RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 ZNF771Q7L3S4 317 aaPredicted RBP22.99■■□□□ 1.27
SNAPC3-206ENST00000490969 VPS37CA5D8V6 355 aaPredicted RBP22.99■■□□□ 1.27
SNAPC3-206ENST00000490969 DTNBO60941 627 aa22.99■■□□□ 1.27
SNAPC3-206ENST00000490969 NUP62CLQ9H1M0 184 aa22.99■■□□□ 1.27
SNAPC3-206ENST00000490969 TAF3Q5VWG9 929 aa22.98■■□□□ 1.27
SNAPC3-206ENST00000490969 TNNT1P13805 278 aa22.98■■□□□ 1.27
SNAPC3-206ENST00000490969 GABPB1Q06547 395 aaPredicted RBP22.98■■□□□ 1.27
SNAPC3-206ENST00000490969 ANKRD24Q8TF21 1146 aa22.98■■□□□ 1.27
SNAPC3-206ENST00000490969 CGNQ9P2M7 1197 aaKnown RBP22.98■■□□□ 1.27
SNAPC3-206ENST00000490969 PHRF1Q9P1Y6 1649 aaKnown RBP22.97■■□□□ 1.27
SNAPC3-206ENST00000490969 CHRNA2Q15822 529 aa22.97■■□□□ 1.27
SNAPC3-206ENST00000490969 SPATA31A3Q5VYP0 1347 aa22.97■■□□□ 1.27
SNAPC3-206ENST00000490969 CAMK4Q16566 473 aa22.97■■□□□ 1.27
SNAPC3-206ENST00000490969 TTC6Q86TZ1 520 aa22.97■■□□□ 1.27
SNAPC3-206ENST00000490969 DRC7Q8IY82 874 aa22.97■■□□□ 1.27
SNAPC3-206ENST00000490969 DDX41Q9UJV9 622 aaKnown RBP22.97■■□□□ 1.27
SNAPC3-206ENST00000490969 CNTROBQ8N137 903 aa22.96■■□□□ 1.27
SNAPC3-206ENST00000490969 SSH3Q8TE77 659 aa22.96■■□□□ 1.27
SNAPC3-206ENST00000490969 ZSCAN31Q96LW9 406 aaPredicted RBP22.96■■□□□ 1.27
SNAPC3-206ENST00000490969 NRBP1Q9UHY1 535 aa22.96■■□□□ 1.27
SNAPC3-206ENST00000490969 SPG7Q9UQ90 795 aa22.96■■□□□ 1.27
SNAPC3-206ENST00000490969 CHMP3Q9Y3E7 222 aa22.96■■□□□ 1.27
SNAPC3-206ENST00000490969 PAXBP1Q9Y5B6 917 aa22.96■■□□□ 1.27
SNAPC3-206ENST00000490969 LIG1P18858 919 aa22.96■■□□□ 1.27
SNAPC3-206ENST00000490969 ZSCAN25Q6NSZ9 544 aa22.96■■□□□ 1.27
SNAPC3-206ENST00000490969 CWC27Q6UX04 472 aaKnown RBP22.96■■□□□ 1.27
SNAPC3-206ENST00000490969 IL17REQ8NFR9 667 aa22.96■■□□□ 1.27
SNAPC3-206ENST00000490969 CBX8Q9HC52 389 aa22.96■■□□□ 1.27
SNAPC3-206ENST00000490969 SH2B1Q9NRF2 756 aaPredicted RBP22.96■■□□□ 1.27
SNAPC3-206ENST00000490969 TNS3Q68CZ2 1445 aa22.95■■□□□ 1.26
SNAPC3-206ENST00000490969 RAB11FIP3O75154 756 aa22.95■■□□□ 1.26
SNAPC3-206ENST00000490969 VPS53Q5VIR6 699 aa22.95■■□□□ 1.26
SNAPC3-206ENST00000490969 PDRG1Q9NUG6 133 aa22.95■■□□□ 1.26
SNAPC3-206ENST00000490969 KRT85P78386 507 aa22.95■■□□□ 1.26
SNAPC3-206ENST00000490969 CCDC112Q8NEF3 446 aa22.95■■□□□ 1.26
SNAPC3-206ENST00000490969 USP44Q9H0E7 712 aa22.95■■□□□ 1.26
SNAPC3-206ENST00000490969 UBTFL1P0CB47 393 aaPredicted RBP22.94■■□□□ 1.26
SNAPC3-206ENST00000490969 ZNF75DP51815 510 aa22.94■■□□□ 1.26
SNAPC3-206ENST00000490969 NAA30Q147X3 362 aaPredicted RBP22.94■■□□□ 1.26
SNAPC3-206ENST00000490969 ANO6Q4KMQ2 910 aa22.94■■□□□ 1.26
SNAPC3-206ENST00000490969 SURF6O75683 361 aaKnown RBP22.93■■□□□ 1.26
SNAPC3-206ENST00000490969 ST3GAL1Q11201 340 aa22.93■■□□□ 1.26
SNAPC3-206ENST00000490969 CCDC30Q5VVM6 783 aa22.93■■□□□ 1.26
SNAPC3-206ENST00000490969 PLA2G4DQ86XP0 818 aa22.93■■□□□ 1.26
SNAPC3-206ENST00000490969 RHPN1Q8TCX5 695 aa22.93■■□□□ 1.26
SNAPC3-206ENST00000490969 TRIM5Q9C035 493 aa22.93■■□□□ 1.26
SNAPC3-206ENST00000490969 ELP1O95163 1332 aa22.93■■□□□ 1.26
SNAPC3-206ENST00000490969 FAM208AQ9UK61 1670 aaKnown RBP22.93■■□□□ 1.26
SNAPC3-206ENST00000490969 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.93■■□□□ 1.26
SNAPC3-206ENST00000490969 CKAP2LQ8IYA6 745 aa22.93■■□□□ 1.26
SNAPC3-206ENST00000490969 JAKMIP1Q96N16 626 aaKnown RBP22.93■■□□□ 1.26
SNAPC3-206ENST00000490969 TNMDQ9H2S6 317 aa22.92■■□□□ 1.26
SNAPC3-206ENST00000490969 FGD1P98174 961 aa22.92■■□□□ 1.26
SNAPC3-206ENST00000490969 ADCK5Q3MIX3 580 aa22.92■■□□□ 1.26
SNAPC3-206ENST00000490969 MORC2Q9Y6X9 1032 aaPredicted RBP22.92■■□□□ 1.26
SNAPC3-206ENST00000490969 GNAT3A8MTJ3 354 aa22.91■■□□□ 1.26
SNAPC3-206ENST00000490969 NECTIN2Q92692 538 aa22.91■■□□□ 1.26
SNAPC3-206ENST00000490969 ME3Q16798 604 aa22.91■■□□□ 1.26
SNAPC3-206ENST00000490969 CYP46A1Q9Y6A2 500 aa22.91■■□□□ 1.26
SNAPC3-206ENST00000490969 N4BP2Q86UW6 1770 aaPredicted RBP22.91■■□□□ 1.26
SNAPC3-206ENST00000490969 TPD52L1Q16890 204 aaPredicted RBP22.9■■□□□ 1.26
SNAPC3-206ENST00000490969 PPP1R42Q7Z4L9 355 aa22.9■■□□□ 1.26
SNAPC3-206ENST00000490969 KIF18AQ8NI77 898 aa22.9■■□□□ 1.26
SNAPC3-206ENST00000490969 ZSWIM6Q9HCJ5 1215 aa22.9■■□□□ 1.26
SNAPC3-206ENST00000490969 DACT1Q9NYF0 836 aa22.9■■□□□ 1.26
SNAPC3-206ENST00000490969 ERBB3P21860 1342 aa22.9■■□□□ 1.26
SNAPC3-206ENST00000490969 SLFN14P0C7P3 912 aa22.9■■□□□ 1.26
SNAPC3-206ENST00000490969 LARP1BQ659C4 914 aaKnown RBP22.9■■□□□ 1.26
SNAPC3-206ENST00000490969 TDRD7Q8NHU6 1098 aaKnown RBP22.9■■□□□ 1.26
SNAPC3-206ENST00000490969 LGR6Q9HBX8 967 aa22.9■■□□□ 1.26
SNAPC3-206ENST00000490969 POLA2Q14181 598 aa22.89■■□□□ 1.26
SNAPC3-206ENST00000490969 PRPF40BQ6NWY9 871 aaKnown RBP22.89■■□□□ 1.26
SNAPC3-206ENST00000490969 FERMT3Q86UX7 667 aa22.89■■□□□ 1.26
SNAPC3-206ENST00000490969 NECAB1Q8N987 351 aa22.89■■□□□ 1.26
SNAPC3-206ENST00000490969 TM6SF1Q9BZW5 370 aa22.89■■□□□ 1.26
SNAPC3-206ENST00000490969 CCDC171Q6TFL3 1326 aa22.89■■□□□ 1.25
SNAPC3-206ENST00000490969 CDC37L1Q7L3B6 337 aa22.89■■□□□ 1.25
SNAPC3-206ENST00000490969 CACTINQ8WUQ7 758 aaKnown RBP22.89■■□□□ 1.25
SNAPC3-206ENST00000490969 KIF1BPQ96EK5 621 aa22.89■■□□□ 1.25
SNAPC3-206ENST00000490969 PXDNLA1KZ92 1463 aa22.88■■□□□ 1.25
SNAPC3-206ENST00000490969 PTH1RQ03431 593 aa22.88■■□□□ 1.25
SNAPC3-206ENST00000490969 FAM173BQ6P4H8 233 aa22.88■■□□□ 1.25
SNAPC3-206ENST00000490969 CRYBG1Q9Y4K1 1723 aa22.88■■□□□ 1.25
SNAPC3-206ENST00000490969 SOS2Q07890 1332 aaPredicted RBP22.88■■□□□ 1.25
SNAPC3-206ENST00000490969 RBM43Q6ZSC3 357 aaKnown RBP22.88■■□□□ 1.25
SNAPC3-206ENST00000490969 CLIP2Q9UDT6 1046 aa22.88■■□□□ 1.25
SNAPC3-206ENST00000490969 MAP3K5Q99683 1374 aa22.88■■□□□ 1.25
SNAPC3-206ENST00000490969 DDX19AQ9NUU7 478 aaKnown RBP22.87■■□□□ 1.25
SNAPC3-206ENST00000490969 COL18A1P39060 1754 aa22.87■■□□□ 1.25
SNAPC3-206ENST00000490969 PDIA4P13667 645 aaKnown RBP22.87■■□□□ 1.25
SNAPC3-206ENST00000490969 CEP135Q66GS9 1140 aa22.87■■□□□ 1.25
SNAPC3-206ENST00000490969 RUFY2Q8WXA3 655 aa22.87■■□□□ 1.25
SNAPC3-206ENST00000490969 GOLGA6L4A6NEF3 574 aa22.86■■□□□ 1.25
SNAPC3-206ENST00000490969 KCNB2Q92953 911 aa22.86■■□□□ 1.25
SNAPC3-206ENST00000490969 CLSTN2Q9H4D0 955 aa22.86■■□□□ 1.25
SNAPC3-206ENST00000490969 CACNA1FO60840 1977 aa22.86■■□□□ 1.25
SNAPC3-206ENST00000490969 CCDC144BQ3MJ40 725 aa22.86■■□□□ 1.25
SNAPC3-206ENST00000490969 CCDC144CPQ8IYA2 1237 aa22.86■■□□□ 1.25
SNAPC3-206ENST00000490969 ZNF592Q92610 1267 aa22.85■■□□□ 1.25
SNAPC3-206ENST00000490969 SCAND2PQ9GZW5 306 aaPredicted RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms