RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 GRM5P41594 1212 aa10□□□□□ -0.81
SMC4-217ENST00000485867 ARID5BQ14865 1188 aa10□□□□□ -0.81
SMC4-217ENST00000485867 SH3BP5LQ7L8J4 393 aa10□□□□□ -0.81
SMC4-217ENST00000485867 ZFP42Q96MM3 310 aa10□□□□□ -0.81
SMC4-217ENST00000485867 SPATA31A1Q5TZJ5 1347 aa10□□□□□ -0.81
SMC4-217ENST00000485867 SBF2Q86WG5 1849 aa9.99□□□□□ -0.81
SMC4-217ENST00000485867 NR5A1Q13285 461 aa9.99□□□□□ -0.81
SMC4-217ENST00000485867 SKIV2LQ15477 1246 aaKnown RBP9.99□□□□□ -0.81
SMC4-217ENST00000485867 TMEM132EQ6IEE7 984 aa9.99□□□□□ -0.81
SMC4-217ENST00000485867 PHRF1Q9P1Y6 1649 aaKnown RBP9.99□□□□□ -0.81
SMC4-217ENST00000485867 ANKARQ7Z5J8 1434 aa9.99□□□□□ -0.81
SMC4-217ENST00000485867 NR3C2P08235 984 aa9.98□□□□□ -0.81
SMC4-217ENST00000485867 ITGAEP38570 1179 aa9.98□□□□□ -0.81
SMC4-217ENST00000485867 CTDSPL2Q05D32 466 aa9.98□□□□□ -0.81
SMC4-217ENST00000485867 SH3D19Q5HYK7 790 aa9.98□□□□□ -0.81
SMC4-217ENST00000485867 MRPL14Q6P1L8 145 aaKnown RBP9.98□□□□□ -0.81
SMC4-217ENST00000485867 FAM117AQ9C073 453 aa9.98□□□□□ -0.81
SMC4-217ENST00000485867 PIK3C2GO75747 1445 aa9.98□□□□□ -0.81
SMC4-217ENST00000485867 PMFBP1Q8TBY8 1022 aa9.97□□□□□ -0.81
SMC4-217ENST00000485867 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMC4-217ENST00000485867 PRDM11Q9NQV5 511 aa9.97□□□□□ -0.81
SMC4-217ENST00000485867 PEAK1Q9H792 1746 aa9.96□□□□□ -0.81
SMC4-217ENST00000485867 PARP4Q9UKK3 1724 aaKnown RBP9.96□□□□□ -0.81
SMC4-217ENST00000485867 TRMT44Q8IYL2 757 aaKnown RBP9.96□□□□□ -0.82
SMC4-217ENST00000485867 ITPKCQ96DU7 683 aa9.96□□□□□ -0.82
SMC4-217ENST00000485867 SIRT1Q96EB6 747 aa9.96□□□□□ -0.82
SMC4-217ENST00000485867 DDRGK1Q96HY6 314 aa9.96□□□□□ -0.82
SMC4-217ENST00000485867 ZFAND3Q9H8U3 227 aa9.96□□□□□ -0.82
SMC4-217ENST00000485867 NXF1Q9UBU9 619 aaKnown RBP9.96□□□□□ -0.82
SMC4-217ENST00000485867 ZIC2O95409 532 aaPredicted RBP9.95□□□□□ -0.82
SMC4-217ENST00000485867 PDE3BQ13370 1112 aa9.95□□□□□ -0.82
SMC4-217ENST00000485867 PROCA1Q8NCQ7 364 aaPredicted RBP9.95□□□□□ -0.82
SMC4-217ENST00000485867 GPKOWQ92917 476 aaPredicted RBP eCLIP9.95□□□□□ -0.824e-13■□□□□ 10.3
SMC4-217ENST00000485867 PURBQ96QR8 312 aaKnown RBP9.95□□□□□ -0.82
SMC4-217ENST00000485867 MAP4K5Q9Y4K4 846 aa9.95□□□□□ -0.82
SMC4-217ENST00000485867 KIAA0232Q92628 1395 aa9.95□□□□□ -0.82
SMC4-217ENST00000485867 ANKRD30BQ9BXX2 1392 aa9.95□□□□□ -0.82
SMC4-217ENST00000485867 SPATA31E1Q6ZUB1 1445 aa9.94□□□□□ -0.82
SMC4-217ENST00000485867 SSH2Q76I76 1423 aa9.94□□□□□ -0.82
SMC4-217ENST00000485867 GPRASP1Q5JY77 1395 aa9.94□□□□□ -0.82
SMC4-217ENST00000485867 ACIN1Q9UKV3 1341 aaKnown RBP9.94□□□□□ -0.82
SMC4-217ENST00000485867 SCARF1Q14162 830 aa9.94□□□□□ -0.82
SMC4-217ENST00000485867 PPP2R2DQ66LE6 453 aa9.94□□□□□ -0.82
SMC4-217ENST00000485867 LRRN4Q8WUT4 740 aa9.94□□□□□ -0.82
SMC4-217ENST00000485867 PDGFDQ9GZP0 370 aaPredicted RBP9.94□□□□□ -0.82
SMC4-217ENST00000485867 STRN4Q9NRL3 753 aa9.94□□□□□ -0.82
SMC4-217ENST00000485867 CEP350Q5VT06 3117 aa9.93□□□□□ -0.82
SMC4-217ENST00000485867 DLC1Q96QB1 1528 aa9.93□□□□□ -0.82
SMC4-217ENST00000485867 MAGEB6P1A0A0J9YX57 407 aa9.93□□□□□ -0.82
SMC4-217ENST00000485867 ZBTB7AO95365 584 aa9.93□□□□□ -0.82
SMC4-217ENST00000485867 CHRNA2Q15822 529 aa9.93□□□□□ -0.82
SMC4-217ENST00000485867 NPAS3Q8IXF0 933 aa9.93□□□□□ -0.82
SMC4-217ENST00000485867 LMO7Q8WWI1 1683 aa9.93□□□□□ -0.82
SMC4-217ENST00000485867 FSHRP23945 695 aa9.92□□□□□ -0.82
SMC4-217ENST00000485867 SAFB2Q14151 953 aaKnown RBP eCLIP9.92□□□□□ -0.82
SMC4-217ENST00000485867 SYT17Q9BSW7 474 aa9.92□□□□□ -0.82
SMC4-217ENST00000485867 FHDC1Q9C0D6 1143 aaPredicted RBP9.92□□□□□ -0.82
SMC4-217ENST00000485867 USP35Q9P2H5 1018 aa9.92□□□□□ -0.82
SMC4-217ENST00000485867 TULP4Q9NRJ4 1543 aa9.92□□□□□ -0.82
SMC4-217ENST00000485867 ITSN1Q15811 1721 aa9.91□□□□□ -0.82
SMC4-217ENST00000485867 SHANK3Q9BYB0 1731 aa9.91□□□□□ -0.82
SMC4-217ENST00000485867 GIGYF1O75420 1035 aaPredicted RBP9.91□□□□□ -0.82
SMC4-217ENST00000485867 ERFEQ4G0M1 354 aa9.91□□□□□ -0.82
SMC4-217ENST00000485867 VASH1Q7L8A9 365 aaPredicted RBP9.91□□□□□ -0.82
SMC4-217ENST00000485867 SLC16A10Q8TF71 515 aa9.91□□□□□ -0.82
SMC4-217ENST00000485867 PRAM1Q96QH2 718 aa9.91□□□□□ -0.82
SMC4-217ENST00000485867 FKBPLQ9UIM3 349 aa9.91□□□□□ -0.82
SMC4-217ENST00000485867 LRRC37A3O60309 1634 aa9.91□□□□□ -0.82
SMC4-217ENST00000485867 OVOS2A0A0G2JMS6 1433 aa9.9□□□□□ -0.82
SMC4-217ENST00000485867 OVOS2A0A0J9YW53 1432 aa9.9□□□□□ -0.82
SMC4-217ENST00000485867 OVOS2Q6IE36 1432 aa9.9□□□□□ -0.82
SMC4-217ENST00000485867 PRR36Q9H6K5 1346 aa9.9□□□□□ -0.82
SMC4-217ENST00000485867 PLSCR1O15162 318 aa9.9□□□□□ -0.82
SMC4-217ENST00000485867 INSM1Q01101 510 aaPredicted RBP9.9□□□□□ -0.82
SMC4-217ENST00000485867 RGL3Q3MIN7 710 aa9.9□□□□□ -0.82
SMC4-217ENST00000485867 PDXDC2PQ6P474 469 aa9.9□□□□□ -0.82
SMC4-217ENST00000485867 CARD14Q9BXL6 1004 aa9.9□□□□□ -0.82
SMC4-217ENST00000485867 WNK3Q9BYP7 1800 aa9.9□□□□□ -0.82
SMC4-217ENST00000485867 DHX57Q6P158 1386 aaKnown RBP9.89□□□□□ -0.83
SMC4-217ENST00000485867 AKAP12Q02952 1782 aa9.89□□□□□ -0.83
SMC4-217ENST00000485867 H3BM21 787 aa9.89□□□□□ -0.83
SMC4-217ENST00000485867 VEGFBP49765 207 aa9.89□□□□□ -0.83
SMC4-217ENST00000485867 ZC3H6P61129 1189 aaKnown RBP9.89□□□□□ -0.83
SMC4-217ENST00000485867 LARP1Q6PKG0 1096 aaKnown RBP9.89□□□□□ -0.83
SMC4-217ENST00000485867 TCP11L2Q8N4U5 519 aa9.89□□□□□ -0.83
SMC4-217ENST00000485867 MEIOBQ8N635 442 aa9.89□□□□□ -0.83
SMC4-217ENST00000485867 ATP7BP35670 1465 aa9.89□□□□□ -0.83
SMC4-217ENST00000485867 EIF3AQ14152 1382 aaKnown RBP9.88□□□□□ -0.83
SMC4-217ENST00000485867 SOBPA7XYQ1 873 aa9.88□□□□□ -0.83
SMC4-217ENST00000485867 NR6A1Q15406 480 aa9.88□□□□□ -0.83
SMC4-217ENST00000485867 C14orf93Q9H972 538 aaKnown RBP9.88□□□□□ -0.83
SMC4-217ENST00000485867 MAP3K5Q99683 1374 aa9.88□□□□□ -0.83
SMC4-217ENST00000485867 ZC3H4Q9UPT8 1303 aaKnown RBP9.87□□□□□ -0.83
SMC4-217ENST00000485867 SLC24A1O60721 1099 aa9.87□□□□□ -0.83
SMC4-217ENST00000485867 EVA1CP58658 441 aa9.87□□□□□ -0.83
SMC4-217ENST00000485867 C6orf118Q5T5N4 469 aa9.87□□□□□ -0.83
SMC4-217ENST00000485867 CCDC116Q8IYX3 515 aa9.87□□□□□ -0.83
SMC4-217ENST00000485867 NGDNQ8NEJ9 315 aaKnown RBP9.87□□□□□ -0.83
SMC4-217ENST00000485867 ARHGAP9Q9BRR9 750 aa9.87□□□□□ -0.83
SMC4-217ENST00000485867 STK17AQ9UEE5 414 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms