RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 MTHFSDQ2M296 383 aaKnown RBP24.48■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 KIF4BQ2VIQ3 1234 aa24.48■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 CD2BP2O95400 341 aaKnown RBP24.48■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 NUP133Q8WUM0 1156 aa24.48■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 ZNF518AQ6AHZ1 1483 aa24.48■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 AOX1Q06278 1338 aa24.48■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 GOLGA8BA8MQT2 603 aa24.47■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 CREB3L3Q68CJ9 461 aa24.47■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.47■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 CNNM3Q8NE01 707 aa24.47■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 IQCEQ6IPM2 695 aa24.47■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 AOPEPQ8N6M6 819 aa24.47■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 MRPS27Q92552 414 aaKnown RBP24.46■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 TRERF1Q96PN7 1200 aa24.46■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 NMIQ13287 307 aaPredicted RBP24.46■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 CCDC148Q8NFR7 591 aa24.46■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 PDE4CQ08493 712 aa24.46■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 G2E3Q7L622 706 aa24.46■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 CHPF2Q9P2E5 772 aa24.46■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.46■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 V9GYY5 206 aaPredicted RBP24.46■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 SNX14Q9Y5W7 946 aa24.46■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 PLXNC1O60486 1568 aa24.46■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 CHL1O00533 1208 aa24.45■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 RDXP35241 583 aaKnown RBP24.45■■□□□ 1.51
CHKB-CPT1B-203ENST00000492556 ANXA1P04083 346 aa24.45■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 PLEKHF1Q96S99 279 aa24.45■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 ALDH1L1O75891 902 aa24.45■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 KIF20AO95235 890 aa24.45■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 POLR3DP05423 398 aaPredicted RBP24.45■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 POTEB2H3BUK9 544 aa24.44■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 ORC3Q9UBD5 711 aaPredicted RBP24.44■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 CPA1P15085 419 aa24.44■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 MAPK8IP2Q13387 824 aaPredicted RBP24.44■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 AKAP2Q9Y2D5 859 aa24.44■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 USP16Q9Y5T5 823 aa24.44■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 KIAA0754O94854 1291 aa24.44■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 CCDC181Q5TID7 509 aa24.44■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 Q6ZUG5 572 aa24.44■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 DNAI1Q9UI46 699 aa24.44■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 GNG11P61952 73 aa24.43■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 IGSF3O75054 1194 aa24.43■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 KCNG4Q8TDN1 519 aa24.43■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 TTC37Q6PGP7 1564 aa24.43■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 SGSM2O43147 1006 aa24.43■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 YTHDC2Q9H6S0 1430 aaKnown RBP24.43■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 GOLIM4O00461 696 aa24.42■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 RAD50Q92878 1312 aa24.42■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 CRACR2AQ9BSW2 395 aa24.42■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 ZNF213O14771 459 aa24.42■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 FAM193AP78312 1265 aa24.42■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 SRRTQ9BXP5 876 aaKnown RBP24.42■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 UBASH3AP57075 661 aa24.42■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 SYTL4Q96C24 671 aaPredicted RBP24.42■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 TTC21AQ8NDW8 1320 aa24.41■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 FOXO3O43524 673 aa24.41■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 UBAC1Q9BSL1 405 aa24.41■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 IDH1O75874 414 aaKnown RBP24.41■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 HSPA4P34932 840 aa24.41■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 ISM2Q6H9L7 571 aa24.41■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 LRRC2Q9BYS8 371 aa24.41■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 TMX1Q9H3N1 280 aa24.41■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 MAP9Q49MG5 647 aa24.41■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 TXLNBQ8N3L3 684 aa24.41■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 DEF6Q9H4E7 631 aa24.41■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 PPFIA3O75145 1194 aa24.4■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 KLHL10Q6JEL2 608 aa24.4■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 EPS15P42566 896 aa24.4■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 ATF3P18847 181 aa24.4■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 U2AF2P26368 475 aaKnown RBP eCLIP24.4■■□□□ 1.51e-6■■□□□ 13.5
CHKB-CPT1B-203ENST00000492556 KIAA1328Q86T90 577 aa24.4■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 AIDAQ96BJ3 306 aa24.4■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 ATP10AO60312 1499 aa24.4■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 A0A087WZG4 1122 aa24.39■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 USP8P40818 1118 aa24.39■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 TDO2P48775 406 aa24.39■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 CCDC102BQ68D86 513 aa24.39■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 MCM3P25205 808 aa24.39■■□□□ 1.5
CHKB-CPT1B-203ENST00000492556 PA2G4Q9UQ80 394 aaKnown RBP24.38■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 TARBP1Q13395 1621 aaKnown RBP24.38■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 SYKP43405 635 aa24.38■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 ERO1AQ96HE7 468 aa24.38■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 BCL2L12Q9HB09 334 aa24.38■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 ZNF75DP51815 510 aa24.38■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 MCMDC2Q4G0Z9 681 aa24.38■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 LUC7LQ9NQ29 371 aaKnown RBP24.38■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 SSH2Q76I76 1423 aa24.38■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 CLSTN2Q9H4D0 955 aa24.38■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 ARFGAP3Q9NP61 516 aa24.38■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 AMOTL2Q9Y2J4 779 aa24.38■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 PLA2R1Q13018 1463 aa24.37■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 TRPM1Q7Z4N2 1603 aa24.37■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 GRM8O00222 908 aa24.37■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 LMAN1P49257 510 aa24.37■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 CCDC12Q8WUD4 166 aaPredicted RBP24.37■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 CPLX3Q8WVH0 158 aa24.37■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 CBX8Q9HC52 389 aa24.37■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 ATP7AQ04656 1500 aa24.37■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 KSR2Q6VAB6 950 aa24.37■■□□□ 1.49
CHKB-CPT1B-203ENST00000492556 DDX46Q7L014 1031 aaKnown RBP24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms