RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 TCERG1O14776 1098 aaKnown RBP16.19■□□□□ 0.18
SREBF1-215ENST00000487401 HOXB7P09629 217 aa16.19■□□□□ 0.18
SREBF1-215ENST00000487401 IARSP41252 1262 aaKnown RBP16.19■□□□□ 0.18
SREBF1-215ENST00000487401 CALD1Q05682 793 aaKnown RBP16.19■□□□□ 0.18
SREBF1-215ENST00000487401 GRIPAP1Q4V328 841 aa16.19■□□□□ 0.18
SREBF1-215ENST00000487401 SLC10A5Q5PT55 438 aa16.19■□□□□ 0.18
SREBF1-215ENST00000487401 CHPF2Q9P2E5 772 aa16.19■□□□□ 0.18
SREBF1-215ENST00000487401 ZEB1P37275 1124 aaPredicted RBP16.18■□□□□ 0.18
SREBF1-215ENST00000487401 TCIRG1Q13488 830 aa16.18■□□□□ 0.18
SREBF1-215ENST00000487401 NLRP10Q86W26 655 aa16.18■□□□□ 0.18
SREBF1-215ENST00000487401 JDP2Q8WYK2 163 aa16.18■□□□□ 0.18
SREBF1-215ENST00000487401 PSMD1Q99460 953 aa16.18■□□□□ 0.18
SREBF1-215ENST00000487401 ANKRD31Q8N7Z5 1873 aa16.18■□□□□ 0.18
SREBF1-215ENST00000487401 DLEC1Q9Y238 1755 aa16.18■□□□□ 0.18
SREBF1-215ENST00000487401 PPEF1O14829 653 aaPredicted RBP16.17■□□□□ 0.18
SREBF1-215ENST00000487401 DUSP27Q5VZP5 1158 aa16.17■□□□□ 0.18
SREBF1-215ENST00000487401 C3orf67Q6ZVT6 689 aa16.17■□□□□ 0.18
SREBF1-215ENST00000487401 KLRG1Q96E93 195 aa16.17■□□□□ 0.18
SREBF1-215ENST00000487401 MBIPQ9NS73 344 aa16.17■□□□□ 0.18
SREBF1-215ENST00000487401 DBF4Q9UBU7 674 aaPredicted RBP16.17■□□□□ 0.18
SREBF1-215ENST00000487401 TRMT112Q9UI30 125 aaKnown RBP16.17■□□□□ 0.18
SREBF1-215ENST00000487401 KDM3BQ7LBC6 1761 aa16.17■□□□□ 0.18
SREBF1-215ENST00000487401 RIC1Q4ADV7 1423 aa16.17■□□□□ 0.18
SREBF1-215ENST00000487401 RNF123Q5XPI4 1314 aa16.17■□□□□ 0.18
SREBF1-215ENST00000487401 HCLS1P14317 486 aaPredicted RBP16.16■□□□□ 0.18
SREBF1-215ENST00000487401 CHADLQ6NUI6 762 aa16.16■□□□□ 0.18
SREBF1-215ENST00000487401 ANKRD13DQ6ZTN6 518 aa16.16■□□□□ 0.18
SREBF1-215ENST00000487401 L3MBTL3Q96JM7 780 aaPredicted RBP16.16■□□□□ 0.18
SREBF1-215ENST00000487401 IFT57Q9NWB7 429 aa16.16■□□□□ 0.18
SREBF1-215ENST00000487401 HYPKQ9NX55 129 aa16.16■□□□□ 0.18
SREBF1-215ENST00000487401 COL11A2P13942 1736 aaPredicted RBP16.16■□□□□ 0.18
SREBF1-215ENST00000487401 GNAI1P63096 354 aa16.15■□□□□ 0.18
SREBF1-215ENST00000487401 PLBD2Q8NHP8 589 aa16.15■□□□□ 0.18
SREBF1-215ENST00000487401 SH3TC1Q8TE82 1336 aa16.15■□□□□ 0.18
SREBF1-215ENST00000487401 ZNF541Q9H0D2 1346 aa16.15■□□□□ 0.18
SREBF1-215ENST00000487401 FZD9O00144 591 aa16.14■□□□□ 0.17
SREBF1-215ENST00000487401 BBOX1O75936 387 aa16.14■□□□□ 0.17
SREBF1-215ENST00000487401 ZNF853P0CG23 659 aa16.14■□□□□ 0.17
SREBF1-215ENST00000487401 EIF6P56537 245 aaKnown RBP16.14■□□□□ 0.17
SREBF1-215ENST00000487401 DDX46Q7L014 1031 aaKnown RBP16.14■□□□□ 0.17
SREBF1-215ENST00000487401 LARGE2Q8N3Y3 721 aa16.14■□□□□ 0.17
SREBF1-215ENST00000487401 TAF1DQ9H5J8 278 aaPredicted RBP16.14■□□□□ 0.17
SREBF1-215ENST00000487401 HACL1Q9UJ83 578 aa16.14■□□□□ 0.17
SREBF1-215ENST00000487401 LAMB4A4D0S4 1761 aa16.13■□□□□ 0.17
SREBF1-215ENST00000487401 SLX4Q8IY92 1834 aa16.13■□□□□ 0.17
SREBF1-215ENST00000487401 LDHDQ86WU2 507 aa16.13■□□□□ 0.17
SREBF1-215ENST00000487401 CLEC11AQ9Y240 323 aa16.13■□□□□ 0.17
SREBF1-215ENST00000487401 ATP6V0A2Q9Y487 856 aa16.13■□□□□ 0.17
SREBF1-215ENST00000487401 ELL2O00472 640 aaPredicted RBP16.12■□□□□ 0.17
SREBF1-215ENST00000487401 POTEIP0CG38 1075 aa16.12■□□□□ 0.17
SREBF1-215ENST00000487401 POTEJP0CG39 1038 aa16.12■□□□□ 0.17
SREBF1-215ENST00000487401 EAPPQ56P03 285 aaPredicted RBP16.12■□□□□ 0.17
SREBF1-215ENST00000487401 GPC2Q8N158 579 aa16.12■□□□□ 0.17
SREBF1-215ENST00000487401 CHMP4AQ9BY43 222 aa16.12■□□□□ 0.17
SREBF1-215ENST00000487401 GJA3Q9Y6H8 435 aa16.12■□□□□ 0.17
SREBF1-215ENST00000487401 ABCC4O15439 1325 aa16.12■□□□□ 0.17
SREBF1-215ENST00000487401 DLG5Q8TDM6 1919 aa16.11■□□□□ 0.17
SREBF1-215ENST00000487401 TNRC6CQ9HCJ0 1690 aaKnown RBP16.11■□□□□ 0.17
SREBF1-215ENST00000487401 ATP5J2-PTCD1G3V325 749 aa16.11■□□□□ 0.17
SREBF1-215ENST00000487401 EPHX2P34913 555 aa16.11■□□□□ 0.17
SREBF1-215ENST00000487401 GOLGA2Q08379 1002 aa16.11■□□□□ 0.17
SREBF1-215ENST00000487401 RIC3Q7Z5B4 369 aa16.11■□□□□ 0.17
SREBF1-215ENST00000487401 NIM1KQ8IY84 436 aa16.11■□□□□ 0.17
SREBF1-215ENST00000487401 SUPT20HQ8NEM7 779 aa16.11■□□□□ 0.17
SREBF1-215ENST00000487401 ZNF428Q96B54 188 aa16.11■□□□□ 0.17
SREBF1-215ENST00000487401 ISCA1Q9BUE6 129 aa16.11■□□□□ 0.17
SREBF1-215ENST00000487401 SBF1O95248 1867 aa16.11■□□□□ 0.17
SREBF1-215ENST00000487401 PPIP5K2O43314 1243 aa16.1■□□□□ 0.17
SREBF1-215ENST00000487401 GRAPQ13588 217 aa16.1■□□□□ 0.17
SREBF1-215ENST00000487401 DPP8Q6V1X1 898 aaPredicted RBP16.1■□□□□ 0.17
SREBF1-215ENST00000487401 PNMA8AQ86V59 439 aaPredicted RBP16.1■□□□□ 0.17
SREBF1-215ENST00000487401 SP8Q8IXZ3 490 aa16.1■□□□□ 0.17
SREBF1-215ENST00000487401 JMYQ8N9B5 988 aa16.1■□□□□ 0.17
SREBF1-215ENST00000487401 GRAPLQ8TC17 118 aaPredicted RBP16.1■□□□□ 0.17
SREBF1-215ENST00000487401 FAM89AQ96GI7 184 aa16.1■□□□□ 0.17
SREBF1-215ENST00000487401 VPS33BQ9H267 617 aa16.1■□□□□ 0.17
SREBF1-215ENST00000487401 LMOD1P29536 600 aaPredicted RBP16.09■□□□□ 0.17
SREBF1-215ENST00000487401 SLC51AQ86UW1 340 aa16.09■□□□□ 0.17
SREBF1-215ENST00000487401 MPNDQ8N594 471 aa16.09■□□□□ 0.17
SREBF1-215ENST00000487401 WDR90Q96KV7 1748 aa16.08■□□□□ 0.17
SREBF1-215ENST00000487401 TRIM28Q13263 835 aaKnown RBP16.08■□□□□ 0.16
SREBF1-215ENST00000487401 CCDC184Q52MB2 194 aa16.08■□□□□ 0.16
SREBF1-215ENST00000487401 CCDC30Q5VVM6 783 aa16.08■□□□□ 0.16
SREBF1-215ENST00000487401 TMC4Q7Z404 712 aa16.08■□□□□ 0.16
SREBF1-215ENST00000487401 C8orf58Q8NAV2 365 aa16.08■□□□□ 0.16
SREBF1-215ENST00000487401 CREBZFQ9NS37 354 aa16.08■□□□□ 0.16
SREBF1-215ENST00000487401 SNED1Q8TER0 1413 aa16.08■□□□□ 0.16
SREBF1-215ENST00000487401 AOC3Q16853 763 aa16.07■□□□□ 0.16
SREBF1-215ENST00000487401 RTL5Q5HYW3 569 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-215ENST00000487401 IFFO2Q5TF58 517 aa16.07■□□□□ 0.16
SREBF1-215ENST00000487401 RTFDC1Q9BY42 306 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-215ENST00000487401 PHAXQ9H814 394 aaKnown RBP16.07■□□□□ 0.16
SREBF1-215ENST00000487401 TIAM2Q8IVF5 1701 aa16.07■□□□□ 0.16
SREBF1-215ENST00000487401 FER1L6Q2WGJ9 1857 aa16.07■□□□□ 0.16
SREBF1-215ENST00000487401 ZNF316A6NFI3 1004 aaPredicted RBP16.06■□□□□ 0.16
SREBF1-215ENST00000487401 IRS4O14654 1257 aaPredicted RBP16.06■□□□□ 0.16
SREBF1-215ENST00000487401 ANP32CO43423 234 aa16.06■□□□□ 0.16
SREBF1-215ENST00000487401 DDX58O95786 925 aaKnown RBP16.06■□□□□ 0.16
SREBF1-215ENST00000487401 HSP90B1P14625 803 aaKnown RBP16.06■□□□□ 0.16
SREBF1-215ENST00000487401 SF3B3Q15393 1217 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms