RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ANKRD13DQ6ZTN6 518 aa22.55■■□□□ 1.2
SEC13-218ENST00000490283 WWC1Q8IX03 1113 aa22.55■■□□□ 1.2
SEC13-218ENST00000490283 NLRP3Q96P20 1036 aa22.55■■□□□ 1.2
SEC13-218ENST00000490283 NMRK2Q9NPI5 230 aa22.55■■□□□ 1.2
SEC13-218ENST00000490283 NLRP10Q86W26 655 aa22.54■■□□□ 1.2
SEC13-218ENST00000490283 RBM17Q96I25 401 aaKnown RBP22.54■■□□□ 1.2
SEC13-218ENST00000490283 SLX4Q8IY92 1834 aa22.53■■□□□ 1.2
SEC13-218ENST00000490283 GOLGA2Q08379 1002 aa22.53■■□□□ 1.2
SEC13-218ENST00000490283 CCDC30Q5VVM6 783 aa22.53■■□□□ 1.2
SEC13-218ENST00000490283 RTKN2Q8IZC4 609 aa22.53■■□□□ 1.2
SEC13-218ENST00000490283 C7orf43Q8WVR3 580 aa22.53■■□□□ 1.2
SEC13-218ENST00000490283 TRMT112Q9UI30 125 aaKnown RBP22.53■■□□□ 1.2
SEC13-218ENST00000490283 ARFGEF2Q9Y6D5 1785 aa22.53■■□□□ 1.2
SEC13-218ENST00000490283 SBF1O95248 1867 aa22.52■■□□□ 1.2
SEC13-218ENST00000490283 TOMM70O94826 608 aa22.52■■□□□ 1.2
SEC13-218ENST00000490283 PRELPP51888 382 aa22.52■■□□□ 1.2
SEC13-218ENST00000490283 DPY19L2Q6NUT2 758 aa22.52■■□□□ 1.2
SEC13-218ENST00000490283 TMX4Q9H1E5 349 aaPredicted RBP22.52■■□□□ 1.2
SEC13-218ENST00000490283 IL16Q14005 1332 aa22.52■■□□□ 1.2
SEC13-218ENST00000490283 GLTPD2A6NH11 291 aa22.51■■□□□ 1.19
SEC13-218ENST00000490283 HOXA10P31260 410 aaPredicted RBP22.51■■□□□ 1.19
SEC13-218ENST00000490283 CC2D2BQ6DHV5 1058 aa22.51■■□□□ 1.19
SEC13-218ENST00000490283 RIC3Q7Z5B4 369 aa22.51■■□□□ 1.19
SEC13-218ENST00000490283 FAM9BQ8IZU0 186 aa22.51■■□□□ 1.19
SEC13-218ENST00000490283 C8orf58Q8NAV2 365 aa22.51■■□□□ 1.19
SEC13-218ENST00000490283 TNRC6CQ9HCJ0 1690 aaKnown RBP22.51■■□□□ 1.19
SEC13-218ENST00000490283 SH3TC1Q8TE82 1336 aa22.51■■□□□ 1.19
SEC13-218ENST00000490283 CACNA1SQ13698 1873 aa22.5■■□□□ 1.19
SEC13-218ENST00000490283 FKBP4Q02790 459 aaKnown RBP eCLIP22.5■■□□□ 1.19
SEC13-218ENST00000490283 SLC10A5Q5PT55 438 aa22.5■■□□□ 1.19
SEC13-218ENST00000490283 TSR2Q969E8 191 aaKnown RBP22.5■■□□□ 1.19
SEC13-218ENST00000490283 CRAMP1Q96RY5 1269 aa22.5■■□□□ 1.19
SEC13-218ENST00000490283 DDX58O95786 925 aaKnown RBP22.49■■□□□ 1.19
SEC13-218ENST00000490283 STK31Q9BXU1 1019 aa22.49■■□□□ 1.19
SEC13-218ENST00000490283 RRAGCQ9HB90 399 aa22.49■■□□□ 1.19
SEC13-218ENST00000490283 SALL2Q9Y467 1007 aaPredicted RBP22.49■■□□□ 1.19
SEC13-218ENST00000490283 FER1L6Q2WGJ9 1857 aa22.48■■□□□ 1.19
SEC13-218ENST00000490283 GRIPAP1Q4V328 841 aa22.48■■□□□ 1.19
SEC13-218ENST00000490283 PPEF1O14829 653 aaPredicted RBP22.47■■□□□ 1.19
SEC13-218ENST00000490283 ANKRD36CQ5JPF3 1778 aa22.47■■□□□ 1.19
SEC13-218ENST00000490283 TIAM2Q8IVF5 1701 aa22.46■■□□□ 1.19
SEC13-218ENST00000490283 ATP5J2-PTCD1G3V325 749 aa22.46■■□□□ 1.19
SEC13-218ENST00000490283 HCLS1P14317 486 aaPredicted RBP22.46■■□□□ 1.19
SEC13-218ENST00000490283 TWISTNBQ3B726 338 aaPredicted RBP22.46■■□□□ 1.19
SEC13-218ENST00000490283 WDR63Q8IWG1 891 aa22.46■■□□□ 1.19
SEC13-218ENST00000490283 ISCA1Q9BUE6 129 aa22.46■■□□□ 1.19
SEC13-218ENST00000490283 PHAXQ9H814 394 aaKnown RBP22.46■■□□□ 1.19
SEC13-218ENST00000490283 VEGFAP15692 232 aaPredicted RBP22.45■■□□□ 1.18
SEC13-218ENST00000490283 HSPA6P17066 643 aa22.45■■□□□ 1.18
SEC13-218ENST00000490283 OLFM4Q6UX06 510 aa22.45■■□□□ 1.18
SEC13-218ENST00000490283 C3orf67Q6ZVT6 689 aa22.45■■□□□ 1.18
SEC13-218ENST00000490283 TSPYL6Q8N831 410 aa22.45■■□□□ 1.18
SEC13-218ENST00000490283 RBM46Q8TBY0 533 aaKnown RBP22.45■■□□□ 1.18
SEC13-218ENST00000490283 ZNF277Q9NRM2 450 aaPredicted RBP22.45■■□□□ 1.18
SEC13-218ENST00000490283 DDX46Q7L014 1031 aaKnown RBP22.44■■□□□ 1.18
SEC13-218ENST00000490283 SYNE4Q8N205 404 aa22.44■■□□□ 1.18
SEC13-218ENST00000490283 PSMD1Q99460 953 aa22.44■■□□□ 1.18
SEC13-218ENST00000490283 TCERG1O14776 1098 aaKnown RBP22.43■■□□□ 1.18
SEC13-218ENST00000490283 HSP90B1P14625 803 aaKnown RBP22.43■■□□□ 1.18
SEC13-218ENST00000490283 IARSP41252 1262 aaKnown RBP22.43■■□□□ 1.18
SEC13-218ENST00000490283 TRIM28Q13263 835 aaKnown RBP22.43■■□□□ 1.18
SEC13-218ENST00000490283 ABCC4O15439 1325 aa22.42■■□□□ 1.18
SEC13-218ENST00000490283 ZNF428Q96B54 188 aa22.42■■□□□ 1.18
SEC13-218ENST00000490283 FAM89AQ96GI7 184 aa22.42■■□□□ 1.18
SEC13-218ENST00000490283 MYD88Q99836 296 aa22.42■■□□□ 1.18
SEC13-218ENST00000490283 CCDC88AQ3V6T2 1871 aa22.41■■□□□ 1.18
SEC13-218ENST00000490283 FANCIQ9NVI1 1328 aa22.41■■□□□ 1.18
SEC13-218ENST00000490283 BBOX1O75936 387 aa22.41■■□□□ 1.18
SEC13-218ENST00000490283 FSTL1Q12841 308 aa22.41■■□□□ 1.18
SEC13-218ENST00000490283 JDP2Q8WYK2 163 aa22.41■■□□□ 1.18
SEC13-218ENST00000490283 MYH16Q9H6N6 1097 aa22.4■■□□□ 1.18
SEC13-218ENST00000490283 ATP6V0A2Q9Y487 856 aa22.4■■□□□ 1.18
SEC13-218ENST00000490283 GRAPQ13588 217 aa22.39■■□□□ 1.17
SEC13-218ENST00000490283 RTL5Q5HYW3 569 aaPredicted RBP22.39■■□□□ 1.17
SEC13-218ENST00000490283 CCDC191Q8NCU4 936 aa22.39■■□□□ 1.17
SEC13-218ENST00000490283 SMC1BQ8NDV3 1235 aa22.39■■□□□ 1.17
SEC13-218ENST00000490283 GRAPLQ8TC17 118 aaPredicted RBP22.39■■□□□ 1.17
SEC13-218ENST00000490283 METTL22Q9BUU2 404 aaPredicted RBP22.39■■□□□ 1.17
SEC13-218ENST00000490283 DICER1Q9UPY3 1922 aaKnown RBP22.39■■□□□ 1.17
SEC13-218ENST00000490283 IRS4O14654 1257 aaPredicted RBP22.38■■□□□ 1.17
SEC13-218ENST00000490283 NEXNQ0ZGT2 675 aa22.38■■□□□ 1.17
SEC13-218ENST00000490283 TMC4Q7Z404 712 aa22.38■■□□□ 1.17
SEC13-218ENST00000490283 ZBTB38Q8NAP3 1195 aaPredicted RBP22.38■■□□□ 1.17
SEC13-218ENST00000490283 CWC25Q9NXE8 425 aaPredicted RBP22.38■■□□□ 1.17
SEC13-218ENST00000490283 MAP3K2Q9Y2U5 619 aa22.38■■□□□ 1.17
SEC13-218ENST00000490283 DDNO94850 711 aaPredicted RBP22.37■■□□□ 1.17
SEC13-218ENST00000490283 SLC4A2P04920 1241 aa22.37■■□□□ 1.17
SEC13-218ENST00000490283 KSR2Q6VAB6 950 aa22.37■■□□□ 1.17
SEC13-218ENST00000490283 LARGE2Q8N3Y3 721 aa22.37■■□□□ 1.17
SEC13-218ENST00000490283 SUPT20HQ8NEM7 779 aa22.37■■□□□ 1.17
SEC13-218ENST00000490283 IQCA1LA6NCM1 817 aa22.36■■□□□ 1.17
SEC13-218ENST00000490283 APLP1P51693 650 aa22.36■■□□□ 1.17
SEC13-218ENST00000490283 SP8Q8IXZ3 490 aa22.36■■□□□ 1.17
SEC13-218ENST00000490283 SNED1Q8TER0 1413 aa22.36■■□□□ 1.17
SEC13-218ENST00000490283 PI4KAP2A4QPH2 592 aa22.35■■□□□ 1.17
SEC13-218ENST00000490283 EIF6P56537 245 aaKnown RBP22.35■■□□□ 1.17
SEC13-218ENST00000490283 SF3B3Q15393 1217 aaKnown RBP22.35■■□□□ 1.17
SEC13-218ENST00000490283 DPP8Q6V1X1 898 aaPredicted RBP22.35■■□□□ 1.17
SEC13-218ENST00000490283 PI4KAP1Q8N8J0 262 aa22.35■■□□□ 1.17
SEC13-218ENST00000490283 WDR90Q96KV7 1748 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms