RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 WDR33Q9C0J8 1336 aaKnown RBP23.51■■□□□ 1.35
NUP50-218ENST00000493456 RPGRQ92834 1020 aaKnown RBP23.5■■□□□ 1.35
NUP50-218ENST00000493456 DDX21Q9NR30 783 aaKnown RBP eCLIP23.5■■□□□ 1.35
NUP50-218ENST00000493456 ABT1Q9ULW3 272 aaKnown RBP23.5■■□□□ 1.35
NUP50-218ENST00000493456 THSD7BQ9C0I4 1608 aa23.49■■□□□ 1.35
NUP50-218ENST00000493456 HSPA8P11142 646 aaKnown RBP23.49■■□□□ 1.35
NUP50-218ENST00000493456 MAP3K15Q6ZN16 1313 aa23.49■■□□□ 1.35
NUP50-218ENST00000493456 COL4A5P29400 1685 aa23.48■■□□□ 1.35
NUP50-218ENST00000493456 HOXA10P31260 410 aaPredicted RBP23.48■■□□□ 1.35
NUP50-218ENST00000493456 KIF6Q6ZMV9 814 aa23.48■■□□□ 1.35
NUP50-218ENST00000493456 NUTM1Q86Y26 1132 aa23.48■■□□□ 1.35
NUP50-218ENST00000493456 PNISRQ8TF01 805 aaKnown RBP23.48■■□□□ 1.35
NUP50-218ENST00000493456 GJA3Q9Y6H8 435 aa23.48■■□□□ 1.35
NUP50-218ENST00000493456 LTBP1Q14766 1721 aa23.47■■□□□ 1.35
NUP50-218ENST00000493456 NUP98P52948 1817 aa23.47■■□□□ 1.35
NUP50-218ENST00000493456 PPP2R1AP30153 589 aa23.47■■□□□ 1.35
NUP50-218ENST00000493456 KDM3BQ7LBC6 1761 aa23.47■■□□□ 1.35
NUP50-218ENST00000493456 SCNN1DP51172 638 aa23.46■■□□□ 1.35
NUP50-218ENST00000493456 LARGE2Q8N3Y3 721 aa23.46■■□□□ 1.35
NUP50-218ENST00000493456 ECE1P42892 770 aa23.45■■□□□ 1.34
NUP50-218ENST00000493456 USP50Q70EL3 339 aaPredicted RBP23.45■■□□□ 1.34
NUP50-218ENST00000493456 NGEFQ8N5V2 710 aa23.45■■□□□ 1.34
NUP50-218ENST00000493456 MIS18AQ9NYP9 233 aa23.45■■□□□ 1.34
NUP50-218ENST00000493456 UBN2Q6ZU65 1347 aa23.44■■□□□ 1.34
NUP50-218ENST00000493456 RBM17Q96I25 401 aaKnown RBP23.44■■□□□ 1.34
NUP50-218ENST00000493456 CRAMP1Q96RY5 1269 aa23.44■■□□□ 1.34
NUP50-218ENST00000493456 PPEF1O14829 653 aaPredicted RBP23.43■■□□□ 1.34
NUP50-218ENST00000493456 NEFMP07197 916 aa23.43■■□□□ 1.34
NUP50-218ENST00000493456 ABHD8Q96I13 439 aa23.43■■□□□ 1.34
NUP50-218ENST00000493456 EPS15P42566 896 aa23.42■■□□□ 1.34
NUP50-218ENST00000493456 TTLL7Q6ZT98 887 aa23.42■■□□□ 1.34
NUP50-218ENST00000493456 NIM1KQ8IY84 436 aa23.42■■□□□ 1.34
NUP50-218ENST00000493456 CAPNS2Q96L46 248 aa23.42■■□□□ 1.34
NUP50-218ENST00000493456 BEGAINQ9BUH8 593 aa23.42■■□□□ 1.34
NUP50-218ENST00000493456 GPTP24298 496 aa23.41■■□□□ 1.34
NUP50-218ENST00000493456 EIF4A1P60842 406 aaKnown RBP23.41■■□□□ 1.34
NUP50-218ENST00000493456 SUSD4Q5VX71 490 aa23.41■■□□□ 1.34
NUP50-218ENST00000493456 VPS33BQ9H267 617 aa23.41■■□□□ 1.34
NUP50-218ENST00000493456 RRP7AQ9Y3A4 280 aaKnown RBP23.41■■□□□ 1.34
NUP50-218ENST00000493456 ERBB4Q15303 1308 aa23.4■■□□□ 1.34
NUP50-218ENST00000493456 NTSR2O95665 410 aa23.4■■□□□ 1.34
NUP50-218ENST00000493456 PAXIP1Q6ZW49 1069 aaPredicted RBP23.4■■□□□ 1.34
NUP50-218ENST00000493456 ZNF34Q8IZ26 560 aa23.4■■□□□ 1.34
NUP50-218ENST00000493456 TMX4Q9H1E5 349 aaPredicted RBP23.4■■□□□ 1.34
NUP50-218ENST00000493456 ZBTB3Q9H5J0 574 aa23.4■■□□□ 1.34
NUP50-218ENST00000493456 TRPM7Q96QT4 1865 aa23.4■■□□□ 1.34
NUP50-218ENST00000493456 MYL6BP14649 208 aa23.39■■□□□ 1.33
NUP50-218ENST00000493456 PPP1R42Q7Z4L9 355 aa23.39■■□□□ 1.33
NUP50-218ENST00000493456 GPR101Q96P66 508 aaPredicted RBP23.39■■□□□ 1.33
NUP50-218ENST00000493456 DLG5Q8TDM6 1919 aa23.39■■□□□ 1.33
NUP50-218ENST00000493456 PPIP5K2O43314 1243 aa23.38■■□□□ 1.33
NUP50-218ENST00000493456 PARP10Q53GL7 1025 aa23.38■■□□□ 1.33
NUP50-218ENST00000493456 GIGYF2Q6Y7W6 1299 aaKnown RBP23.38■■□□□ 1.33
NUP50-218ENST00000493456 ADARB2Q9NS39 739 aaKnown RBP23.38■■□□□ 1.33
NUP50-218ENST00000493456 TLL2Q9Y6L7 1015 aa23.38■■□□□ 1.33
NUP50-218ENST00000493456 CST9Q5W186 159 aa23.37■■□□□ 1.33
NUP50-218ENST00000493456 CYP4F22Q6NT55 531 aa23.37■■□□□ 1.33
NUP50-218ENST00000493456 NLRP3Q96P20 1036 aa23.37■■□□□ 1.33
NUP50-218ENST00000493456 GPRC5DQ9NZD1 345 aa23.37■■□□□ 1.33
NUP50-218ENST00000493456 FMR1Q06787 632 aaKnown RBP eCLIP23.36■■□□□ 1.33
NUP50-218ENST00000493456 SUPT20HQ8NEM7 779 aa23.36■■□□□ 1.33
NUP50-218ENST00000493456 ATP6V0A2Q9Y487 856 aa23.36■■□□□ 1.33
NUP50-218ENST00000493456 TRAF5O00463 557 aa23.35■■□□□ 1.33
NUP50-218ENST00000493456 TCERG1O14776 1098 aaKnown RBP23.35■■□□□ 1.33
NUP50-218ENST00000493456 MAP2K2P36507 400 aa23.35■■□□□ 1.33
NUP50-218ENST00000493456 AOC3Q16853 763 aa23.35■■□□□ 1.33
NUP50-218ENST00000493456 GRM1Q13255 1194 aa23.34■■□□□ 1.33
NUP50-218ENST00000493456 NFE2L2Q16236 605 aa23.34■■□□□ 1.33
NUP50-218ENST00000493456 FAM161AQ3B820 660 aa23.34■■□□□ 1.33
NUP50-218ENST00000493456 C3orf67Q6ZVT6 689 aa23.34■■□□□ 1.33
NUP50-218ENST00000493456 SLC51AQ86UW1 340 aa23.34■■□□□ 1.33
NUP50-218ENST00000493456 ZNRF3Q9ULT6 936 aa23.34■■□□□ 1.33
NUP50-218ENST00000493456 CDHR2Q9BYE9 1310 aa23.33■■□□□ 1.33
NUP50-218ENST00000493456 RTFDC1Q9BY42 306 aaPredicted RBP23.33■■□□□ 1.33
NUP50-218ENST00000493456 CA12O43570 354 aa23.32■■□□□ 1.32
NUP50-218ENST00000493456 CXCL9Q07325 125 aa23.32■■□□□ 1.32
NUP50-218ENST00000493456 SLC10A5Q5PT55 438 aa23.32■■□□□ 1.32
NUP50-218ENST00000493456 HHIPL1Q96JK4 782 aa23.32■■□□□ 1.32
NUP50-218ENST00000493456 PLEKHF1Q96S99 279 aa23.32■■□□□ 1.32
NUP50-218ENST00000493456 UTP14AQ9BVJ6 771 aaKnown RBP23.32■■□□□ 1.32
NUP50-218ENST00000493456 ABCC4O15439 1325 aa23.32■■□□□ 1.32
NUP50-218ENST00000493456 SAPCD2Q86UD0 394 aa23.31■■□□□ 1.32
NUP50-218ENST00000493456 CELF2O95319 508 aaKnown RBP23.3■■□□□ 1.32
NUP50-218ENST00000493456 THUMPD2Q9BTF0 503 aaKnown RBP23.3■■□□□ 1.32
NUP50-218ENST00000493456 PNNQ9H307 717 aaKnown RBP23.3■■□□□ 1.32
NUP50-218ENST00000493456 BBOX1O75936 387 aa23.29■■□□□ 1.32
NUP50-218ENST00000493456 SLC34A2O95436 690 aa23.29■■□□□ 1.32
NUP50-218ENST00000493456 GMPSP49915 693 aaPredicted RBP23.29■■□□□ 1.32
NUP50-218ENST00000493456 DPP8Q6V1X1 898 aaPredicted RBP23.29■■□□□ 1.32
NUP50-218ENST00000493456 LRP10Q7Z4F1 713 aa23.29■■□□□ 1.32
NUP50-218ENST00000493456 ZC3H15Q8WU90 426 aaKnown RBP23.29■■□□□ 1.32
NUP50-218ENST00000493456 PGAP2Q9UHJ9 254 aa23.29■■□□□ 1.32
NUP50-218ENST00000493456 MAPK8IP3Q9UPT6 1336 aa23.29■■□□□ 1.32
NUP50-218ENST00000493456 CCDC85CA6NKD9 419 aa23.28■■□□□ 1.32
NUP50-218ENST00000493456 AOC2O75106 756 aa23.28■■□□□ 1.32
NUP50-218ENST00000493456 KIAA2012Q0VF49 1180 aa23.28■■□□□ 1.32
NUP50-218ENST00000493456 CIAPIN1Q6FI81 312 aa23.28■■□□□ 1.32
NUP50-218ENST00000493456 SP8Q8IXZ3 490 aa23.28■■□□□ 1.32
NUP50-218ENST00000493456 TSPYL4Q9UJ04 414 aa23.28■■□□□ 1.32
NUP50-218ENST00000493456 RGS19P49795 217 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms