RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 HABP4Q5JVS0 413 aaKnown RBP20.82■□□□□ 0.92
U2AF1-211ENST00000486519 TRPA1O75762 1119 aa20.81■□□□□ 0.92
U2AF1-211ENST00000486519 TRPM4Q8TD43 1214 aa20.81■□□□□ 0.92
U2AF1-211ENST00000486519 RNF186Q9NXI6 227 aa20.81■□□□□ 0.92
U2AF1-211ENST00000486519 PGAP2Q9UHJ9 254 aa20.81■□□□□ 0.92
U2AF1-211ENST00000486519 HPS5Q9UPZ3 1129 aa20.81■□□□□ 0.92
U2AF1-211ENST00000486519 HUNKP57058 714 aa20.8■□□□□ 0.92
U2AF1-211ENST00000486519 IL17REQ8NFR9 667 aa20.8■□□□□ 0.92
U2AF1-211ENST00000486519 NIP7Q9Y221 180 aaKnown RBP eCLIP20.8■□□□□ 0.92
U2AF1-211ENST00000486519 USP16Q9Y5T5 823 aa20.8■□□□□ 0.92
U2AF1-211ENST00000486519 TCERG1O14776 1098 aaKnown RBP20.79■□□□□ 0.92
U2AF1-211ENST00000486519 ALDH1B1P30837 517 aa20.79■□□□□ 0.92
U2AF1-211ENST00000486519 GMPSP49915 693 aaPredicted RBP20.79■□□□□ 0.92
U2AF1-211ENST00000486519 KIF23Q02241 960 aaPredicted RBP20.79■□□□□ 0.92
U2AF1-211ENST00000486519 MKI67P46013 3256 aaKnown RBP20.79■□□□□ 0.92
U2AF1-211ENST00000486519 NPC1L1Q9UHC9 1359 aa20.78■□□□□ 0.92
U2AF1-211ENST00000486519 AOC3Q16853 763 aa20.78■□□□□ 0.92
U2AF1-211ENST00000486519 TPTE2Q6XPS3 522 aa20.78■□□□□ 0.92
U2AF1-211ENST00000486519 CXCL9Q07325 125 aa20.77■□□□□ 0.92
U2AF1-211ENST00000486519 HLFQ16534 295 aa20.77■□□□□ 0.92
U2AF1-211ENST00000486519 CRY2Q49AN0 593 aa20.77■□□□□ 0.92
U2AF1-211ENST00000486519 CLEC4GQ6UXB4 293 aa20.77■□□□□ 0.92
U2AF1-211ENST00000486519 CTU1Q7Z7A3 348 aaKnown RBP20.77■□□□□ 0.92
U2AF1-211ENST00000486519 NUTM1Q86Y26 1132 aa20.77■□□□□ 0.92
U2AF1-211ENST00000486519 NIM1KQ8IY84 436 aa20.77■□□□□ 0.92
U2AF1-211ENST00000486519 TEX13AQ9BXU3 409 aaPredicted RBP20.77■□□□□ 0.92
U2AF1-211ENST00000486519 SAGE1Q9NXZ1 904 aa20.77■□□□□ 0.92
U2AF1-211ENST00000486519 USP48Q86UV5 1035 aa20.76■□□□□ 0.91
U2AF1-211ENST00000486519 MORC1Q86VD1 984 aa20.76■□□□□ 0.91
U2AF1-211ENST00000486519 PANK3Q9H999 370 aa20.75■□□□□ 0.91
U2AF1-211ENST00000486519 PPIP5K2O43314 1243 aa20.74■□□□□ 0.91
U2AF1-211ENST00000486519 RGMBQ6NW40 437 aa20.74■□□□□ 0.91
U2AF1-211ENST00000486519 NBPF15Q8N660 670 aa20.74■□□□□ 0.91
U2AF1-211ENST00000486519 FMNL2Q96PY5 1086 aa20.74■□□□□ 0.91
U2AF1-211ENST00000486519 NUP98P52948 1817 aa20.74■□□□□ 0.91
U2AF1-211ENST00000486519 NBPF26B4DH59 902 aa20.73■□□□□ 0.91
U2AF1-211ENST00000486519 NBPF10Q6P3W6 841 aaKnown RBP20.73■□□□□ 0.91
U2AF1-211ENST00000486519 C3orf67Q6ZVT6 689 aa20.73■□□□□ 0.91
U2AF1-211ENST00000486519 NPM2Q86SE8 214 aaKnown RBP20.73■□□□□ 0.91
U2AF1-211ENST00000486519 FXR1P51114 621 aaKnown RBP eCLIP20.72■□□□□ 0.91
U2AF1-211ENST00000486519 CDC37L1Q7L3B6 337 aa20.72■□□□□ 0.91
U2AF1-211ENST00000486519 CSRNP1Q96S65 589 aa20.72■□□□□ 0.91
U2AF1-211ENST00000486519 RIC1Q4ADV7 1423 aa20.71■□□□□ 0.91
U2AF1-211ENST00000486519 TEFQ10587 303 aa20.71■□□□□ 0.91
U2AF1-211ENST00000486519 CC2D2BQ6DHV5 1058 aa20.71■□□□□ 0.91
U2AF1-211ENST00000486519 GCC1Q96CN9 775 aa20.71■□□□□ 0.91
U2AF1-211ENST00000486519 ZNF652Q9Y2D9 606 aa20.71■□□□□ 0.91
U2AF1-211ENST00000486519 PPEF1O14829 653 aaPredicted RBP20.69■□□□□ 0.9
U2AF1-211ENST00000486519 RAD17O75943 681 aa20.69■□□□□ 0.9
U2AF1-211ENST00000486519 EGFRP00533 1210 aa20.69■□□□□ 0.9
U2AF1-211ENST00000486519 HOXA10P31260 410 aaPredicted RBP20.69■□□□□ 0.9
U2AF1-211ENST00000486519 ADM5C9JUS6 153 aa20.68■□□□□ 0.9
U2AF1-211ENST00000486519 GTF2E1P29083 439 aaPredicted RBP20.68■□□□□ 0.9
U2AF1-211ENST00000486519 ZNF157P51786 506 aaPredicted RBP20.68■□□□□ 0.9
U2AF1-211ENST00000486519 ZC3H15Q8WU90 426 aaKnown RBP20.68■□□□□ 0.9
U2AF1-211ENST00000486519 GBA2Q9HCG7 927 aaPredicted RBP20.68■□□□□ 0.9
U2AF1-211ENST00000486519 ZNRF3Q9ULT6 936 aa20.68■□□□□ 0.9
U2AF1-211ENST00000486519 SLC10A3P09131 477 aa20.67■□□□□ 0.9
U2AF1-211ENST00000486519 RPGRQ92834 1020 aaKnown RBP20.67■□□□□ 0.9
U2AF1-211ENST00000486519 YDJCA8MPS7 323 aa20.66■□□□□ 0.9
U2AF1-211ENST00000486519 SAMD7Q7Z3H4 446 aa20.66■□□□□ 0.9
U2AF1-211ENST00000486519 CNOT7Q9UIV1 285 aaKnown RBP20.66■□□□□ 0.9
U2AF1-211ENST00000486519 TAF1P21675 1872 aa20.66■□□□□ 0.9
U2AF1-211ENST00000486519 CEMIPQ8WUJ3 1361 aa20.65■□□□□ 0.9
U2AF1-211ENST00000486519 BCL2L13Q9BXK5 485 aa20.65■□□□□ 0.9
U2AF1-211ENST00000486519 LAMB2P55268 1798 aa20.64■□□□□ 0.9
U2AF1-211ENST00000486519 KIF7Q2M1P5 1343 aa20.64■□□□□ 0.89
U2AF1-211ENST00000486519 UBN2Q6ZU65 1347 aa20.64■□□□□ 0.89
U2AF1-211ENST00000486519 BTBD11A6QL63 1104 aa20.64■□□□□ 0.89
U2AF1-211ENST00000486519 GNAT3A8MTJ3 354 aa20.64■□□□□ 0.89
U2AF1-211ENST00000486519 MICALL2Q8IY33 904 aa20.64■□□□□ 0.89
U2AF1-211ENST00000486519 ZNF296Q8WUU4 475 aaPredicted RBP20.64■□□□□ 0.89
U2AF1-211ENST00000486519 CCDC102AQ96A19 550 aa20.64■□□□□ 0.89
U2AF1-211ENST00000486519 ZBTB12Q9Y330 459 aaPredicted RBP20.64■□□□□ 0.89
U2AF1-211ENST00000486519 PAPPA2Q9BXP8 1791 aa20.64■□□□□ 0.89
U2AF1-211ENST00000486519 KRT26Q7Z3Y9 468 aa20.63■□□□□ 0.89
U2AF1-211ENST00000486519 CRAMP1Q96RY5 1269 aa20.63■□□□□ 0.89
U2AF1-211ENST00000486519 SZT2Q5T011 3432 aa20.63■□□□□ 0.89
U2AF1-211ENST00000486519 DUOX1Q9NRD9 1551 aa20.63■□□□□ 0.89
U2AF1-211ENST00000486519 HTTP42858 3142 aa20.62■□□□□ 0.89
U2AF1-211ENST00000486519 CDHR2Q9BYE9 1310 aa20.62■□□□□ 0.89
U2AF1-211ENST00000486519 TBC1D8O95759 1140 aa20.62■□□□□ 0.89
U2AF1-211ENST00000486519 LAMB4A4D0S4 1761 aa20.62■□□□□ 0.89
U2AF1-211ENST00000486519 GPTP24298 496 aa20.61■□□□□ 0.89
U2AF1-211ENST00000486519 TBC1D10BQ4KMP7 808 aaPredicted RBP20.61■□□□□ 0.89
U2AF1-211ENST00000486519 RASAL3Q86YV0 1011 aa20.61■□□□□ 0.89
U2AF1-211ENST00000486519 C2orf69Q8N8R5 385 aa20.61■□□□□ 0.89
U2AF1-211ENST00000486519 ASTN2O75129 1339 aaPredicted RBP20.6■□□□□ 0.89
U2AF1-211ENST00000486519 POTEFA5A3E0 1075 aa20.6■□□□□ 0.89
U2AF1-211ENST00000486519 GRIPAP1Q4V328 841 aa20.6■□□□□ 0.89
U2AF1-211ENST00000486519 SUSD4Q5VX71 490 aa20.6■□□□□ 0.89
U2AF1-211ENST00000486519 RBM17Q96I25 401 aaKnown RBP20.6■□□□□ 0.89
U2AF1-211ENST00000486519 RTFDC1Q9BY42 306 aaPredicted RBP20.6■□□□□ 0.89
U2AF1-211ENST00000486519 ATP6V0A2Q9Y487 856 aa20.6■□□□□ 0.89
U2AF1-211ENST00000486519 BRCA2P51587 3418 aa20.59■□□□□ 0.89
U2AF1-211ENST00000486519 COL3A1P02461 1466 aaPredicted RBP20.59■□□□□ 0.89
U2AF1-211ENST00000486519 RGL2O15211 777 aa20.59■□□□□ 0.89
U2AF1-211ENST00000486519 NGEFQ8N5V2 710 aa20.59■□□□□ 0.89
U2AF1-211ENST00000486519 HDAC9Q9UKV0 1011 aa20.59■□□□□ 0.89
U2AF1-211ENST00000486519 CENPFP49454 3210 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms