RNA–Protein interactions for RNA: ENST00000493277.5

ZNF655-222, Transcript of zinc finger protein 655, human

APPRIS ALT2 TSL 2 BASIC

Gene ZNF655, Length 1,815 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF655-222	ENST00000493277	BRCA1	P38398	1863 aa	Known RBP	10.7	□□□□□ -0.7
ZNF655-222	ENST00000493277	ZPR1	O75312	459 aa		10.7	□□□□□ -0.7
ZNF655-222	ENST00000493277	CC2D1B	Q5T0F9	858 aa	Known RBP	10.7	□□□□□ -0.7
ZNF655-222	ENST00000493277	DNAJC10	Q8IXB1	793 aa		10.7	□□□□□ -0.7
ZNF655-222	ENST00000493277	SLC52A2	Q9HAB3	445 aa		10.7	□□□□□ -0.7
ZNF655-222	ENST00000493277	LGR6	Q9HBX8	967 aa		10.7	□□□□□ -0.7
ZNF655-222	ENST00000493277	PIM2	Q9P1W9	311 aa		10.7	□□□□□ -0.7
ZNF655-222	ENST00000493277	USP42	Q9H9J4	1324 aa	Known RBP	10.7	□□□□□ -0.7
ZNF655-222	ENST00000493277	ARFGEF1	Q9Y6D6	1849 aa		10.69	□□□□□ -0.7
ZNF655-222	ENST00000493277	SLC39A6	Q13433	755 aa		10.69	□□□□□ -0.7
ZNF655-222	ENST00000493277	SLC4A5	Q9BY07	1137 aa		10.69	□□□□□ -0.7
ZNF655-222	ENST00000493277	KIF7	Q2M1P5	1343 aa		10.68	□□□□□ -0.7
ZNF655-222	ENST00000493277	RNMT	O43148	476 aa	Known RBP	10.68	□□□□□ -0.7
ZNF655-222	ENST00000493277	DALRD3	Q5D0E6	543 aa	Known RBP	10.68	□□□□□ -0.7
ZNF655-222	ENST00000493277	USPL1	Q5W0Q7	1092 aa		10.68	□□□□□ -0.7
ZNF655-222	ENST00000493277	HR	O43593	1189 aa		10.68	□□□□□ -0.7
ZNF655-222	ENST00000493277	DIAPH1	O60610	1272 aa	Known RBP	10.68	□□□□□ -0.7
ZNF655-222	ENST00000493277	DDR1	Q08345	913 aa		10.68	□□□□□ -0.7
ZNF655-222	ENST00000493277	C9orf131	Q5VYM1	1079 aa		10.68	□□□□□ -0.7
ZNF655-222	ENST00000493277	INTS5	Q6P9B9	1019 aa	Known RBP	10.68	□□□□□ -0.7
ZNF655-222	ENST00000493277	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.68	□□□□□ -0.7
ZNF655-222	ENST00000493277	DDX12P	Q92771	950 aa		10.68	□□□□□ -0.7
ZNF655-222	ENST00000493277	CHRNA5	P30532	468 aa		10.67	□□□□□ -0.7
ZNF655-222	ENST00000493277	VPS9D1	Q9Y2B5	631 aa		10.67	□□□□□ -0.7
ZNF655-222	ENST00000493277	AFDN	P55196	1824 aa	Known RBP	10.66	□□□□□ -0.7
ZNF655-222	ENST00000493277	U2SURP	O15042	1029 aa	Known RBP	10.66	□□□□□ -0.7
ZNF655-222	ENST00000493277	KCNA3	P22001	575 aa		10.66	□□□□□ -0.7
ZNF655-222	ENST00000493277	MTHFSD	Q2M296	383 aa	Known RBP	10.66	□□□□□ -0.7
ZNF655-222	ENST00000493277	TTC5	Q8N0Z6	440 aa		10.66	□□□□□ -0.7
ZNF655-222	ENST00000493277	ZBED2	Q9BTP6	218 aa		10.66	□□□□□ -0.7
ZNF655-222	ENST00000493277	NMRK2	Q9NPI5	230 aa		10.66	□□□□□ -0.7
ZNF655-222	ENST00000493277	RNF181	Q9P0P0	153 aa		10.66	□□□□□ -0.7
ZNF655-222	ENST00000493277	SOS1	Q07889	1333 aa	Predicted RBP	10.66	□□□□□ -0.7
ZNF655-222	ENST00000493277	POLRMT	O00411	1230 aa	Known RBP	10.65	□□□□□ -0.7
ZNF655-222	ENST00000493277	TOMM70	O94826	608 aa		10.65	□□□□□ -0.7
ZNF655-222	ENST00000493277	CYP19A1	P11511	503 aa	Predicted RBP	10.65	□□□□□ -0.7
ZNF655-222	ENST00000493277	COL15A1	P39059	1388 aa		10.65	□□□□□ -0.7
ZNF655-222	ENST00000493277	CANX	P27824	592 aa	Known RBP	10.65	□□□□□ -0.71
ZNF655-222	ENST00000493277	ZBTB1	Q9Y2K1	713 aa		10.65	□□□□□ -0.71
ZNF655-222	ENST00000493277	SBF1	O95248	1867 aa		10.65	□□□□□ -0.71
ZNF655-222	ENST00000493277	PPP1R3G	B7ZBB8	358 aa		10.64	□□□□□ -0.71
ZNF655-222	ENST00000493277	TM4SF1	P30408	202 aa		10.64	□□□□□ -0.71
ZNF655-222	ENST00000493277	APLP1	P51693	650 aa		10.64	□□□□□ -0.71
ZNF655-222	ENST00000493277	BICDL1	Q6ZP65	573 aa		10.64	□□□□□ -0.71
ZNF655-222	ENST00000493277	NARF	Q9UHQ1	456 aa		10.64	□□□□□ -0.71
ZNF655-222	ENST00000493277	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.64	□□□□□ -0.71
ZNF655-222	ENST00000493277	CCDC88A	Q3V6T2	1871 aa		10.64	□□□□□ -0.71
ZNF655-222	ENST00000493277	ADAMTS7	Q9UKP4	1686 aa		10.64	□□□□□ -0.71
ZNF655-222	ENST00000493277	KDM2B	Q8NHM5	1336 aa		10.64	□□□□□ -0.71
ZNF655-222	ENST00000493277	MRC1	P22897	1456 aa		10.63	□□□□□ -0.71
ZNF655-222	ENST00000493277	TEF	Q10587	303 aa		10.63	□□□□□ -0.71
ZNF655-222	ENST00000493277	NFIX	Q14938	502 aa		10.63	□□□□□ -0.71
ZNF655-222	ENST00000493277	IFFO2	Q5TF58	517 aa		10.63	□□□□□ -0.71
ZNF655-222	ENST00000493277	KCP	Q6ZWJ8	1503 aa		10.63	□□□□□ -0.71
ZNF655-222	ENST00000493277	STARD3NL	O95772	234 aa		10.63	□□□□□ -0.71
ZNF655-222	ENST00000493277	SERPINB2	P05120	415 aa		10.63	□□□□□ -0.71
ZNF655-222	ENST00000493277	NPM2	Q86SE8	214 aa	Known RBP	10.63	□□□□□ -0.71
ZNF655-222	ENST00000493277	NBR1	Q14596	966 aa		10.62	□□□□□ -0.71
ZNF655-222	ENST00000493277	C6orf132	Q5T0Z8	1188 aa		10.62	□□□□□ -0.71
ZNF655-222	ENST00000493277	VSIG10	Q8N0Z9	540 aa		10.62	□□□□□ -0.71
ZNF655-222	ENST00000493277	UBR2	Q8IWV8	1755 aa		10.61	□□□□□ -0.71
ZNF655-222	ENST00000493277	GNAT3	A8MTJ3	354 aa		10.61	□□□□□ -0.71
ZNF655-222	ENST00000493277	NPHP1	O15259	732 aa		10.61	□□□□□ -0.71
ZNF655-222	ENST00000493277	PER1	O15534	1290 aa	Predicted RBP	10.61	□□□□□ -0.71
ZNF655-222	ENST00000493277	RASSF7	Q02833	373 aa		10.61	□□□□□ -0.71
ZNF655-222	ENST00000493277	GAS2L2	Q8NHY3	880 aa		10.61	□□□□□ -0.71
ZNF655-222	ENST00000493277	RRAGC	Q9HB90	399 aa		10.61	□□□□□ -0.71
ZNF655-222	ENST00000493277		A0A087WZG4	1122 aa		10.61	□□□□□ -0.71
ZNF655-222	ENST00000493277		H0YIN7	160 aa		10.61	□□□□□ -0.71
ZNF655-222	ENST00000493277	C2CD5	Q86YS7	1000 aa		10.61	□□□□□ -0.71
ZNF655-222	ENST00000493277	TTLL6	Q8N841	843 aa		10.61	□□□□□ -0.71
ZNF655-222	ENST00000493277	RBM46	Q8TBY0	533 aa	Known RBP	10.61	□□□□□ -0.71
ZNF655-222	ENST00000493277	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.6	□□□□□ -0.71
ZNF655-222	ENST00000493277	COL9A1	P20849	921 aa		10.6	□□□□□ -0.71
ZNF655-222	ENST00000493277	ZNF496	Q96IT1	587 aa	Predicted RBP	10.6	□□□□□ -0.71
ZNF655-222	ENST00000493277	WDR90	Q96KV7	1748 aa		10.6	□□□□□ -0.71
ZNF655-222	ENST00000493277	DLEC1	Q9Y238	1755 aa		10.59	□□□□□ -0.71
ZNF655-222	ENST00000493277	ZNF790	Q6PG37	636 aa		10.59	□□□□□ -0.71
ZNF655-222	ENST00000493277	ZNF622	Q969S3	477 aa	Known RBP eCLIP	10.59	□□□□□ -0.71	9e-6	■□□□□ 9.4
ZNF655-222	ENST00000493277	CFAP53	Q96M91	514 aa		10.59	□□□□□ -0.71
ZNF655-222	ENST00000493277	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.59	□□□□□ -0.71
ZNF655-222	ENST00000493277	TBC1D2B	Q9UPU7	963 aa		10.59	□□□□□ -0.71
ZNF655-222	ENST00000493277	NRXN2	Q9P2S2	1712 aa		10.59	□□□□□ -0.71
ZNF655-222	ENST00000493277	HEG1	Q9ULI3	1381 aa		10.59	□□□□□ -0.71
ZNF655-222	ENST00000493277	CACNA1S	Q13698	1873 aa		10.58	□□□□□ -0.72
ZNF655-222	ENST00000493277	GRXCR2	A6NFK2	248 aa		10.58	□□□□□ -0.72
ZNF655-222	ENST00000493277	LMNB1	P20700	586 aa		10.58	□□□□□ -0.72
ZNF655-222	ENST00000493277	EIF5	P55010	431 aa	Known RBP	10.58	□□□□□ -0.72
ZNF655-222	ENST00000493277	IL17RE	Q8NFR9	667 aa		10.58	□□□□□ -0.72
ZNF655-222	ENST00000493277	FMNL2	Q96PY5	1086 aa		10.58	□□□□□ -0.72
ZNF655-222	ENST00000493277	CARMIL3	Q8ND23	1372 aa		10.58	□□□□□ -0.72
ZNF655-222	ENST00000493277	SIPA1L3	O60292	1781 aa	Predicted RBP	10.58	□□□□□ -0.72
ZNF655-222	ENST00000493277	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.58	□□□□□ -0.72
ZNF655-222	ENST00000493277	MAP3K7	O43318	606 aa		10.58	□□□□□ -0.72
ZNF655-222	ENST00000493277	HTRA3	P83110	453 aa		10.58	□□□□□ -0.72
ZNF655-222	ENST00000493277	FSTL1	Q12841	308 aa		10.58	□□□□□ -0.72
ZNF655-222	ENST00000493277	TBC1D9B	Q66K14	1250 aa		10.58	□□□□□ -0.72
ZNF655-222	ENST00000493277	CCDC24	Q8N4L8	307 aa		10.58	□□□□□ -0.72
ZNF655-222	ENST00000493277	KCNV2	Q8TDN2	545 aa		10.58	□□□□□ -0.72
ZNF655-222	ENST00000493277	COL3A1	P02461	1466 aa	Predicted RBP	10.57	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms