SNX17-208ENST00000493711 MYH14Q7Z406 1995 aaKnown RBP15.66■□□□□ 0.1
SNX17-208ENST00000493711 IGKV5-2P06315 115 aa15.66■□□□□ 0.1
SNX17-208ENST00000493711 GNAI3P08754 354 aa15.66■□□□□ 0.1
SNX17-208ENST00000493711 GCKRQ14397 625 aa15.66■□□□□ 0.1
SNX17-208ENST00000493711 TMEM57Q8N5G2 664 aa15.66■□□□□ 0.1
SNX17-208ENST00000493711 PANK1Q8TE04 598 aa15.66■□□□□ 0.1
SNX17-208ENST00000493711 FARP1Q9Y4F1 1045 aaPredicted RBP15.66■□□□□ 0.1
SNX17-208ENST00000493711 RLBP1P12271 317 aa15.65■□□□□ 0.1
SNX17-208ENST00000493711 NLRP10Q86W26 655 aa15.65■□□□□ 0.1
SNX17-208ENST00000493711 C9orf78Q9NZ63 289 aaPredicted RBP15.65■□□□□ 0.1
SNX17-208ENST00000493711 CARMIL3Q8ND23 1372 aa15.64■□□□□ 0.09
SNX17-208ENST00000493711 ATP5J2-PTCD1G3V325 749 aa15.64■□□□□ 0.09
SNX17-208ENST00000493711 GPTP24298 496 aa15.64■□□□□ 0.09
SNX17-208ENST00000493711 TM4SF1P30408 202 aa15.64■□□□□ 0.09
SNX17-208ENST00000493711 CWF19L2Q2TBE0 894 aaKnown RBP15.64■□□□□ 0.09
SNX17-208ENST00000493711 TBC1D9BQ66K14 1250 aa15.64■□□□□ 0.09
SNX17-208ENST00000493711 TPTE2Q6XPS3 522 aa15.64■□□□□ 0.09
SNX17-208ENST00000493711 UBR3Q6ZT12 1888 aa15.64■□□□□ 0.09
SNX17-208ENST00000493711 ZNF784Q8NCA9 323 aaPredicted RBP15.64■□□□□ 0.09
SNX17-208ENST00000493711 UTP14AQ9BVJ6 771 aaKnown RBP15.64■□□□□ 0.09
SNX17-208ENST00000493711 TNNQ9UQP3 1299 aa15.64■□□□□ 0.09
SNX17-208ENST00000493711 C19orf67A6NJJ6 358 aa15.63■□□□□ 0.09
SNX17-208ENST00000493711 GRM8O00222 908 aa15.63■□□□□ 0.09
SNX17-208ENST00000493711 PCCAP05165 728 aaPredicted RBP15.63■□□□□ 0.09
SNX17-208ENST00000493711 NFIXQ14938 502 aa15.63■□□□□ 0.09
SNX17-208ENST00000493711 C20orf194Q5TEA3 1177 aa15.63■□□□□ 0.09
SNX17-208ENST00000493711 IFFO2Q5TF58 517 aa15.63■□□□□ 0.09
SNX17-208ENST00000493711 ZBTB38Q8NAP3 1195 aaPredicted RBP15.63■□□□□ 0.09
SNX17-208ENST00000493711 MTFR1LQ9H019 292 aa15.63■□□□□ 0.09
SNX17-208ENST00000493711 TRMT112Q9UI30 125 aaKnown RBP15.63■□□□□ 0.09
SNX17-208ENST00000493711 COG6Q9Y2V7 657 aa15.63■□□□□ 0.09
SNX17-208ENST00000493711 UTYO14607 1347 aa15.63■□□□□ 0.09
SNX17-208ENST00000493711 H7C1W4 665 aa15.62■□□□□ 0.09
SNX17-208ENST00000493711 BICDL1Q6ZP65 573 aa15.62■□□□□ 0.09
SNX17-208ENST00000493711 NBPF5PQ86XG9 351 aaPredicted RBP15.62■□□□□ 0.09
SNX17-208ENST00000493711 PARP3Q9Y6F1 533 aa15.62■□□□□ 0.09
SNX17-208ENST00000493711 UBN2Q6ZU65 1347 aa15.62■□□□□ 0.09
SNX17-208ENST00000493711 SCN7AQ01118 1682 aa15.61■□□□□ 0.09
SNX17-208ENST00000493711 QSER1Q2KHR3 1735 aa15.61■□□□□ 0.09
SNX17-208ENST00000493711 ZBTB7BO15156 539 aaPredicted RBP15.61■□□□□ 0.09
SNX17-208ENST00000493711 NPHP1O15259 732 aa15.61■□□□□ 0.09
SNX17-208ENST00000493711 UBTFL1P0CB47 393 aaPredicted RBP15.61■□□□□ 0.09
SNX17-208ENST00000493711 GTF2E1P29083 439 aaPredicted RBP15.61■□□□□ 0.09
SNX17-208ENST00000493711 SUSD4Q5VX71 490 aa15.61■□□□□ 0.09
SNX17-208ENST00000493711 ERICH6BQ5W0A0 696 aa15.61■□□□□ 0.09
SNX17-208ENST00000493711 USP44Q9H0E7 712 aa15.61■□□□□ 0.09
SNX17-208ENST00000493711 SH3TC1Q8TE82 1336 aa15.61■□□□□ 0.09
SNX17-208ENST00000493711 NTSR2O95665 410 aa15.6■□□□□ 0.09
SNX17-208ENST00000493711 SERPINB2P05120 415 aa15.6■□□□□ 0.09
SNX17-208ENST00000493711 MMP10P09238 476 aa15.6■□□□□ 0.09
SNX17-208ENST00000493711 POLD1P28340 1107 aa15.6■□□□□ 0.09
SNX17-208ENST00000493711 CDHR2Q9BYE9 1310 aa15.6■□□□□ 0.09
SNX17-208ENST00000493711 POLRMTO00411 1230 aaKnown RBP15.59■□□□□ 0.09
SNX17-208ENST00000493711 ST5P78524 1137 aa15.59■□□□□ 0.09
SNX17-208ENST00000493711 CNBD1Q8NA66 436 aa15.59■□□□□ 0.09
SNX17-208ENST00000493711 CRBNQ96SW2 442 aa15.59■□□□□ 0.09
SNX17-208ENST00000493711 BCORQ6W2J9 1755 aa15.58■□□□□ 0.08
SNX17-208ENST00000493711 GNAI2P04899 355 aa15.58■□□□□ 0.08
SNX17-208ENST00000493711 SLC10A5Q5PT55 438 aa15.58■□□□□ 0.08
SNX17-208ENST00000493711 UBE3BQ7Z3V4 1068 aa15.58■□□□□ 0.08
SNX17-208ENST00000493711 ZBTB40Q9NUA8 1239 aa15.58■□□□□ 0.08
SNX17-208ENST00000493711 IRS4O14654 1257 aaPredicted RBP15.57■□□□□ 0.08
SNX17-208ENST00000493711 NBPF7P0C2Y1 421 aaPredicted RBP15.57■□□□□ 0.08
SNX17-208ENST00000493711 C1QTNF8P60827 252 aa15.57■□□□□ 0.08
SNX17-208ENST00000493711 DDR1Q08345 913 aa15.57■□□□□ 0.08
SNX17-208ENST00000493711 MSL1Q68DK7 614 aa15.57■□□□□ 0.08
SNX17-208ENST00000493711 FAM89AQ96GI7 184 aa15.57■□□□□ 0.08
SNX17-208ENST00000493711 MEIS3Q99687 375 aa15.57■□□□□ 0.08
SNX17-208ENST00000493711 PLA2G12BQ9BX93 195 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms