RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 PRR5LQ6MZQ0 368 aa10.33□□□□□ -0.76
TM4SF1-204ENST00000493348 SLC4A10Q6U841 1118 aa10.33□□□□□ -0.76
TM4SF1-204ENST00000493348 LRP10Q7Z4F1 713 aa10.33□□□□□ -0.76
TM4SF1-204ENST00000493348 C2CD5Q86YS7 1000 aa10.33□□□□□ -0.76
TM4SF1-204ENST00000493348 ZNF34Q8IZ26 560 aa10.33□□□□□ -0.76
TM4SF1-204ENST00000493348 TRMT2AQ8IZ69 625 aaKnown RBP10.33□□□□□ -0.76
TM4SF1-204ENST00000493348 DNAAF4Q8WXU2 420 aa10.33□□□□□ -0.76
TM4SF1-204ENST00000493348 ZNF622Q969S3 477 aaKnown RBP eCLIP10.33□□□□□ -0.76
TM4SF1-204ENST00000493348 METTL22Q9BUU2 404 aaPredicted RBP10.33□□□□□ -0.76
TM4SF1-204ENST00000493348 BRIP1Q9BX63 1249 aa10.33□□□□□ -0.76
TM4SF1-204ENST00000493348 PTPRCP08575 1304 aa10.33□□□□□ -0.76
TM4SF1-204ENST00000493348 IBTKQ9P2D0 1353 aaPredicted RBP10.32□□□□□ -0.76
TM4SF1-204ENST00000493348 A0A0G2JLW4 131 aa10.32□□□□□ -0.76
TM4SF1-204ENST00000493348 IPO8O15397 1037 aaKnown RBP10.32□□□□□ -0.76
TM4SF1-204ENST00000493348 SUSD4Q5VX71 490 aa10.32□□□□□ -0.76
TM4SF1-204ENST00000493348 CCDC24Q8N4L8 307 aa10.32□□□□□ -0.76
TM4SF1-204ENST00000493348 CCDC191Q8NCU4 936 aa10.32□□□□□ -0.76
TM4SF1-204ENST00000493348 NLGN2Q8NFZ4 835 aa10.32□□□□□ -0.76
TM4SF1-204ENST00000493348 RPGRQ92834 1020 aaKnown RBP10.32□□□□□ -0.76
TM4SF1-204ENST00000493348 NLRP3Q96P20 1036 aa10.32□□□□□ -0.76
TM4SF1-204ENST00000493348 BCL2L13Q9BXK5 485 aa10.32□□□□□ -0.76
TM4SF1-204ENST00000493348 TMX4Q9H1E5 349 aaPredicted RBP10.32□□□□□ -0.76
TM4SF1-204ENST00000493348 CWC25Q9NXE8 425 aaPredicted RBP10.32□□□□□ -0.76
TM4SF1-204ENST00000493348 PIM2Q9P1W9 311 aa10.32□□□□□ -0.76
TM4SF1-204ENST00000493348 SH3TC1Q8TE82 1336 aa10.32□□□□□ -0.76
TM4SF1-204ENST00000493348 KIF16BQ96L93 1317 aa10.32□□□□□ -0.76
TM4SF1-204ENST00000493348 DPEP1P16444 411 aa10.31□□□□□ -0.76
TM4SF1-204ENST00000493348 G2E3Q7L622 706 aa10.31□□□□□ -0.76
TM4SF1-204ENST00000493348 NLRP10Q86W26 655 aa10.31□□□□□ -0.76
TM4SF1-204ENST00000493348 NUTM1Q86Y26 1132 aa10.31□□□□□ -0.76
TM4SF1-204ENST00000493348 MRPL50Q8N5N7 158 aaKnown RBP10.31□□□□□ -0.76
TM4SF1-204ENST00000493348 SSH1Q8WYL5 1049 aa10.31□□□□□ -0.76
TM4SF1-204ENST00000493348 WWC3Q9ULE0 1092 aa10.31□□□□□ -0.76
TM4SF1-204ENST00000493348 BCS1LQ9Y276 419 aa10.31□□□□□ -0.76
TM4SF1-204ENST00000493348 CACNA1SQ13698 1873 aa10.31□□□□□ -0.76
TM4SF1-204ENST00000493348 UBN2Q6ZU65 1347 aa10.31□□□□□ -0.76
TM4SF1-204ENST00000493348 GRIN3BO60391 1043 aa10.3□□□□□ -0.76
TM4SF1-204ENST00000493348 ALDH1B1P30837 517 aa10.3□□□□□ -0.76
TM4SF1-204ENST00000493348 TRIM28Q13263 835 aaKnown RBP10.3□□□□□ -0.76
TM4SF1-204ENST00000493348 ERFEQ4G0M1 354 aa10.3□□□□□ -0.76
TM4SF1-204ENST00000493348 DALRD3Q5D0E6 543 aaKnown RBP10.3□□□□□ -0.76
TM4SF1-204ENST00000493348 FRAT1Q92837 279 aaPredicted RBP10.3□□□□□ -0.76
TM4SF1-204ENST00000493348 CNKSR1Q969H4 720 aa10.3□□□□□ -0.76
TM4SF1-204ENST00000493348 MASTLQ96GX5 879 aa10.3□□□□□ -0.76
TM4SF1-204ENST00000493348 RBM17Q96I25 401 aaKnown RBP10.3□□□□□ -0.76
TM4SF1-204ENST00000493348 ISCA1Q9BUE6 129 aa10.3□□□□□ -0.76
TM4SF1-204ENST00000493348 API5Q9BZZ5 524 aaKnown RBP10.3□□□□□ -0.76
TM4SF1-204ENST00000493348 ANKRD31Q8N7Z5 1873 aa10.3□□□□□ -0.76
TM4SF1-204ENST00000493348 NTSR2O95665 410 aa10.29□□□□□ -0.76
TM4SF1-204ENST00000493348 NPR1P16066 1061 aa10.29□□□□□ -0.76
TM4SF1-204ENST00000493348 CHRNA5P30532 468 aa10.29□□□□□ -0.76
TM4SF1-204ENST00000493348 RARSP54136 660 aaKnown RBP10.29□□□□□ -0.76
TM4SF1-204ENST00000493348 RTL5Q5HYW3 569 aaPredicted RBP10.29□□□□□ -0.76
TM4SF1-204ENST00000493348 TTLL6Q8N841 843 aa10.29□□□□□ -0.76
TM4SF1-204ENST00000493348 ZBTB38Q8NAP3 1195 aaPredicted RBP10.29□□□□□ -0.76
TM4SF1-204ENST00000493348 LINS1Q8NG48 757 aa10.29□□□□□ -0.76
TM4SF1-204ENST00000493348 SRCIN1Q9C0H9 1055 aa10.29□□□□□ -0.76
TM4SF1-204ENST00000493348 C9orf78Q9NZ63 289 aaPredicted RBP10.29□□□□□ -0.76
TM4SF1-204ENST00000493348 PXDNLA1KZ92 1463 aa10.29□□□□□ -0.76
TM4SF1-204ENST00000493348 DLEC1Q9Y238 1755 aa10.29□□□□□ -0.76
TM4SF1-204ENST00000493348 MYH3P11055 1940 aa10.29□□□□□ -0.76
TM4SF1-204ENST00000493348 ADCY9O60503 1353 aa10.28□□□□□ -0.76
TM4SF1-204ENST00000493348 F6X3S4 739 aa10.28□□□□□ -0.76
TM4SF1-204ENST00000493348 IRS4O14654 1257 aaPredicted RBP10.28□□□□□ -0.76
TM4SF1-204ENST00000493348 PCCAP05165 728 aaPredicted RBP10.28□□□□□ -0.76
TM4SF1-204ENST00000493348 STYK1Q6J9G0 422 aa10.28□□□□□ -0.76
TM4SF1-204ENST00000493348 DDX46Q7L014 1031 aaKnown RBP10.28□□□□□ -0.76
TM4SF1-204ENST00000493348 FAM89AQ96GI7 184 aa10.28□□□□□ -0.76
TM4SF1-204ENST00000493348 NOB1Q9ULX3 412 aaKnown RBP10.28□□□□□ -0.76
TM4SF1-204ENST00000493348 CHD4Q14839 1912 aa10.27□□□□□ -0.76
TM4SF1-204ENST00000493348 NEURL1BA8MQ27 555 aa10.27□□□□□ -0.77
TM4SF1-204ENST00000493348 ALDH1L1O75891 902 aa10.27□□□□□ -0.77
TM4SF1-204ENST00000493348 MS4A1P11836 297 aa10.27□□□□□ -0.77
TM4SF1-204ENST00000493348 HCLS1P14317 486 aaPredicted RBP10.27□□□□□ -0.77
TM4SF1-204ENST00000493348 CWF19L2Q2TBE0 894 aaKnown RBP10.27□□□□□ -0.77
TM4SF1-204ENST00000493348 SOGA3Q5TF21 947 aa10.27□□□□□ -0.77
TM4SF1-204ENST00000493348 FTSJ3Q8IY81 847 aaKnown RBP10.27□□□□□ -0.77
TM4SF1-204ENST00000493348 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.27□□□□□ -0.77
TM4SF1-204ENST00000493348 HDAC5Q9UQL6 1122 aa10.27□□□□□ -0.77
TM4SF1-204ENST00000493348 ARFGEF1Q9Y6D6 1849 aa10.27□□□□□ -0.77
TM4SF1-204ENST00000493348 BRCA1P38398 1863 aaKnown RBP10.27□□□□□ -0.77
TM4SF1-204ENST00000493348 RIC1Q4ADV7 1423 aa10.26□□□□□ -0.77
TM4SF1-204ENST00000493348 PDE8AO60658 829 aa10.26□□□□□ -0.77
TM4SF1-204ENST00000493348 SRGNP10124 158 aa10.26□□□□□ -0.77
TM4SF1-204ENST00000493348 CCT4P50991 539 aaKnown RBP10.26□□□□□ -0.77
TM4SF1-204ENST00000493348 GCKRQ14397 625 aa10.26□□□□□ -0.77
TM4SF1-204ENST00000493348 CCDC152Q4G0S7 254 aa10.26□□□□□ -0.77
TM4SF1-204ENST00000493348 SLC10A5Q5PT55 438 aa10.26□□□□□ -0.77
TM4SF1-204ENST00000493348 ZKSCAN2Q63HK3 967 aa10.26□□□□□ -0.77
TM4SF1-204ENST00000493348 UBE3BQ7Z3V4 1068 aa10.26□□□□□ -0.77
TM4SF1-204ENST00000493348 LAMB2P55268 1798 aa10.26□□□□□ -0.77
TM4SF1-204ENST00000493348 ABCC12Q96J65 1359 aa10.26□□□□□ -0.77
TM4SF1-204ENST00000493348 COL11A2P13942 1736 aaPredicted RBP10.25□□□□□ -0.77
TM4SF1-204ENST00000493348 KIAA1551Q9HCM1 1747 aa10.25□□□□□ -0.77
TM4SF1-204ENST00000493348 IGKV5-2P06315 115 aa10.25□□□□□ -0.77
TM4SF1-204ENST00000493348 BRPF1P55201 1214 aaPredicted RBP10.25□□□□□ -0.77
TM4SF1-204ENST00000493348 BEND3Q5T5X7 828 aa10.25□□□□□ -0.77
TM4SF1-204ENST00000493348 ARHGAP27Q6ZUM4 889 aa10.25□□□□□ -0.77
TM4SF1-204ENST00000493348 ARHGAP45Q92619 1136 aa10.25□□□□□ -0.77
TM4SF1-204ENST00000493348 CHMP3Q9Y3E7 222 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms