RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 ADH7P40394 386 aa5.88□□□□□ -1.47
PRPF38B-205ENST00000485810 NBPF11Q86T75 865 aa5.88□□□□□ -1.47
PRPF38B-205ENST00000485810 ZNF280CQ8ND82 737 aa5.88□□□□□ -1.47
PRPF38B-205ENST00000485810 HSH2DQ96JZ2 352 aa5.88□□□□□ -1.47
PRPF38B-205ENST00000485810 NOD1Q9Y239 953 aa5.88□□□□□ -1.47
PRPF38B-205ENST00000485810 BTBD11A6QL63 1104 aa5.87□□□□□ -1.47
PRPF38B-205ENST00000485810 IGSF3O75054 1194 aa5.87□□□□□ -1.47
PRPF38B-205ENST00000485810 KCNQ4P56696 695 aa5.87□□□□□ -1.47
PRPF38B-205ENST00000485810 PSME1Q06323 249 aa5.87□□□□□ -1.47
PRPF38B-205ENST00000485810 TRIM28Q13263 835 aaKnown RBP5.87□□□□□ -1.47
PRPF38B-205ENST00000485810 ADGRE1Q14246 886 aa5.87□□□□□ -1.47
PRPF38B-205ENST00000485810 ARID3AQ99856 593 aa5.87□□□□□ -1.47
PRPF38B-205ENST00000485810 BCL11AQ9H165 835 aa5.87□□□□□ -1.47
PRPF38B-205ENST00000485810 GPC6Q9Y625 555 aaPredicted RBP5.87□□□□□ -1.47
PRPF38B-205ENST00000485810 SERTM1A2A2V5 107 aa5.86□□□□□ -1.47
PRPF38B-205ENST00000485810 TYRO3Q06418 890 aa5.86□□□□□ -1.47
PRPF38B-205ENST00000485810 PROSER2Q86WR7 435 aaPredicted RBP5.86□□□□□ -1.47
PRPF38B-205ENST00000485810 FNBP4Q8N3X1 1017 aaPredicted RBP5.86□□□□□ -1.47
PRPF38B-205ENST00000485810 NFATC2IPQ8NCF5 419 aa5.86□□□□□ -1.47
PRPF38B-205ENST00000485810 ZNF232Q9UNY5 417 aa5.86□□□□□ -1.47
PRPF38B-205ENST00000485810 HCN4Q9Y3Q4 1203 aa5.86□□□□□ -1.47
PRPF38B-205ENST00000485810 LZTS3O60299 673 aaPredicted RBP5.85□□□□□ -1.47
PRPF38B-205ENST00000485810 HIRAP54198 1017 aaPredicted RBP5.85□□□□□ -1.47
PRPF38B-205ENST00000485810 MBTPS1Q14703 1052 aa5.85□□□□□ -1.47
PRPF38B-205ENST00000485810 GLMNQ92990 594 aa5.85□□□□□ -1.47
PRPF38B-205ENST00000485810 ZMYND15Q9H091 742 aa5.85□□□□□ -1.47
PRPF38B-205ENST00000485810 TSPAN10Q9H1Z9 355 aaPredicted RBP5.85□□□□□ -1.47
PRPF38B-205ENST00000485810 ZFP64Q9NPA5 681 aa5.85□□□□□ -1.47
PRPF38B-205ENST00000485810 TOP2AP11388 1531 aaKnown RBP5.85□□□□□ -1.47
PRPF38B-205ENST00000485810 WIZO95785 1651 aa5.84□□□□□ -1.47
PRPF38B-205ENST00000485810 A0A0A0MRY4 1105 aa5.84□□□□□ -1.47
PRPF38B-205ENST00000485810 USP17L3A6NCW0 530 aa5.84□□□□□ -1.47
PRPF38B-205ENST00000485810 USP17L4A6NCW7 530 aa5.84□□□□□ -1.47
PRPF38B-205ENST00000485810 SFI1A8K8P3 1242 aa5.84□□□□□ -1.47
PRPF38B-205ENST00000485810 DKK1O94907 266 aa5.84□□□□□ -1.47
PRPF38B-205ENST00000485810 NEFLP07196 543 aa5.84□□□□□ -1.47
PRPF38B-205ENST00000485810 CLDN10P78369 228 aa5.84□□□□□ -1.47
PRPF38B-205ENST00000485810 TAF7LQ5H9L4 462 aa5.84□□□□□ -1.47
PRPF38B-205ENST00000485810 C1orf53Q5VUE5 145 aa5.84□□□□□ -1.47
PRPF38B-205ENST00000485810 USP17L2Q6R6M4 530 aa5.84□□□□□ -1.47
PRPF38B-205ENST00000485810 SHISA2Q6UWI4 295 aa5.84□□□□□ -1.47
PRPF38B-205ENST00000485810 USP17L1Q7RTZ2 530 aa5.84□□□□□ -1.47
PRPF38B-205ENST00000485810 RHPN1Q8TCX5 695 aa5.84□□□□□ -1.47
PRPF38B-205ENST00000485810 PHACTR1Q9C0D0 580 aa5.84□□□□□ -1.47
PRPF38B-205ENST00000485810 BRD7Q9NPI1 651 aa5.84□□□□□ -1.47
PRPF38B-205ENST00000485810 TFIP11Q9UBB9 837 aaKnown RBP5.84□□□□□ -1.47
PRPF38B-205ENST00000485810 KCNH4Q9UQ05 1017 aa5.84□□□□□ -1.47
PRPF38B-205ENST00000485810 C21orf2O43822 256 aa5.83□□□□□ -1.48
PRPF38B-205ENST00000485810 ATP9BO43861 1147 aa5.83□□□□□ -1.48
PRPF38B-205ENST00000485810 H2AFB1P0C5Y9 115 aa5.83□□□□□ -1.48
PRPF38B-205ENST00000485810 H2AFB2P0C5Z0 115 aa5.83□□□□□ -1.48
PRPF38B-205ENST00000485810 LCE3BQ5TA77 95 aa5.83□□□□□ -1.48
PRPF38B-205ENST00000485810 SUSD3Q96L08 255 aa5.83□□□□□ -1.48
PRPF38B-205ENST00000485810 CEP63Q96MT8 703 aa5.83□□□□□ -1.48
PRPF38B-205ENST00000485810 NACC1Q96RE7 527 aa5.83□□□□□ -1.48
PRPF38B-205ENST00000485810 POLR3GLQ9BT43 218 aa5.83□□□□□ -1.48
PRPF38B-205ENST00000485810 SSBP4Q9BWG4 385 aaPredicted RBP5.83□□□□□ -1.48
PRPF38B-205ENST00000485810 MKRN1Q9UHC7 482 aaKnown RBP5.83□□□□□ -1.48
PRPF38B-205ENST00000485810 C9orf172C9J069 976 aa5.82□□□□□ -1.48
PRPF38B-205ENST00000485810 PDE4CQ08493 712 aa5.82□□□□□ -1.48
PRPF38B-205ENST00000485810 TRAPPC3LQ5T215 181 aa5.82□□□□□ -1.48
PRPF38B-205ENST00000485810 TPCN2Q8NHX9 752 aa5.82□□□□□ -1.48
PRPF38B-205ENST00000485810 NEUROD4Q9HD90 331 aa5.82□□□□□ -1.48
PRPF38B-205ENST00000485810 HYAL3O43820 417 aaPredicted RBP5.81□□□□□ -1.48
PRPF38B-205ENST00000485810 LILRB5O75023 590 aa5.81□□□□□ -1.48
PRPF38B-205ENST00000485810 LGR5O75473 907 aa5.81□□□□□ -1.48
PRPF38B-205ENST00000485810 GRNP28799 593 aaKnown RBP5.81□□□□□ -1.48
PRPF38B-205ENST00000485810 PSMA6P60900 246 aaKnown RBP5.81□□□□□ -1.48
PRPF38B-205ENST00000485810 CCDC102BQ68D86 513 aa5.81□□□□□ -1.48
PRPF38B-205ENST00000485810 KRTAP19-1Q8IUB9 90 aa5.81□□□□□ -1.48
PRPF38B-205ENST00000485810 OGFOD1Q8N543 542 aa5.81□□□□□ -1.48
PRPF38B-205ENST00000485810 BHMTQ93088 406 aa5.81□□□□□ -1.48
PRPF38B-205ENST00000485810 LENG1Q96BZ8 264 aaPredicted RBP5.81□□□□□ -1.48
PRPF38B-205ENST00000485810 ZNF594Q96JF6 807 aaPredicted RBP5.81□□□□□ -1.48
PRPF38B-205ENST00000485810 NAGPAQ9UK23 515 aa5.81□□□□□ -1.48
PRPF38B-205ENST00000485810 ZNF777Q9ULD5 760 aaPredicted RBP5.81□□□□□ -1.48
PRPF38B-205ENST00000485810 SLC6A14Q9UN76 642 aa5.81□□□□□ -1.48
PRPF38B-205ENST00000485810 SMARCA4P51532 1647 aa5.81□□□□□ -1.48
PRPF38B-205ENST00000485810 WRNQ14191 1432 aaPredicted RBP eCLIP5.81□□□□□ -1.48
PRPF38B-205ENST00000485810 ELNP15502 786 aa5.8□□□□□ -1.48
PRPF38B-205ENST00000485810 AFF1P51825 1210 aaKnown RBP5.8□□□□□ -1.48
PRPF38B-205ENST00000485810 TXNRD3Q86VQ6 643 aa5.8□□□□□ -1.48
PRPF38B-205ENST00000485810 PLEKHM2Q8IWE5 1019 aa5.8□□□□□ -1.48
PRPF38B-205ENST00000485810 FAM9AQ8IZU1 332 aaPredicted RBP5.8□□□□□ -1.48
PRPF38B-205ENST00000485810 GAS2L2Q8NHY3 880 aa5.8□□□□□ -1.48
PRPF38B-205ENST00000485810 CALR3Q96L12 384 aaKnown RBP5.8□□□□□ -1.48
PRPF38B-205ENST00000485810 KRTAP9-9Q9BYP9 154 aa5.8□□□□□ -1.48
PRPF38B-205ENST00000485810 KRTAP9-4Q9BYQ2 154 aa5.8□□□□□ -1.48
PRPF38B-205ENST00000485810 EEA1Q15075 1411 aa5.8□□□□□ -1.48
PRPF38B-205ENST00000485810 PALM3A6NDB9 673 aaPredicted RBP5.8□□□□□ -1.48
PRPF38B-205ENST00000485810 NRG1Q02297 640 aaPredicted RBP5.8□□□□□ -1.48
PRPF38B-205ENST00000485810 LRP8Q14114 963 aa5.8□□□□□ -1.48
PRPF38B-205ENST00000485810 NUDT8Q8WV74 236 aa5.8□□□□□ -1.48
PRPF38B-205ENST00000485810 GSX2Q9BZM3 304 aa5.8□□□□□ -1.48
PRPF38B-205ENST00000485810 ANKIB1Q9P2G1 1089 aa5.8□□□□□ -1.48
PRPF38B-205ENST00000485810 PEG3Q9GZU2 1588 aa5.8□□□□□ -1.48
PRPF38B-205ENST00000485810 SMARCA2P51531 1590 aa5.79□□□□□ -1.48
PRPF38B-205ENST00000485810 A6NJR5 290 aa5.79□□□□□ -1.48
PRPF38B-205ENST00000485810 M0R2N6 131 aa5.79□□□□□ -1.48
PRPF38B-205ENST00000485810 PLAURQ03405 335 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms