RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 MRVI1Q9Y6F6 885 aa13.08□□□□□ -0.32
CRNKL1-204ENST00000490910 CT47A1Q5JQC4 288 aaPredicted RBP13.08□□□□□ -0.32
CRNKL1-204ENST00000490910 ZBTB9Q96C00 473 aa13.08□□□□□ -0.32
CRNKL1-204ENST00000490910 RBM8AQ9Y5S9 174 aaKnown RBP13.08□□□□□ -0.32
CRNKL1-204ENST00000490910 CTIFO43310 598 aaKnown RBP13.08□□□□□ -0.32
CRNKL1-204ENST00000490910 KMT5BQ4FZB7 885 aa13.08□□□□□ -0.32
CRNKL1-204ENST00000490910 ISM2Q6H9L7 571 aa13.08□□□□□ -0.32
CRNKL1-204ENST00000490910 SIRT2Q8IXJ6 389 aa13.08□□□□□ -0.32
CRNKL1-204ENST00000490910 CCDC148Q8NFR7 591 aa13.08□□□□□ -0.32
CRNKL1-204ENST00000490910 MSH6P52701 1360 aa13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 MRFAP1L1Q96HT8 127 aa13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 IMPACTQ9P2X3 320 aa13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 MTMR6Q9Y217 621 aa13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 IBSPP21815 317 aaPredicted RBP13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 PPP2R3AQ06190 1150 aa13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 HDXQ7Z353 690 aa13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 PPP1R42Q7Z4L9 355 aa13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 GOLGA5Q8TBA6 731 aa13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 LEO1Q8WVC0 666 aaPredicted RBP13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 MRPS27Q92552 414 aaKnown RBP13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 EVI5LQ96CN4 794 aa13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 UTP14AQ9BVJ6 771 aaKnown RBP13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 TRAPPC8Q9Y2L5 1435 aa13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 CEP170Q5SW79 1584 aa13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 TTC6Q86TZ1 520 aa13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 TMEM87AQ8NBN3 555 aa13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 TDRD7Q8NHU6 1098 aaKnown RBP13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 PTPRTO14522 1441 aa13.07□□□□□ -0.32
CRNKL1-204ENST00000490910 FBLN1P23142 703 aa13.06□□□□□ -0.32
CRNKL1-204ENST00000490910 PHF23Q9BUL5 403 aaPredicted RBP13.06□□□□□ -0.32
CRNKL1-204ENST00000490910 KDM5AP29375 1690 aaKnown RBP13.06□□□□□ -0.32
CRNKL1-204ENST00000490910 EBAG9O00559 213 aa13.06□□□□□ -0.32
CRNKL1-204ENST00000490910 SLFN14P0C7P3 912 aa13.06□□□□□ -0.32
CRNKL1-204ENST00000490910 RAD51AP2Q09MP3 1159 aa13.06□□□□□ -0.32
CRNKL1-204ENST00000490910 NFXL1Q6ZNB6 911 aa13.06□□□□□ -0.32
CRNKL1-204ENST00000490910 RUFY3Q7L099 469 aa13.06□□□□□ -0.32
CRNKL1-204ENST00000490910 CEP112Q8N8E3 955 aa13.06□□□□□ -0.32
CRNKL1-204ENST00000490910 SSH2Q76I76 1423 aa13.06□□□□□ -0.32
CRNKL1-204ENST00000490910 BOLA2Q9H3K6 86 aa13.06□□□□□ -0.32
CRNKL1-204ENST00000490910 SGSM2O43147 1006 aa13.05□□□□□ -0.32
CRNKL1-204ENST00000490910 ETF1P62495 437 aaKnown RBP13.05□□□□□ -0.32
CRNKL1-204ENST00000490910 KRT24Q2M2I5 525 aa13.05□□□□□ -0.32
CRNKL1-204ENST00000490910 IQCEQ6IPM2 695 aa13.05□□□□□ -0.32
CRNKL1-204ENST00000490910 RRP15Q9Y3B9 282 aaKnown RBP13.05□□□□□ -0.32
CRNKL1-204ENST00000490910 PNMA6AP0CW24 399 aaPredicted RBP13.05□□□□□ -0.32
CRNKL1-204ENST00000490910 CLCN6P51797 869 aa13.05□□□□□ -0.32
CRNKL1-204ENST00000490910 SLFNL1Q499Z3 407 aa13.05□□□□□ -0.32
CRNKL1-204ENST00000490910 LMOD2Q6P5Q4 547 aa13.05□□□□□ -0.32
CRNKL1-204ENST00000490910 LARP1Q6PKG0 1096 aaKnown RBP13.05□□□□□ -0.32
CRNKL1-204ENST00000490910 NEUROD6Q96NK8 337 aa13.05□□□□□ -0.32
CRNKL1-204ENST00000490910 CTAGE15A4D2H0 777 aa13.05□□□□□ -0.32
CRNKL1-204ENST00000490910 CTAGE8P0CG41 777 aa13.05□□□□□ -0.32
CRNKL1-204ENST00000490910 CDC37L1Q7L3B6 337 aa13.05□□□□□ -0.32
CRNKL1-204ENST00000490910 CTAGE6Q86UF2 777 aa13.05□□□□□ -0.32
CRNKL1-204ENST00000490910 CTAGE4Q8IX94 777 aa13.05□□□□□ -0.32
CRNKL1-204ENST00000490910 PUS7Q96PZ0 661 aaKnown RBP13.05□□□□□ -0.32
CRNKL1-204ENST00000490910 KIF24Q5T7B8 1368 aa13.05□□□□□ -0.32
CRNKL1-204ENST00000490910 ATP2B1P20020 1258 aa13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 TDO2P48775 406 aa13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 KCNF1Q9H3M0 494 aa13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 HMG20BQ9P0W2 317 aa13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 MKRN1Q9UHC7 482 aaKnown RBP13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 MYO1CO00159 1063 aa13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 CLGNO14967 610 aa13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 CCT2P78371 535 aaKnown RBP13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 CPLX3Q8WVH0 158 aa13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 C8orf76Q96K31 380 aa13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 RAI14Q9P0K7 980 aa13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 TUBB4BP68371 445 aa13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 DNAJC21Q5F1R6 531 aaKnown RBP13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 MICALCLQ6ZW33 695 aa13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 GPR161Q8N6U8 529 aaKnown RBP13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 NEK1Q96PY6 1258 aa13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 MPHOSPH8Q99549 860 aa13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 PUF60Q9UHX1 559 aaKnown RBP13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 DUOX2Q9NRD8 1548 aa13.04□□□□□ -0.32
CRNKL1-204ENST00000490910 ATP8B1O43520 1251 aa13.03□□□□□ -0.32
CRNKL1-204ENST00000490910 NAP1L1P55209 391 aaKnown RBP13.03□□□□□ -0.32
CRNKL1-204ENST00000490910 EFCAB8A8MWE9 144 aa13.03□□□□□ -0.32
CRNKL1-204ENST00000490910 CDC25BP30305 580 aa13.03□□□□□ -0.32
CRNKL1-204ENST00000490910 PIP4K2AP48426 406 aaPredicted RBP13.03□□□□□ -0.32
CRNKL1-204ENST00000490910 FAM160A1Q05DH4 1040 aa13.03□□□□□ -0.32
CRNKL1-204ENST00000490910 WASHC4Q2M389 1173 aa13.03□□□□□ -0.32
CRNKL1-204ENST00000490910 ZNF518AQ6AHZ1 1483 aa13.03□□□□□ -0.32
CRNKL1-204ENST00000490910 RNF187Q5TA31 235 aaPredicted RBP13.03□□□□□ -0.32
CRNKL1-204ENST00000490910 RTL1A6NKG5 1358 aa13.03□□□□□ -0.32
CRNKL1-204ENST00000490910 TRPM1Q7Z4N2 1603 aa13.03□□□□□ -0.32
CRNKL1-204ENST00000490910 NR1I2O75469 434 aa13.02□□□□□ -0.32
CRNKL1-204ENST00000490910 HMGB1P09429 215 aaKnown RBP13.02□□□□□ -0.32
CRNKL1-204ENST00000490910 AIMP1Q12904 312 aaKnown RBP13.02□□□□□ -0.32
CRNKL1-204ENST00000490910 KARSQ15046 597 aaKnown RBP13.02□□□□□ -0.32
CRNKL1-204ENST00000490910 CREB3L3Q68CJ9 461 aa13.02□□□□□ -0.32
CRNKL1-204ENST00000490910 GOLGA6L10A6NI86 522 aa13.02□□□□□ -0.32
CRNKL1-204ENST00000490910 TUBBP07437 444 aa13.02□□□□□ -0.32
CRNKL1-204ENST00000490910 CCDC158Q5M9N0 1113 aa13.02□□□□□ -0.32
CRNKL1-204ENST00000490910 NME9Q86XW9 330 aa13.02□□□□□ -0.32
CRNKL1-204ENST00000490910 RNF216Q9NWF9 866 aaPredicted RBP13.02□□□□□ -0.32
CRNKL1-204ENST00000490910 RTEL1-TNFRSF6BF6WH68 1400 aa13.02□□□□□ -0.33
CRNKL1-204ENST00000490910 CCDC175P0C221 793 aa13.02□□□□□ -0.33
CRNKL1-204ENST00000490910 ICE2Q659A1 982 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms