RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 AKT1S1Q96B36 256 aa17.56■□□□□ 0.4
PDZRN3-210ENST00000492909 SLC15A2Q16348 729 aa17.55■□□□□ 0.4
PDZRN3-210ENST00000492909 AMIGO3Q86WK7 504 aa17.55■□□□□ 0.4
PDZRN3-210ENST00000492909 SUCLG2Q96I99 432 aa17.55■□□□□ 0.4
PDZRN3-210ENST00000492909 AK7Q96M32 723 aa17.55■□□□□ 0.4
PDZRN3-210ENST00000492909 STK32BQ9NY57 414 aa17.55■□□□□ 0.4
PDZRN3-210ENST00000492909 H7C1W4 665 aa17.54■□□□□ 0.4
PDZRN3-210ENST00000492909 DCTPP1Q9H773 170 aa17.54■□□□□ 0.4
PDZRN3-210ENST00000492909 SCN7AQ01118 1682 aa17.54■□□□□ 0.4
PDZRN3-210ENST00000492909 UBR3Q6ZT12 1888 aa17.54■□□□□ 0.4
PDZRN3-210ENST00000492909 PNMA6EA0A0J9YXQ4 647 aa17.53■□□□□ 0.4
PDZRN3-210ENST00000492909 MTX1Q13505 466 aa17.53■□□□□ 0.4
PDZRN3-210ENST00000492909 PDGFDQ9GZP0 370 aaPredicted RBP17.53■□□□□ 0.4
PDZRN3-210ENST00000492909 ZNF652Q9Y2D9 606 aa17.53■□□□□ 0.4
PDZRN3-210ENST00000492909 GPTP24298 496 aa17.53■□□□□ 0.4
PDZRN3-210ENST00000492909 CASP7P55210 303 aa17.53■□□□□ 0.4
PDZRN3-210ENST00000492909 PPP1R42Q7Z4L9 355 aa17.53■□□□□ 0.4
PDZRN3-210ENST00000492909 NLRP10Q86W26 655 aa17.53■□□□□ 0.4
PDZRN3-210ENST00000492909 KAZALD1Q96I82 304 aa17.53■□□□□ 0.4
PDZRN3-210ENST00000492909 TFCP2L1Q9NZI6 479 aa17.53■□□□□ 0.4
PDZRN3-210ENST00000492909 PDZRN3Q9UPQ7 1066 aa17.53■□□□□ 0.4
PDZRN3-210ENST00000492909 C4AP0C0L4 1744 aa17.52■□□□□ 0.4
PDZRN3-210ENST00000492909 RGL2O15211 777 aa17.52■□□□□ 0.4
PDZRN3-210ENST00000492909 SRGAP3O43295 1099 aa17.52■□□□□ 0.4
PDZRN3-210ENST00000492909 CLEC4GQ6UXB4 293 aa17.52■□□□□ 0.4
PDZRN3-210ENST00000492909 ERICH6Q7L0X2 663 aa17.52■□□□□ 0.4
PDZRN3-210ENST00000492909 ZNF34Q8IZ26 560 aa17.52■□□□□ 0.4
PDZRN3-210ENST00000492909 SSH3Q8TE77 659 aa17.52■□□□□ 0.4
PDZRN3-210ENST00000492909 JARID2Q92833 1246 aaPredicted RBP17.52■□□□□ 0.4
PDZRN3-210ENST00000492909 BICC1Q9H694 974 aaKnown RBP17.52■□□□□ 0.4
PDZRN3-210ENST00000492909 TUBGCP6Q96RT7 1819 aa17.51■□□□□ 0.39
PDZRN3-210ENST00000492909 POLA2Q14181 598 aa17.51■□□□□ 0.39
PDZRN3-210ENST00000492909 NARFQ9UHQ1 456 aa17.51■□□□□ 0.39
PDZRN3-210ENST00000492909 PHF14O94880 888 aa17.51■□□□□ 0.39
PDZRN3-210ENST00000492909 PCCAP05165 728 aaPredicted RBP17.51■□□□□ 0.39
PDZRN3-210ENST00000492909 UBN2Q6ZU65 1347 aa17.5■□□□□ 0.39
PDZRN3-210ENST00000492909 ZPR1O75312 459 aa17.5■□□□□ 0.39
PDZRN3-210ENST00000492909 ADRA2BP18089 450 aa17.5■□□□□ 0.39
PDZRN3-210ENST00000492909 NUCB1Q02818 461 aa17.5■□□□□ 0.39
PDZRN3-210ENST00000492909 RTL5Q5HYW3 569 aaPredicted RBP17.5■□□□□ 0.39
PDZRN3-210ENST00000492909 TRAPPC3LQ5T215 181 aa17.5■□□□□ 0.39
PDZRN3-210ENST00000492909 SKAP1Q86WV1 359 aa17.5■□□□□ 0.39
PDZRN3-210ENST00000492909 ZBTB38Q8NAP3 1195 aaPredicted RBP17.5■□□□□ 0.39
PDZRN3-210ENST00000492909 ARHGEF1Q92888 912 aaKnown RBP17.5■□□□□ 0.39
PDZRN3-210ENST00000492909 PARP10Q53GL7 1025 aa17.49■□□□□ 0.39
PDZRN3-210ENST00000492909 PNPLA7Q6ZV29 1317 aa17.49■□□□□ 0.39
PDZRN3-210ENST00000492909 RFC4P35249 363 aa17.48■□□□□ 0.39
PDZRN3-210ENST00000492909 EPHA10Q5JZY3 1008 aa17.48■□□□□ 0.39
PDZRN3-210ENST00000492909 ANKRD45Q5TZF3 282 aa17.48■□□□□ 0.39
PDZRN3-210ENST00000492909 NIP7Q9Y221 180 aaKnown RBP eCLIP17.48■□□□□ 0.39
PDZRN3-210ENST00000492909 RGS3P49796 1198 aa17.48■□□□□ 0.39
PDZRN3-210ENST00000492909 RABL6Q3YEC7 729 aaPredicted RBP17.48■□□□□ 0.39
PDZRN3-210ENST00000492909 USPL1Q5W0Q7 1092 aa17.48■□□□□ 0.39
PDZRN3-210ENST00000492909 CHD1LQ86WJ1 897 aa17.48■□□□□ 0.39
PDZRN3-210ENST00000492909 FAM89AQ96GI7 184 aa17.48■□□□□ 0.39
PDZRN3-210ENST00000492909 TRMT112Q9UI30 125 aaKnown RBP17.48■□□□□ 0.39
PDZRN3-210ENST00000492909 MYH3P11055 1940 aa17.47■□□□□ 0.39
PDZRN3-210ENST00000492909 CDHR2Q9BYE9 1310 aa17.47■□□□□ 0.39
PDZRN3-210ENST00000492909 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.47■□□□□ 0.39
PDZRN3-210ENST00000492909 SSFA2P28290 1259 aa17.47■□□□□ 0.39
PDZRN3-210ENST00000492909 ZBTB47Q9UFB7 747 aaPredicted RBP17.47■□□□□ 0.39
PDZRN3-210ENST00000492909 SRP68Q9UHB9 627 aaKnown RBP17.47■□□□□ 0.39
PDZRN3-210ENST00000492909 EXOC6BQ9Y2D4 811 aa17.47■□□□□ 0.39
PDZRN3-210ENST00000492909 USP42Q9H9J4 1324 aaKnown RBP17.47■□□□□ 0.39
PDZRN3-210ENST00000492909 FOXO4P98177 505 aa17.46■□□□□ 0.39
PDZRN3-210ENST00000492909 COL23A1Q86Y22 540 aaPredicted RBP17.46■□□□□ 0.39
PDZRN3-210ENST00000492909 SURF6O75683 361 aaKnown RBP17.45■□□□□ 0.38
PDZRN3-210ENST00000492909 SUSD4Q5VX71 490 aa17.45■□□□□ 0.38
PDZRN3-210ENST00000492909 PLA2G12BQ9BX93 195 aa17.45■□□□□ 0.38
PDZRN3-210ENST00000492909 LNPKQ9C0E8 428 aa17.45■□□□□ 0.38
PDZRN3-210ENST00000492909 BCL2L12Q9HB09 334 aa17.45■□□□□ 0.38
PDZRN3-210ENST00000492909 LMBR1LQ6UX01 489 aa17.45■□□□□ 0.38
PDZRN3-210ENST00000492909 UTP14AQ9BVJ6 771 aaKnown RBP17.45■□□□□ 0.38
PDZRN3-210ENST00000492909 APBB1O00213 710 aa17.44■□□□□ 0.38
PDZRN3-210ENST00000492909 HSP90AB4PQ58FF6 505 aa17.44■□□□□ 0.38
PDZRN3-210ENST00000492909 SH3TC1Q8TE82 1336 aa17.44■□□□□ 0.38
PDZRN3-210ENST00000492909 RAB11FIP3O75154 756 aa17.43■□□□□ 0.38
PDZRN3-210ENST00000492909 TBC1D9BQ66K14 1250 aa17.43■□□□□ 0.38
PDZRN3-210ENST00000492909 SYNE4Q8N205 404 aa17.43■□□□□ 0.38
PDZRN3-210ENST00000492909 NOP58Q9Y2X3 529 aaKnown RBP17.43■□□□□ 0.38
PDZRN3-210ENST00000492909 COL24A1Q17RW2 1714 aa17.43■□□□□ 0.38
PDZRN3-210ENST00000492909 CASZ1Q86V15 1759 aa17.43■□□□□ 0.38
PDZRN3-210ENST00000492909 FAM177BA6PVY3 158 aa17.43■□□□□ 0.38
PDZRN3-210ENST00000492909 IRS4O14654 1257 aaPredicted RBP17.43■□□□□ 0.38
PDZRN3-210ENST00000492909 ZBTB7AO95365 584 aa17.43■□□□□ 0.38
PDZRN3-210ENST00000492909 LRRCC1Q9C099 1032 aa17.43■□□□□ 0.38
PDZRN3-210ENST00000492909 CHMP3Q9Y3E7 222 aa17.43■□□□□ 0.38
PDZRN3-210ENST00000492909 LAMB2P55268 1798 aa17.42■□□□□ 0.38
PDZRN3-210ENST00000492909 QSER1Q2KHR3 1735 aa17.42■□□□□ 0.38
PDZRN3-210ENST00000492909 NTSR2O95665 410 aa17.42■□□□□ 0.38
PDZRN3-210ENST00000492909 PDE4AP27815 886 aa17.42■□□□□ 0.38
PDZRN3-210ENST00000492909 BICDL1Q6ZP65 573 aa17.42■□□□□ 0.38
PDZRN3-210ENST00000492909 SETDB2Q96T68 719 aa17.42■□□□□ 0.38
PDZRN3-210ENST00000492909 PDE8AO60658 829 aa17.41■□□□□ 0.38
PDZRN3-210ENST00000492909 HSP90B1P14625 803 aaKnown RBP17.41■□□□□ 0.38
PDZRN3-210ENST00000492909 OS9Q13438 667 aaPredicted RBP17.41■□□□□ 0.38
PDZRN3-210ENST00000492909 PA2G4Q9UQ80 394 aaKnown RBP17.41■□□□□ 0.38
PDZRN3-210ENST00000492909 DDX60Q8IY21 1712 aaKnown RBP17.41■□□□□ 0.38
PDZRN3-210ENST00000492909 ANP32AP39687 249 aaKnown RBP17.4■□□□□ 0.38
PDZRN3-210ENST00000492909 RFX5P48382 616 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms