RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 HOXA10P31260 410 aaPredicted RBP20.95■□□□□ 0.94
PLOD3-216ENST00000489927 EPHX2P34913 555 aa20.95■□□□□ 0.94
PLOD3-216ENST00000489927 ZNF34Q8IZ26 560 aa20.95■□□□□ 0.94
PLOD3-216ENST00000489927 CNTNAP1P78357 1384 aa20.95■□□□□ 0.94
PLOD3-216ENST00000489927 CC2D2BQ6DHV5 1058 aa20.94■□□□□ 0.94
PLOD3-216ENST00000489927 GPC2Q8N158 579 aa20.94■□□□□ 0.94
PLOD3-216ENST00000489927 JDP2Q8WYK2 163 aa20.94■□□□□ 0.94
PLOD3-216ENST00000489927 PNNQ9H307 717 aaKnown RBP20.94■□□□□ 0.94
PLOD3-216ENST00000489927 CLEC11AQ9Y240 323 aa20.94■□□□□ 0.94
PLOD3-216ENST00000489927 COL4A5P29400 1685 aa20.93■□□□□ 0.94
PLOD3-216ENST00000489927 ADAMTSL1Q8N6G6 1762 aa20.93■□□□□ 0.94
PLOD3-216ENST00000489927 NTSR2O95665 410 aa20.93■□□□□ 0.94
PLOD3-216ENST00000489927 SLC51AQ86UW1 340 aa20.93■□□□□ 0.94
PLOD3-216ENST00000489927 ERBB4Q15303 1308 aa20.93■□□□□ 0.94
PLOD3-216ENST00000489927 TMEM88BA6NKF7 163 aa20.92■□□□□ 0.94
PLOD3-216ENST00000489927 GIGYF2Q6Y7W6 1299 aaKnown RBP20.92■□□□□ 0.94
PLOD3-216ENST00000489927 C3orf67Q6ZVT6 689 aa20.92■□□□□ 0.94
PLOD3-216ENST00000489927 PNMA8AQ86V59 439 aaPredicted RBP20.92■□□□□ 0.94
PLOD3-216ENST00000489927 TSPYL4Q9UJ04 414 aa20.92■□□□□ 0.94
PLOD3-216ENST00000489927 MAP1SQ66K74 1059 aaPredicted RBP20.91■□□□□ 0.94
PLOD3-216ENST00000489927 LRP10Q7Z4F1 713 aa20.91■□□□□ 0.94
PLOD3-216ENST00000489927 RBM17Q96I25 401 aaKnown RBP20.91■□□□□ 0.94
PLOD3-216ENST00000489927 TCERG1O14776 1098 aaKnown RBP20.9■□□□□ 0.94
PLOD3-216ENST00000489927 PPEF1O14829 653 aaPredicted RBP20.9■□□□□ 0.94
PLOD3-216ENST00000489927 CRAMP1Q96RY5 1269 aa20.9■□□□□ 0.94
PLOD3-216ENST00000489927 GJA3Q9Y6H8 435 aa20.9■□□□□ 0.94
PLOD3-216ENST00000489927 EIF2S2P20042 333 aaKnown RBP20.89■□□□□ 0.93
PLOD3-216ENST00000489927 EIF6P56537 245 aaKnown RBP20.89■□□□□ 0.93
PLOD3-216ENST00000489927 RIPK4P57078 832 aa20.89■□□□□ 0.93
PLOD3-216ENST00000489927 PDIA6Q15084 440 aa20.89■□□□□ 0.93
PLOD3-216ENST00000489927 GRIPAP1Q4V328 841 aa20.89■□□□□ 0.93
PLOD3-216ENST00000489927 PPP1R42Q7Z4L9 355 aa20.89■□□□□ 0.93
PLOD3-216ENST00000489927 CNTROBQ8N137 903 aa20.89■□□□□ 0.93
PLOD3-216ENST00000489927 VEGFBP49765 207 aa20.88■□□□□ 0.93
PLOD3-216ENST00000489927 PROSER3Q2NL68 480 aa20.88■□□□□ 0.93
PLOD3-216ENST00000489927 PARP10Q53GL7 1025 aa20.88■□□□□ 0.93
PLOD3-216ENST00000489927 LARGE2Q8N3Y3 721 aa20.88■□□□□ 0.93
PLOD3-216ENST00000489927 FOXN1O15353 648 aa20.87■□□□□ 0.93
PLOD3-216ENST00000489927 ANXA1P04083 346 aa20.87■□□□□ 0.93
PLOD3-216ENST00000489927 NLRP3Q96P20 1036 aa20.87■□□□□ 0.93
PLOD3-216ENST00000489927 UTP14AQ9BVJ6 771 aaKnown RBP20.86■□□□□ 0.93
PLOD3-216ENST00000489927 LTBP1Q14766 1721 aa20.86■□□□□ 0.93
PLOD3-216ENST00000489927 LMOD1P29536 600 aaPredicted RBP20.85■□□□□ 0.93
PLOD3-216ENST00000489927 SCNN1DP51172 638 aa20.85■□□□□ 0.93
PLOD3-216ENST00000489927 SLC10A5Q5PT55 438 aa20.85■□□□□ 0.93
PLOD3-216ENST00000489927 BABAM1Q9NWV8 329 aa20.85■□□□□ 0.93
PLOD3-216ENST00000489927 TMPOP42166 694 aaKnown RBP20.84■□□□□ 0.93
PLOD3-216ENST00000489927 ATP6V0A2Q9Y487 856 aa20.84■□□□□ 0.93
PLOD3-216ENST00000489927 ABCC4O15439 1325 aa20.83■□□□□ 0.93
PLOD3-216ENST00000489927 RASSF10A6NK89 507 aa20.83■□□□□ 0.93
PLOD3-216ENST00000489927 EPS15P42566 896 aa20.83■□□□□ 0.93
PLOD3-216ENST00000489927 RALBP1Q15311 655 aa20.83■□□□□ 0.93
PLOD3-216ENST00000489927 NIM1KQ8IY84 436 aa20.83■□□□□ 0.93
PLOD3-216ENST00000489927 NECTIN2Q92692 538 aa20.83■□□□□ 0.93
PLOD3-216ENST00000489927 PPIP5K2O43314 1243 aa20.82■□□□□ 0.92
PLOD3-216ENST00000489927 LMOD3Q0VAK6 560 aa20.82■□□□□ 0.92
PLOD3-216ENST00000489927 AOC3Q16853 763 aa20.82■□□□□ 0.92
PLOD3-216ENST00000489927 COPS6Q7L5N1 327 aa20.82■□□□□ 0.92
PLOD3-216ENST00000489927 TMX4Q9H1E5 349 aaPredicted RBP20.82■□□□□ 0.92
PLOD3-216ENST00000489927 AIMP1Q12904 312 aaKnown RBP20.81■□□□□ 0.92
PLOD3-216ENST00000489927 DEFB115Q30KQ5 88 aa20.81■□□□□ 0.92
PLOD3-216ENST00000489927 XAGE3Q8WTP9 111 aa20.81■□□□□ 0.92
PLOD3-216ENST00000489927 AIDAQ96BJ3 306 aa20.81■□□□□ 0.92
PLOD3-216ENST00000489927 DDX21Q9NR30 783 aaKnown RBP eCLIP20.81■□□□□ 0.92
PLOD3-216ENST00000489927 HSP90AB3PQ58FF7 597 aa20.8■□□□□ 0.92
PLOD3-216ENST00000489927 USP50Q70EL3 339 aaPredicted RBP20.8■□□□□ 0.92
PLOD3-216ENST00000489927 NLRP10Q86W26 655 aa20.8■□□□□ 0.92
PLOD3-216ENST00000489927 PRDM10Q9NQV6 1147 aa20.8■□□□□ 0.92
PLOD3-216ENST00000489927 WBP1LQ9NX94 342 aa20.8■□□□□ 0.92
PLOD3-216ENST00000489927 ABT1Q9ULW3 272 aaKnown RBP20.8■□□□□ 0.92
PLOD3-216ENST00000489927 HCLS1P14317 486 aaPredicted RBP20.79■□□□□ 0.92
PLOD3-216ENST00000489927 CTCFP49711 727 aaPredicted RBP20.79■□□□□ 0.92
PLOD3-216ENST00000489927 FMR1Q06787 632 aaKnown RBP eCLIP20.79■□□□□ 0.92
PLOD3-216ENST00000489927 NEUROD2Q15784 382 aa20.79■□□□□ 0.92
PLOD3-216ENST00000489927 KRT24Q2M2I5 525 aa20.79■□□□□ 0.92
PLOD3-216ENST00000489927 CCDC146Q8IYE0 955 aa20.79■□□□□ 0.92
PLOD3-216ENST00000489927 VPS33BQ9H267 617 aa20.79■□□□□ 0.92
PLOD3-216ENST00000489927 ANKRD36CQ5JPF3 1778 aa20.78■□□□□ 0.92
PLOD3-216ENST00000489927 BBOX1O75936 387 aa20.78■□□□□ 0.92
PLOD3-216ENST00000489927 TCIRG1Q13488 830 aa20.78■□□□□ 0.92
PLOD3-216ENST00000489927 RTFDC1Q9BY42 306 aaPredicted RBP20.78■□□□□ 0.92
PLOD3-216ENST00000489927 WDR33Q9C0J8 1336 aaKnown RBP20.78■□□□□ 0.92
PLOD3-216ENST00000489927 CHL1O00533 1208 aa20.77■□□□□ 0.92
PLOD3-216ENST00000489927 CXCL9Q07325 125 aa20.77■□□□□ 0.92
PLOD3-216ENST00000489927 DPP8Q6V1X1 898 aaPredicted RBP20.77■□□□□ 0.92
PLOD3-216ENST00000489927 SP8Q8IXZ3 490 aa20.77■□□□□ 0.92
PLOD3-216ENST00000489927 SUPT20HQ8NEM7 779 aa20.77■□□□□ 0.92
PLOD3-216ENST00000489927 GPRC5DQ9NZD1 345 aa20.77■□□□□ 0.92
PLOD3-216ENST00000489927 TRMT112Q9UI30 125 aaKnown RBP20.77■□□□□ 0.92
PLOD3-216ENST00000489927 ZNRF3Q9ULT6 936 aa20.77■□□□□ 0.92
PLOD3-216ENST00000489927 LAMB2P55268 1798 aa20.77■□□□□ 0.91
PLOD3-216ENST00000489927 TRAF5O00463 557 aa20.76■□□□□ 0.91
PLOD3-216ENST00000489927 SH3TC1Q8TE82 1336 aa20.76■□□□□ 0.91
PLOD3-216ENST00000489927 LBX1P52954 281 aa20.75■□□□□ 0.91
PLOD3-216ENST00000489927 DDX46Q7L014 1031 aaKnown RBP20.75■□□□□ 0.91
PLOD3-216ENST00000489927 MPNDQ8N594 471 aa20.75■□□□□ 0.91
PLOD3-216ENST00000489927 ZNF428Q96B54 188 aa20.75■□□□□ 0.91
PLOD3-216ENST00000489927 ADARB2Q9NS39 739 aaKnown RBP20.75■□□□□ 0.91
PLOD3-216ENST00000489927 CHPF2Q9P2E5 772 aa20.75■□□□□ 0.91
PLOD3-216ENST00000489927 TRIM35Q9UPQ4 493 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms