RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 NYXQ9GZU5 481 aa13.86□□□□□ -0.19
HDLBP-242ENST00000488013 UTYO14607 1347 aa13.86□□□□□ -0.19
HDLBP-242ENST00000488013 C4BP0C0L5 1744 aa13.85□□□□□ -0.19
HDLBP-242ENST00000488013 HLFQ16534 295 aa13.85□□□□□ -0.19
HDLBP-242ENST00000488013 USPL1Q5W0Q7 1092 aa13.85□□□□□ -0.19
HDLBP-242ENST00000488013 NLRP10Q86W26 655 aa13.85□□□□□ -0.19
HDLBP-242ENST00000488013 ZBTB38Q8NAP3 1195 aaPredicted RBP13.85□□□□□ -0.19
HDLBP-242ENST00000488013 EXOC6Q8TAG9 804 aa13.85□□□□□ -0.19
HDLBP-242ENST00000488013 USP44Q9H0E7 712 aa13.85□□□□□ -0.19
HDLBP-242ENST00000488013 TNNQ9UQP3 1299 aa13.85□□□□□ -0.19
HDLBP-242ENST00000488013 NIP7Q9Y221 180 aaKnown RBP eCLIP13.85□□□□□ -0.19
HDLBP-242ENST00000488013 RREB1Q92766 1687 aa13.85□□□□□ -0.19
HDLBP-242ENST00000488013 TNS1Q9HBL0 1735 aaKnown RBP13.84□□□□□ -0.19
HDLBP-242ENST00000488013 ATP5J2-PTCD1G3V325 749 aa13.84□□□□□ -0.19
HDLBP-242ENST00000488013 PCCAP05165 728 aaPredicted RBP13.84□□□□□ -0.19
HDLBP-242ENST00000488013 IRX6P78412 446 aaPredicted RBP13.84□□□□□ -0.19
HDLBP-242ENST00000488013 CWF19L2Q2TBE0 894 aaKnown RBP13.84□□□□□ -0.19
HDLBP-242ENST00000488013 RPAP2Q8IXW5 612 aaPredicted RBP13.84□□□□□ -0.19
HDLBP-242ENST00000488013 UTP14AQ9BVJ6 771 aaKnown RBP13.84□□□□□ -0.19
HDLBP-242ENST00000488013 H7C1W4 665 aa13.83□□□□□ -0.2
HDLBP-242ENST00000488013 TPTE2Q6XPS3 522 aa13.83□□□□□ -0.2
HDLBP-242ENST00000488013 COL23A1Q86Y22 540 aaPredicted RBP13.83□□□□□ -0.2
HDLBP-242ENST00000488013 PPP4R2Q9NY27 417 aa13.83□□□□□ -0.2
HDLBP-242ENST00000488013 COL5A3P25940 1745 aaPredicted RBP13.83□□□□□ -0.2
HDLBP-242ENST00000488013 HMMRO75330 724 aa13.82□□□□□ -0.2
HDLBP-242ENST00000488013 GYS1P13807 737 aa13.82□□□□□ -0.2
HDLBP-242ENST00000488013 MEIS3Q99687 375 aa13.82□□□□□ -0.2
HDLBP-242ENST00000488013 ANO8Q9HCE9 1232 aaPredicted RBP13.82□□□□□ -0.2
HDLBP-242ENST00000488013 TRMT112Q9UI30 125 aaKnown RBP13.82□□□□□ -0.2
HDLBP-242ENST00000488013 PNPLA7Q6ZV29 1317 aa13.82□□□□□ -0.2
HDLBP-242ENST00000488013 SH3TC1Q8TE82 1336 aa13.82□□□□□ -0.2
HDLBP-242ENST00000488013 GPTP24298 496 aa13.81□□□□□ -0.2
HDLBP-242ENST00000488013 GTF2E1P29083 439 aaPredicted RBP13.81□□□□□ -0.2
HDLBP-242ENST00000488013 AMIGO3Q86WK7 504 aa13.81□□□□□ -0.2
HDLBP-242ENST00000488013 PLA2G12BQ9BX93 195 aa13.81□□□□□ -0.2
HDLBP-242ENST00000488013 BCL2L12Q9HB09 334 aa13.81□□□□□ -0.2
HDLBP-242ENST00000488013 SRP68Q9UHB9 627 aaKnown RBP13.81□□□□□ -0.2
HDLBP-242ENST00000488013 CDHR2Q9BYE9 1310 aa13.81□□□□□ -0.2
HDLBP-242ENST00000488013 CARMIL3Q8ND23 1372 aa13.81□□□□□ -0.2
HDLBP-242ENST00000488013 NBPF7P0C2Y1 421 aaPredicted RBP13.8□□□□□ -0.2
HDLBP-242ENST00000488013 TBC1D9BQ66K14 1250 aa13.8□□□□□ -0.2
HDLBP-242ENST00000488013 UBE3BQ7Z3V4 1068 aa13.8□□□□□ -0.2
HDLBP-242ENST00000488013 NBPF5PQ86XG9 351 aaPredicted RBP13.8□□□□□ -0.2
HDLBP-242ENST00000488013 RWDD1Q9H446 243 aaPredicted RBP13.8□□□□□ -0.2
HDLBP-242ENST00000488013 GTF3C3Q9Y5Q9 886 aa13.8□□□□□ -0.2
HDLBP-242ENST00000488013 SRCAPQ6ZRS2 3230 aa13.8□□□□□ -0.2
HDLBP-242ENST00000488013 NPHP1O15259 732 aa13.79□□□□□ -0.2
HDLBP-242ENST00000488013 TM4SF1P30408 202 aa13.79□□□□□ -0.2
HDLBP-242ENST00000488013 NFIXQ14938 502 aa13.79□□□□□ -0.2
HDLBP-242ENST00000488013 SUSD4Q5VX71 490 aa13.79□□□□□ -0.2
HDLBP-242ENST00000488013 CASP7P55210 303 aa13.78□□□□□ -0.2
HDLBP-242ENST00000488013 MTX1Q13505 466 aa13.78□□□□□ -0.2
HDLBP-242ENST00000488013 HDAC1Q13547 482 aaPredicted RBP13.78□□□□□ -0.2
HDLBP-242ENST00000488013 SLC10A5Q5PT55 438 aa13.78□□□□□ -0.2
HDLBP-242ENST00000488013 BICDL1Q6ZP65 573 aa13.78□□□□□ -0.2
HDLBP-242ENST00000488013 CCDC136Q96JN2 1154 aa13.78□□□□□ -0.2
HDLBP-242ENST00000488013 LRRFIP2Q9Y608 721 aaKnown RBP13.78□□□□□ -0.2
HDLBP-242ENST00000488013 UBN2Q6ZU65 1347 aa13.78□□□□□ -0.2
HDLBP-242ENST00000488013 IRS4O14654 1257 aaPredicted RBP13.77□□□□□ -0.21
HDLBP-242ENST00000488013 PDE8AO60658 829 aa13.77□□□□□ -0.21
HDLBP-242ENST00000488013 NTSR2O95665 410 aa13.77□□□□□ -0.21
HDLBP-242ENST00000488013 ST5P78524 1137 aa13.77□□□□□ -0.21
HDLBP-242ENST00000488013 RABL6Q3YEC7 729 aaPredicted RBP13.77□□□□□ -0.21
HDLBP-242ENST00000488013 ANKRD44Q8N8A2 993 aa13.77□□□□□ -0.21
HDLBP-242ENST00000488013 CNBD1Q8NA66 436 aa13.77□□□□□ -0.21
HDLBP-242ENST00000488013 FAM89AQ96GI7 184 aa13.77□□□□□ -0.21
HDLBP-242ENST00000488013 PARP3Q9Y6F1 533 aa13.77□□□□□ -0.21
HDLBP-242ENST00000488013 MYH14Q7Z406 1995 aaKnown RBP13.76□□□□□ -0.21
HDLBP-242ENST00000488013 ATP8B2P98198 1209 aa13.76□□□□□ -0.21
HDLBP-242ENST00000488013 CEP85Q6P2H3 762 aa13.76□□□□□ -0.21
HDLBP-242ENST00000488013 SMIM5Q71RC9 77 aa13.76□□□□□ -0.21
HDLBP-242ENST00000488013 PDZRN3Q9UPQ7 1066 aa13.76□□□□□ -0.21
HDLBP-242ENST00000488013 SERPINB2P05120 415 aa13.75□□□□□ -0.21
HDLBP-242ENST00000488013 HSP90AB4PQ58FF6 505 aa13.75□□□□□ -0.21
HDLBP-242ENST00000488013 SUCLG2Q96I99 432 aa13.75□□□□□ -0.21
HDLBP-242ENST00000488013 NLRP3Q96P20 1036 aa13.75□□□□□ -0.21
HDLBP-242ENST00000488013 MTFR1LQ9H019 292 aa13.75□□□□□ -0.21
HDLBP-242ENST00000488013 PCDHB15Q9Y5E8 787 aa13.75□□□□□ -0.21
HDLBP-242ENST00000488013 TAF1LQ8IZX4 1826 aa13.75□□□□□ -0.21
HDLBP-242ENST00000488013 POLRMTO00411 1230 aaKnown RBP13.74□□□□□ -0.21
HDLBP-242ENST00000488013 SRGAP3O43295 1099 aa13.74□□□□□ -0.21
HDLBP-242ENST00000488013 MMP10P09238 476 aa13.74□□□□□ -0.21
HDLBP-242ENST00000488013 POLD1P28340 1107 aa13.74□□□□□ -0.21
HDLBP-242ENST00000488013 CCDC152Q4G0S7 254 aa13.74□□□□□ -0.21
HDLBP-242ENST00000488013 CENPQQ7L2Z9 268 aaPredicted RBP13.74□□□□□ -0.21
HDLBP-242ENST00000488013 GCC1Q96CN9 775 aa13.74□□□□□ -0.21
HDLBP-242ENST00000488013 BICC1Q9H694 974 aaKnown RBP13.74□□□□□ -0.21
HDLBP-242ENST00000488013 CSF1RP07333 972 aa13.73□□□□□ -0.21
HDLBP-242ENST00000488013 CTSWP56202 376 aa13.73□□□□□ -0.21
HDLBP-242ENST00000488013 MKRN4PQ13434 485 aaPredicted RBP13.73□□□□□ -0.21
HDLBP-242ENST00000488013 SF3B3Q15393 1217 aaKnown RBP13.73□□□□□ -0.21
HDLBP-242ENST00000488013 CCDC57Q2TAC2 916 aa13.73□□□□□ -0.21
HDLBP-242ENST00000488013 SSH3Q8TE77 659 aa13.73□□□□□ -0.21
HDLBP-242ENST00000488013 C1orf115Q9H7X2 142 aa13.73□□□□□ -0.21
HDLBP-242ENST00000488013 FBXO3Q9UK99 471 aa13.73□□□□□ -0.21
HDLBP-242ENST00000488013 FAM177BA6PVY3 158 aa13.72□□□□□ -0.21
HDLBP-242ENST00000488013 FOXO4P98177 505 aa13.72□□□□□ -0.21
HDLBP-242ENST00000488013 IFIT5Q13325 482 aaKnown RBP13.72□□□□□ -0.21
HDLBP-242ENST00000488013 R3HDM1Q15032 1099 aaKnown RBP13.72□□□□□ -0.21
HDLBP-242ENST00000488013 ERFEQ4G0M1 354 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms