RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 WDR43Q15061 677 aaKnown RBP eCLIP23.17■■□□□ 1.3
MCF2L-226ENST00000486210 PNMA8AQ86V59 439 aaPredicted RBP23.17■■□□□ 1.3
MCF2L-226ENST00000486210 NEFMP07197 916 aa23.16■■□□□ 1.3
MCF2L-226ENST00000486210 DEFB115Q30KQ5 88 aa23.16■■□□□ 1.3
MCF2L-226ENST00000486210 GPC2Q8N158 579 aa23.16■■□□□ 1.3
MCF2L-226ENST00000486210 HSPA8P11142 646 aaKnown RBP23.15■■□□□ 1.3
MCF2L-226ENST00000486210 CRY2Q49AN0 593 aa23.15■■□□□ 1.3
MCF2L-226ENST00000486210 PSMD1Q99460 953 aa23.15■■□□□ 1.3
MCF2L-226ENST00000486210 THSD7BQ9C0I4 1608 aa23.15■■□□□ 1.3
MCF2L-226ENST00000486210 SLC51AQ86UW1 340 aa23.14■■□□□ 1.29
MCF2L-226ENST00000486210 KDM3BQ7LBC6 1761 aa23.14■■□□□ 1.29
MCF2L-226ENST00000486210 WDR33Q9C0J8 1336 aaKnown RBP23.13■■□□□ 1.29
MCF2L-226ENST00000486210 NUTM1Q86Y26 1132 aa23.13■■□□□ 1.29
MCF2L-226ENST00000486210 DLG5Q8TDM6 1919 aa23.13■■□□□ 1.29
MCF2L-226ENST00000486210 FMR1Q06787 632 aaKnown RBP eCLIP23.12■■□□□ 1.29
MCF2L-226ENST00000486210 PLEKHF1Q96S99 279 aa23.12■■□□□ 1.29
MCF2L-226ENST00000486210 MIS18AQ9NYP9 233 aa23.12■■□□□ 1.29
MCF2L-226ENST00000486210 TRPM7Q96QT4 1865 aa23.11■■□□□ 1.29
MCF2L-226ENST00000486210 GTF2E1P29083 439 aaPredicted RBP23.11■■□□□ 1.29
MCF2L-226ENST00000486210 CCDC146Q8IYE0 955 aa23.11■■□□□ 1.29
MCF2L-226ENST00000486210 FAM9BQ8IZU0 186 aa23.11■■□□□ 1.29
MCF2L-226ENST00000486210 JDP2Q8WYK2 163 aa23.11■■□□□ 1.29
MCF2L-226ENST00000486210 DDX21Q9NR30 783 aaKnown RBP eCLIP23.11■■□□□ 1.29
MCF2L-226ENST00000486210 HTATSF1O43719 755 aaKnown RBP23.1■■□□□ 1.29
MCF2L-226ENST00000486210 TAF7Q15545 349 aaPredicted RBP23.1■■□□□ 1.29
MCF2L-226ENST00000486210 ABT1Q9ULW3 272 aaKnown RBP23.1■■□□□ 1.29
MCF2L-226ENST00000486210 GJA3Q9Y6H8 435 aa23.1■■□□□ 1.29
MCF2L-226ENST00000486210 RIC1Q4ADV7 1423 aa23.09■■□□□ 1.29
MCF2L-226ENST00000486210 SCNN1DP51172 638 aa23.09■■□□□ 1.29
MCF2L-226ENST00000486210 NGEFQ8N5V2 710 aa23.09■■□□□ 1.29
MCF2L-226ENST00000486210 UBN2Q6ZU65 1347 aa23.08■■□□□ 1.29
MCF2L-226ENST00000486210 ERVV-1B6SEH8 477 aa23.08■■□□□ 1.29
MCF2L-226ENST00000486210 EPS15P42566 896 aa23.08■■□□□ 1.29
MCF2L-226ENST00000486210 EIF6P56537 245 aaKnown RBP23.08■■□□□ 1.29
MCF2L-226ENST00000486210 MAP2K1Q02750 393 aaPredicted RBP23.08■■□□□ 1.29
MCF2L-226ENST00000486210 ABHD8Q96I13 439 aa23.08■■□□□ 1.29
MCF2L-226ENST00000486210 NYXQ9GZU5 481 aa23.08■■□□□ 1.29
MCF2L-226ENST00000486210 MAP3K15Q6ZN16 1313 aa23.08■■□□□ 1.28
MCF2L-226ENST00000486210 HOXA10P31260 410 aaPredicted RBP23.07■■□□□ 1.28
MCF2L-226ENST00000486210 CC2D2BQ6DHV5 1058 aa23.07■■□□□ 1.28
MCF2L-226ENST00000486210 TTLL7Q6ZT98 887 aa23.07■■□□□ 1.28
MCF2L-226ENST00000486210 IBTKQ9P2D0 1353 aaPredicted RBP23.05■■□□□ 1.28
MCF2L-226ENST00000486210 LMOD1P29536 600 aaPredicted RBP23.05■■□□□ 1.28
MCF2L-226ENST00000486210 SUSD4Q5VX71 490 aa23.05■■□□□ 1.28
MCF2L-226ENST00000486210 LARGE2Q8N3Y3 721 aa23.05■■□□□ 1.28
MCF2L-226ENST00000486210 GPTP24298 496 aa23.04■■□□□ 1.28
MCF2L-226ENST00000486210 CST9Q5W186 159 aa23.04■■□□□ 1.28
MCF2L-226ENST00000486210 C3orf67Q6ZVT6 689 aa23.04■■□□□ 1.28
MCF2L-226ENST00000486210 RPGRQ92834 1020 aaKnown RBP23.04■■□□□ 1.28
MCF2L-226ENST00000486210 RUNDC1Q96C34 613 aa23.04■■□□□ 1.28
MCF2L-226ENST00000486210 PNNQ9H307 717 aaKnown RBP23.04■■□□□ 1.28
MCF2L-226ENST00000486210 TRAF5O00463 557 aa23.03■■□□□ 1.28
MCF2L-226ENST00000486210 CYP4F22Q6NT55 531 aa23.03■■□□□ 1.28
MCF2L-226ENST00000486210 CAPNS2Q96L46 248 aa23.03■■□□□ 1.28
MCF2L-226ENST00000486210 RRP7AQ9Y3A4 280 aaKnown RBP23.03■■□□□ 1.28
MCF2L-226ENST00000486210 TCERG1O14776 1098 aaKnown RBP23.02■■□□□ 1.28
MCF2L-226ENST00000486210 NTSR2O95665 410 aa23.02■■□□□ 1.28
MCF2L-226ENST00000486210 EIF4A1P60842 406 aaKnown RBP23.02■■□□□ 1.28
MCF2L-226ENST00000486210 USP50Q70EL3 339 aaPredicted RBP23.02■■□□□ 1.28
MCF2L-226ENST00000486210 CRAMP1Q96RY5 1269 aa23.02■■□□□ 1.28
MCF2L-226ENST00000486210 ZBTB3Q9H5J0 574 aa23.02■■□□□ 1.28
MCF2L-226ENST00000486210 PPEF1O14829 653 aaPredicted RBP23.01■■□□□ 1.27
MCF2L-226ENST00000486210 MYL6BP14649 208 aa23.01■■□□□ 1.27
MCF2L-226ENST00000486210 FAM161AQ3B820 660 aa23.01■■□□□ 1.27
MCF2L-226ENST00000486210 GRIPAP1Q4V328 841 aa23.01■■□□□ 1.27
MCF2L-226ENST00000486210 ZNF34Q8IZ26 560 aa23.01■■□□□ 1.27
MCF2L-226ENST00000486210 RBM17Q96I25 401 aaKnown RBP23.01■■□□□ 1.27
MCF2L-226ENST00000486210 MAPK8IP3Q9UPT6 1336 aa23.01■■□□□ 1.27
MCF2L-226ENST00000486210 KIF6Q6ZMV9 814 aa23■■□□□ 1.27
MCF2L-226ENST00000486210 TLL2Q9Y6L7 1015 aa23■■□□□ 1.27
MCF2L-226ENST00000486210 LAMB2P55268 1798 aa22.99■■□□□ 1.27
MCF2L-226ENST00000486210 GRM1Q13255 1194 aa22.99■■□□□ 1.27
MCF2L-226ENST00000486210 PAXIP1Q6ZW49 1069 aaPredicted RBP22.99■■□□□ 1.27
MCF2L-226ENST00000486210 GPR101Q96P66 508 aaPredicted RBP22.99■■□□□ 1.27
MCF2L-226ENST00000486210 APAF1O14727 1248 aa22.98■■□□□ 1.27
MCF2L-226ENST00000486210 ECE1P42892 770 aa22.98■■□□□ 1.27
MCF2L-226ENST00000486210 NFE2L2Q16236 605 aa22.98■■□□□ 1.27
MCF2L-226ENST00000486210 AOC3Q16853 763 aa22.98■■□□□ 1.27
MCF2L-226ENST00000486210 GIGYF2Q6Y7W6 1299 aaKnown RBP22.98■■□□□ 1.27
MCF2L-226ENST00000486210 NIM1KQ8IY84 436 aa22.98■■□□□ 1.27
MCF2L-226ENST00000486210 PPIP5K2O43314 1243 aa22.97■■□□□ 1.27
MCF2L-226ENST00000486210 TMPOP42166 694 aaKnown RBP22.97■■□□□ 1.27
MCF2L-226ENST00000486210 THUMPD2Q9BTF0 503 aaKnown RBP22.97■■□□□ 1.27
MCF2L-226ENST00000486210 GPRC5DQ9NZD1 345 aa22.97■■□□□ 1.27
MCF2L-226ENST00000486210 AOC2O75106 756 aa22.96■■□□□ 1.27
MCF2L-226ENST00000486210 SLC34A2O95436 690 aa22.96■■□□□ 1.27
MCF2L-226ENST00000486210 ADARB2Q9NS39 739 aaKnown RBP22.96■■□□□ 1.27
MCF2L-226ENST00000486210 TSKSQ9UJT2 592 aa22.96■■□□□ 1.27
MCF2L-226ENST00000486210 LRP10Q7Z4F1 713 aa22.95■■□□□ 1.26
MCF2L-226ENST00000486210 ABCC4O15439 1325 aa22.94■■□□□ 1.26
MCF2L-226ENST00000486210 CXCL9Q07325 125 aa22.94■■□□□ 1.26
MCF2L-226ENST00000486210 NEUROD2Q15784 382 aa22.94■■□□□ 1.26
MCF2L-226ENST00000486210 SAPCD2Q86UD0 394 aa22.94■■□□□ 1.26
MCF2L-226ENST00000486210 BEGAINQ9BUH8 593 aa22.94■■□□□ 1.26
MCF2L-226ENST00000486210 ATP6V0A2Q9Y487 856 aa22.94■■□□□ 1.26
MCF2L-226ENST00000486210 ANKRD36CQ5JPF3 1778 aa22.94■■□□□ 1.26
MCF2L-226ENST00000486210 RIPK4P57078 832 aa22.93■■□□□ 1.26
MCF2L-226ENST00000486210 PPP1R42Q7Z4L9 355 aa22.93■■□□□ 1.26
MCF2L-226ENST00000486210 NLRP3Q96P20 1036 aa22.93■■□□□ 1.26
MCF2L-226ENST00000486210 RTFDC1Q9BY42 306 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms