RNA–Protein interactions for RNA: ENST00000490552.1

USP34-218, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 1,793 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-218ENST00000490552 NOP58Q9Y2X3 529 aaKnown RBP11.71□□□□□ -0.54
USP34-218ENST00000490552 GNPATO15228 680 aa11.7□□□□□ -0.54
USP34-218ENST00000490552 HLFQ16534 295 aa11.7□□□□□ -0.54
USP34-218ENST00000490552 KAZALD1Q96I82 304 aa11.7□□□□□ -0.54
USP34-218ENST00000490552 PLA2G12BQ9BX93 195 aa11.7□□□□□ -0.54
USP34-218ENST00000490552 LRRCC1Q9C099 1032 aa11.7□□□□□ -0.54
USP34-218ENST00000490552 NARFQ9UHQ1 456 aa11.7□□□□□ -0.54
USP34-218ENST00000490552 ANKRD36CQ5JPF3 1778 aa11.7□□□□□ -0.54
USP34-218ENST00000490552 MYH14Q7Z406 1995 aaKnown RBP11.7□□□□□ -0.54
USP34-218ENST00000490552 ZPR1O75312 459 aa11.69□□□□□ -0.54
USP34-218ENST00000490552 SURF6O75683 361 aaKnown RBP11.69□□□□□ -0.54
USP34-218ENST00000490552 KIF1BPQ96EK5 621 aa11.69□□□□□ -0.54
USP34-218ENST00000490552 LNPKQ9C0E8 428 aa11.69□□□□□ -0.54
USP34-218ENST00000490552 C4BP0C0L5 1744 aa11.69□□□□□ -0.54
USP34-218ENST00000490552 TRAPPC3LQ5T215 181 aa11.69□□□□□ -0.54
USP34-218ENST00000490552 TAF1LQ8IZX4 1826 aa11.68□□□□□ -0.54
USP34-218ENST00000490552 TXNRD1Q16881 649 aa11.68□□□□□ -0.54
USP34-218ENST00000490552 COPRSQ9NQ92 184 aa11.68□□□□□ -0.54
USP34-218ENST00000490552 TRMT112Q9UI30 125 aaKnown RBP11.68□□□□□ -0.54
USP34-218ENST00000490552 EXOC6BQ9Y2D4 811 aa11.68□□□□□ -0.54
USP34-218ENST00000490552 NUP98P52948 1817 aa11.68□□□□□ -0.54
USP34-218ENST00000490552 SH3TC1Q8TE82 1336 aa11.67□□□□□ -0.54
USP34-218ENST00000490552 APBA3O96018 575 aa11.67□□□□□ -0.54
USP34-218ENST00000490552 SSFA2P28290 1259 aa11.67□□□□□ -0.54
USP34-218ENST00000490552 RFC4P35249 363 aa11.67□□□□□ -0.54
USP34-218ENST00000490552 G3BP1Q13283 466 aaKnown RBP eCLIP11.67□□□□□ -0.54
USP34-218ENST00000490552 UTP14AQ9BVJ6 771 aaKnown RBP11.67□□□□□ -0.54
USP34-218ENST00000490552 LRRC4BQ9NT99 713 aa11.67□□□□□ -0.54
USP34-218ENST00000490552 FBXO3Q9UK99 471 aa11.67□□□□□ -0.54
USP34-218ENST00000490552 RGPD3A6NKT7 1758 aaPredicted RBP11.67□□□□□ -0.54
USP34-218ENST00000490552 BCORQ6W2J9 1755 aa11.67□□□□□ -0.54
USP34-218ENST00000490552 RGPD4Q7Z3J3 1758 aa11.67□□□□□ -0.54
USP34-218ENST00000490552 GPTP24298 496 aa11.67□□□□□ -0.54
USP34-218ENST00000490552 KCNQ4P56696 695 aa11.67□□□□□ -0.54
USP34-218ENST00000490552 FOXO4P98177 505 aa11.67□□□□□ -0.54
USP34-218ENST00000490552 OS9Q13438 667 aaPredicted RBP11.67□□□□□ -0.54
USP34-218ENST00000490552 FAM161AQ3B820 660 aa11.67□□□□□ -0.54
USP34-218ENST00000490552 LMBR1LQ6UX01 489 aa11.67□□□□□ -0.54
USP34-218ENST00000490552 NIP7Q9Y221 180 aaKnown RBP eCLIP11.67□□□□□ -0.54
USP34-218ENST00000490552 EIF5BO60841 1220 aaKnown RBP11.66□□□□□ -0.54
USP34-218ENST00000490552 PDE4AP27815 886 aa11.66□□□□□ -0.54
USP34-218ENST00000490552 FLAD1Q8NFF5 587 aa11.66□□□□□ -0.54
USP34-218ENST00000490552 RHPN1Q8TCX5 695 aa11.66□□□□□ -0.54
USP34-218ENST00000490552 ARHGEF1Q92888 912 aaKnown RBP11.66□□□□□ -0.54
USP34-218ENST00000490552 FAM89AQ96GI7 184 aa11.66□□□□□ -0.54
USP34-218ENST00000490552 NYXQ9GZU5 481 aa11.66□□□□□ -0.54
USP34-218ENST00000490552 SCN7AQ01118 1682 aa11.66□□□□□ -0.54
USP34-218ENST00000490552 UBN2Q6ZU65 1347 aa11.65□□□□□ -0.54
USP34-218ENST00000490552 IRS4O14654 1257 aaPredicted RBP11.65□□□□□ -0.54
USP34-218ENST00000490552 PDE8AO60658 829 aa11.65□□□□□ -0.54
USP34-218ENST00000490552 CSF1RP07333 972 aa11.65□□□□□ -0.54
USP34-218ENST00000490552 BMP2KLQ5H9B9 411 aa11.65□□□□□ -0.54
USP34-218ENST00000490552 EPHA10Q5JZY3 1008 aa11.65□□□□□ -0.54
USP34-218ENST00000490552 CLASRPQ8N2M8 674 aaKnown RBP11.65□□□□□ -0.54
USP34-218ENST00000490552 USP42Q9H9J4 1324 aaKnown RBP11.65□□□□□ -0.54
USP34-218ENST00000490552 CCDC57Q2TAC2 916 aa11.64□□□□□ -0.55
USP34-218ENST00000490552 SETDB2Q96T68 719 aa11.64□□□□□ -0.55
USP34-218ENST00000490552 OSBPL3Q9H4L5 887 aa11.64□□□□□ -0.55
USP34-218ENST00000490552 AOX1Q06278 1338 aa11.64□□□□□ -0.55
USP34-218ENST00000490552 APBB1O00213 710 aa11.64□□□□□ -0.55
USP34-218ENST00000490552 RFX5P48382 616 aaPredicted RBP11.64□□□□□ -0.55
USP34-218ENST00000490552 SF3B2Q13435 895 aaKnown RBP11.64□□□□□ -0.55
USP34-218ENST00000490552 SUSD4Q5VX71 490 aa11.64□□□□□ -0.55
USP34-218ENST00000490552 USPL1Q5W0Q7 1092 aa11.64□□□□□ -0.55
USP34-218ENST00000490552 SKAP1Q86WV1 359 aa11.64□□□□□ -0.55
USP34-218ENST00000490552 PLEKHM2Q8IWE5 1019 aa11.64□□□□□ -0.55
USP34-218ENST00000490552 CHMP3Q9Y3E7 222 aa11.64□□□□□ -0.55
USP34-218ENST00000490552 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.63□□□□□ -0.55
USP34-218ENST00000490552 CIAO1O76071 339 aa11.63□□□□□ -0.55
USP34-218ENST00000490552 NTSR2O95665 410 aa11.63□□□□□ -0.55
USP34-218ENST00000490552 CTSWP56202 376 aa11.63□□□□□ -0.55
USP34-218ENST00000490552 PTPN12Q05209 780 aaKnown RBP11.63□□□□□ -0.55
USP34-218ENST00000490552 IFIT5Q13325 482 aaKnown RBP11.63□□□□□ -0.55
USP34-218ENST00000490552 RTL5Q5HYW3 569 aaPredicted RBP11.63□□□□□ -0.55
USP34-218ENST00000490552 TPTE2Q6XPS3 522 aa11.63□□□□□ -0.55
USP34-218ENST00000490552 PROM2Q8N271 834 aa11.63□□□□□ -0.55
USP34-218ENST00000490552 JARID2Q92833 1246 aaPredicted RBP11.63□□□□□ -0.55
USP34-218ENST00000490552 BACH2Q9BYV9 841 aa11.63□□□□□ -0.55
USP34-218ENST00000490552 MX1P20591 662 aa11.62□□□□□ -0.55
USP34-218ENST00000490552 IL15P40933 162 aaPredicted RBP11.62□□□□□ -0.55
USP34-218ENST00000490552 GPATCH3Q96I76 525 aa11.62□□□□□ -0.55
USP34-218ENST00000490552 TNS1Q9HBL0 1735 aaKnown RBP11.62□□□□□ -0.55
USP34-218ENST00000490552 ANKRD18BA2A2Z9 1011 aa11.62□□□□□ -0.55
USP34-218ENST00000490552 SMARCA5O60264 1052 aaPredicted RBP11.62□□□□□ -0.55
USP34-218ENST00000490552 GTF2E1P29083 439 aaPredicted RBP11.62□□□□□ -0.55
USP34-218ENST00000490552 CCDC125Q86Z20 511 aa11.62□□□□□ -0.55
USP34-218ENST00000490552 TTLL11Q8NHH1 800 aa11.62□□□□□ -0.55
USP34-218ENST00000490552 BCL2L12Q9HB09 334 aa11.62□□□□□ -0.55
USP34-218ENST00000490552 STAP2Q9UGK3 403 aa11.62□□□□□ -0.55
USP34-218ENST00000490552 TTC41PQ6P2S7 1318 aa11.61□□□□□ -0.55
USP34-218ENST00000490552 CARMIL3Q8ND23 1372 aa11.61□□□□□ -0.55
USP34-218ENST00000490552 RTL9Q8NET4 1388 aa11.61□□□□□ -0.55
USP34-218ENST00000490552 EYA2O00167 538 aa11.61□□□□□ -0.55
USP34-218ENST00000490552 PHF14O94880 888 aa11.61□□□□□ -0.55
USP34-218ENST00000490552 IFIT2P09913 472 aaKnown RBP11.61□□□□□ -0.55
USP34-218ENST00000490552 PDE1AP54750 535 aa11.61□□□□□ -0.55
USP34-218ENST00000490552 CCDC152Q4G0S7 254 aa11.61□□□□□ -0.55
USP34-218ENST00000490552 TAF7LQ5H9L4 462 aa11.61□□□□□ -0.55
USP34-218ENST00000490552 SLC10A5Q5PT55 438 aa11.61□□□□□ -0.55
USP34-218ENST00000490552 TTC22Q5TAA0 569 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 319.3 ms