RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ZMYM1Q5SVZ6 1142 aa9.57□□□□□ -0.88
SMC4-223ENST00000493695 BTLAQ7Z6A9 289 aa9.57□□□□□ -0.88
SMC4-223ENST00000493695 NUDT8Q8WV74 236 aa9.57□□□□□ -0.88
SMC4-223ENST00000493695 GLMNQ92990 594 aa9.57□□□□□ -0.88
SMC4-223ENST00000493695 JPH1Q9HDC5 661 aaPredicted RBP9.57□□□□□ -0.88
SMC4-223ENST00000493695 SCO2A0A1W2PP80 73 aa9.56□□□□□ -0.88
SMC4-223ENST00000493695 C21orf2O43822 256 aa9.55□□□□□ -0.88
SMC4-223ENST00000493695 MDFIQ99750 246 aa9.55□□□□□ -0.88
SMC4-223ENST00000493695 TPSG1Q9NRR2 321 aa9.55□□□□□ -0.88
SMC4-223ENST00000493695 KCNQ4P56696 695 aa9.54□□□□□ -0.88
SMC4-223ENST00000493695 GAS2L2Q8NHY3 880 aa9.54□□□□□ -0.88
SMC4-223ENST00000493695 C2orf49Q9BVC5 232 aaPredicted RBP9.54□□□□□ -0.88
SMC4-223ENST00000493695 NID1P14543 1247 aa9.53□□□□□ -0.88
SMC4-223ENST00000493695 PROSER2Q86WR7 435 aaPredicted RBP9.53□□□□□ -0.88
SMC4-223ENST00000493695 CALR3Q96L12 384 aaKnown RBP9.53□□□□□ -0.88
SMC4-223ENST00000493695 PRDM6Q9NQX0 595 aa9.53□□□□□ -0.88
SMC4-223ENST00000493695 SLC6A14Q9UN76 642 aa9.53□□□□□ -0.88
SMC4-223ENST00000493695 RAC1P63000 192 aa9.52□□□□□ -0.89
SMC4-223ENST00000493695 MAFBQ9Y5Q3 323 aaPredicted RBP9.52□□□□□ -0.89
SMC4-223ENST00000493695 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.52□□□□□ -0.89
SMC4-223ENST00000493695 NFKB1P19838 968 aa9.51□□□□□ -0.89
SMC4-223ENST00000493695 COL9A3Q14050 684 aaPredicted RBP9.51□□□□□ -0.89
SMC4-223ENST00000493695 RSPO4Q2I0M5 234 aaPredicted RBP9.51□□□□□ -0.89
SMC4-223ENST00000493695 PSAPL1Q6NUJ1 521 aa9.51□□□□□ -0.89
SMC4-223ENST00000493695 DNAJB12Q9NXW2 375 aaKnown RBP9.51□□□□□ -0.89
SMC4-223ENST00000493695 ITGB7P26010 798 aa9.5□□□□□ -0.89
SMC4-223ENST00000493695 DPYDQ12882 1025 aa9.5□□□□□ -0.89
SMC4-223ENST00000493695 CCINQ13939 588 aa9.5□□□□□ -0.89
SMC4-223ENST00000493695 C20orf204Q6ZNR8 217 aa9.5□□□□□ -0.89
SMC4-223ENST00000493695 KRT25Q7Z3Z0 450 aa9.5□□□□□ -0.89
SMC4-223ENST00000493695 USP21Q9UK80 565 aa9.5□□□□□ -0.89
SMC4-223ENST00000493695 C9orf172C9J069 976 aa9.49□□□□□ -0.89
SMC4-223ENST00000493695 RGS9O75916 674 aaPredicted RBP9.49□□□□□ -0.89
SMC4-223ENST00000493695 EPB42P16452 691 aa9.49□□□□□ -0.89
SMC4-223ENST00000493695 RTN1Q16799 776 aa9.49□□□□□ -0.89
SMC4-223ENST00000493695 POTEAQ6S8J7 498 aa9.49□□□□□ -0.89
SMC4-223ENST00000493695 STAG2Q8N3U4 1231 aa9.49□□□□□ -0.89
SMC4-223ENST00000493695 VTI1AQ96AJ9 217 aa9.49□□□□□ -0.89
SMC4-223ENST00000493695 A0A0A0MRY4 1105 aa9.48□□□□□ -0.89
SMC4-223ENST00000493695 DKK1O94907 266 aa9.48□□□□□ -0.89
SMC4-223ENST00000493695 LMOD1P29536 600 aaPredicted RBP9.48□□□□□ -0.89
SMC4-223ENST00000493695 CRTC2Q53ET0 693 aaPredicted RBP9.48□□□□□ -0.89
SMC4-223ENST00000493695 FAM35AQ86V20 835 aa9.48□□□□□ -0.89
SMC4-223ENST00000493695 DMRTC2Q8IXT2 367 aaPredicted RBP9.48□□□□□ -0.89
SMC4-223ENST00000493695 GSX2Q9BZM3 304 aa9.48□□□□□ -0.89
SMC4-223ENST00000493695 KLK14Q9P0G3 267 aa9.48□□□□□ -0.89
SMC4-223ENST00000493695 DYRK3O43781 588 aa9.47□□□□□ -0.89
SMC4-223ENST00000493695 CPB1P15086 417 aa9.47□□□□□ -0.89
SMC4-223ENST00000493695 ELNP15502 786 aa9.47□□□□□ -0.89
SMC4-223ENST00000493695 NKAPLQ5M9Q1 402 aa9.47□□□□□ -0.89
SMC4-223ENST00000493695 VRTNQ9H8Y1 702 aa9.47□□□□□ -0.89
SMC4-223ENST00000493695 TGFBR3LH3BV60 316 aa9.46□□□□□ -0.9
SMC4-223ENST00000493695 SHISA2Q6UWI4 295 aa9.46□□□□□ -0.9
SMC4-223ENST00000493695 PPP1R12CQ9BZL4 782 aa9.46□□□□□ -0.9
SMC4-223ENST00000493695 USP17L15C9J2P7 530 aa9.45□□□□□ -0.9
SMC4-223ENST00000493695 USP17L10C9JJH3 530 aa9.45□□□□□ -0.9
SMC4-223ENST00000493695 USP17L13C9JLJ4 530 aa9.45□□□□□ -0.9
SMC4-223ENST00000493695 USP17L12C9JPN9 530 aa9.45□□□□□ -0.9
SMC4-223ENST00000493695 USP17L11C9JVI0 530 aa9.45□□□□□ -0.9
SMC4-223ENST00000493695 USP17L21D6R901 530 aa9.45□□□□□ -0.9
SMC4-223ENST00000493695 USP17L18D6R9N7 530 aa9.45□□□□□ -0.9
SMC4-223ENST00000493695 USP17L22D6RA61 530 aa9.45□□□□□ -0.9
SMC4-223ENST00000493695 USP17L17D6RBQ6 530 aa9.45□□□□□ -0.9
SMC4-223ENST00000493695 USP17L19D6RCP7 530 aa9.45□□□□□ -0.9
SMC4-223ENST00000493695 USP17L20D6RJB6 530 aa9.45□□□□□ -0.9
SMC4-223ENST00000493695 IDH3AP50213 366 aa9.45□□□□□ -0.9
SMC4-223ENST00000493695 AFF1P51825 1210 aaKnown RBP9.45□□□□□ -0.9
SMC4-223ENST00000493695 NRG1Q02297 640 aaPredicted RBP9.45□□□□□ -0.9
SMC4-223ENST00000493695 USP17L24Q0WX57 530 aa9.45□□□□□ -0.9
SMC4-223ENST00000493695 PTK7Q13308 1070 aa9.45□□□□□ -0.9
SMC4-223ENST00000493695 DGKZQ13574 1117 aa9.45□□□□□ -0.9
SMC4-223ENST00000493695 ANKMY2Q8IV38 441 aa9.45□□□□□ -0.9
SMC4-223ENST00000493695 EFCC1Q9HA90 598 aa9.45□□□□□ -0.9
SMC4-223ENST00000493695 IGFBP4P22692 258 aa9.44□□□□□ -0.9
SMC4-223ENST00000493695 MLLT1Q03111 559 aaPredicted RBP9.44□□□□□ -0.9
SMC4-223ENST00000493695 IER5Q5VY09 327 aa9.44□□□□□ -0.9
SMC4-223ENST00000493695 NAGPAQ9UK23 515 aa9.44□□□□□ -0.9
SMC4-223ENST00000493695 SELPP16109 830 aa9.43□□□□□ -0.9
SMC4-223ENST00000493695 MBTPS1Q14703 1052 aa9.43□□□□□ -0.9
SMC4-223ENST00000493695 PCSK7Q16549 785 aa9.43□□□□□ -0.9
SMC4-223ENST00000493695 PRSS36Q5K4E3 855 aa9.43□□□□□ -0.9
SMC4-223ENST00000493695 ELMSAN1Q6PJG2 1045 aa9.43□□□□□ -0.9
SMC4-223ENST00000493695 FNBP4Q8N3X1 1017 aaPredicted RBP9.43□□□□□ -0.9
SMC4-223ENST00000493695 TP53INP1Q96A56 240 aa9.43□□□□□ -0.9
SMC4-223ENST00000493695 BCS1LQ9Y276 419 aa9.43□□□□□ -0.9
SMC4-223ENST00000493695 RARAP10276 462 aa9.42□□□□□ -0.9
SMC4-223ENST00000493695 ADGRE1Q14246 886 aa9.42□□□□□ -0.9
SMC4-223ENST00000493695 TXNRD3Q86VQ6 643 aa9.42□□□□□ -0.9
SMC4-223ENST00000493695 SASH3O75995 380 aa9.41□□□□□ -0.9
SMC4-223ENST00000493695 TARSP26639 723 aaKnown RBP9.41□□□□□ -0.9
SMC4-223ENST00000493695 ARSDP51689 593 aa9.41□□□□□ -0.9
SMC4-223ENST00000493695 KANK4Q5T7N3 995 aaPredicted RBP9.41□□□□□ -0.9
SMC4-223ENST00000493695 LENG1Q96BZ8 264 aaPredicted RBP9.41□□□□□ -0.9
SMC4-223ENST00000493695 FAM196BA6NMK8 535 aa9.4□□□□□ -0.9
SMC4-223ENST00000493695 HFE2Q6ZVN8 426 aa9.4□□□□□ -0.9
SMC4-223ENST00000493695 DHX32Q7L7V1 743 aaKnown RBP9.4□□□□□ -0.9
SMC4-223ENST00000493695 NBPF11Q86T75 865 aa9.4□□□□□ -0.9
SMC4-223ENST00000493695 FMR1NBQ8N0W7 255 aaPredicted RBP9.4□□□□□ -0.9
SMC4-223ENST00000493695 MICAL2O94851 1124 aa9.39□□□□□ -0.91
SMC4-223ENST00000493695 RFX1P22670 979 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms