RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 DDX21Q9NR30 783 aaKnown RBP eCLIP13.74□□□□□ -0.21
DDX56-212ENST00000485367 ZBTB47Q9UFB7 747 aaPredicted RBP13.74□□□□□ -0.21
DDX56-212ENST00000485367 UBN2Q6ZU65 1347 aa13.74□□□□□ -0.21
DDX56-212ENST00000485367 ARFGEF2Q9Y6D5 1785 aa13.74□□□□□ -0.21
DDX56-212ENST00000485367 ABCC12Q96J65 1359 aa13.73□□□□□ -0.21
DDX56-212ENST00000485367 KDM2BQ8NHM5 1336 aa13.73□□□□□ -0.21
DDX56-212ENST00000485367 DUSP27Q5VZP5 1158 aa13.73□□□□□ -0.21
DDX56-212ENST00000485367 CHPF2Q9P2E5 772 aa13.73□□□□□ -0.21
DDX56-212ENST00000485367 FER1L6Q2WGJ9 1857 aa13.73□□□□□ -0.21
DDX56-212ENST00000485367 ZNF853P0CG23 659 aa13.73□□□□□ -0.21
DDX56-212ENST00000485367 GNAI1P63096 354 aa13.73□□□□□ -0.21
DDX56-212ENST00000485367 SOGA3Q5TF21 947 aa13.73□□□□□ -0.21
DDX56-212ENST00000485367 CCDC136Q96JN2 1154 aa13.73□□□□□ -0.21
DDX56-212ENST00000485367 IFT57Q9NWB7 429 aa13.73□□□□□ -0.21
DDX56-212ENST00000485367 TNRC6CQ9HCJ0 1690 aaKnown RBP13.72□□□□□ -0.21
DDX56-212ENST00000485367 HOXB7P09629 217 aa13.72□□□□□ -0.21
DDX56-212ENST00000485367 PARP10Q53GL7 1025 aa13.72□□□□□ -0.21
DDX56-212ENST00000485367 PPP1R42Q7Z4L9 355 aa13.72□□□□□ -0.21
DDX56-212ENST00000485367 TAOK3Q9H2K8 898 aa13.72□□□□□ -0.21
DDX56-212ENST00000485367 SALL2Q9Y467 1007 aaPredicted RBP13.72□□□□□ -0.21
DDX56-212ENST00000485367 IBTKQ9P2D0 1353 aaPredicted RBP13.71□□□□□ -0.21
DDX56-212ENST00000485367 C7orf43Q8WVR3 580 aa13.71□□□□□ -0.21
DDX56-212ENST00000485367 RRAGCQ9HB90 399 aa13.71□□□□□ -0.21
DDX56-212ENST00000485367 TIAM2Q8IVF5 1701 aa13.71□□□□□ -0.21
DDX56-212ENST00000485367 ZC3H4Q9UPT8 1303 aaKnown RBP13.71□□□□□ -0.22
DDX56-212ENST00000485367 ELL2O00472 640 aaPredicted RBP13.71□□□□□ -0.22
DDX56-212ENST00000485367 NTSR2O95665 410 aa13.71□□□□□ -0.22
DDX56-212ENST00000485367 ALDH1B1P30837 517 aa13.71□□□□□ -0.22
DDX56-212ENST00000485367 HSP90AB3PQ58FF7 597 aa13.71□□□□□ -0.22
DDX56-212ENST00000485367 RPGRQ92834 1020 aaKnown RBP13.71□□□□□ -0.22
DDX56-212ENST00000485367 UTP14AQ9BVJ6 771 aaKnown RBP13.71□□□□□ -0.22
DDX56-212ENST00000485367 DBF4Q9UBU7 674 aaPredicted RBP13.71□□□□□ -0.22
DDX56-212ENST00000485367 ANKRD36CQ5JPF3 1778 aa13.7□□□□□ -0.22
DDX56-212ENST00000485367 NBR1Q14596 966 aa13.7□□□□□ -0.22
DDX56-212ENST00000485367 CRY2Q49AN0 593 aa13.7□□□□□ -0.22
DDX56-212ENST00000485367 CCDC93Q567U6 631 aa13.7□□□□□ -0.22
DDX56-212ENST00000485367 OLFM4Q6UX06 510 aa13.7□□□□□ -0.22
DDX56-212ENST00000485367 C16orf71Q8IYS4 520 aaPredicted RBP13.7□□□□□ -0.22
DDX56-212ENST00000485367 DICER1Q9UPY3 1922 aaKnown RBP13.7□□□□□ -0.22
DDX56-212ENST00000485367 LTBP3Q9NS15 1303 aa13.69□□□□□ -0.22
DDX56-212ENST00000485367 TOMM70O94826 608 aa13.69□□□□□ -0.22
DDX56-212ENST00000485367 TCIRG1Q13488 830 aa13.69□□□□□ -0.22
DDX56-212ENST00000485367 GLTPD2A6NH11 291 aa13.68□□□□□ -0.22
DDX56-212ENST00000485367 ANKRD13DQ6ZTN6 518 aa13.68□□□□□ -0.22
DDX56-212ENST00000485367 C3orf67Q6ZVT6 689 aa13.68□□□□□ -0.22
DDX56-212ENST00000485367 NLRP10Q86W26 655 aa13.68□□□□□ -0.22
DDX56-212ENST00000485367 HYPKQ9NX55 129 aa13.68□□□□□ -0.22
DDX56-212ENST00000485367 RIC1Q4ADV7 1423 aa13.68□□□□□ -0.22
DDX56-212ENST00000485367 HOXA10P31260 410 aaPredicted RBP13.68□□□□□ -0.22
DDX56-212ENST00000485367 C8orf58Q8NAV2 365 aa13.68□□□□□ -0.22
DDX56-212ENST00000485367 PLBD2Q8NHP8 589 aa13.68□□□□□ -0.22
DDX56-212ENST00000485367 ZNF428Q96B54 188 aa13.68□□□□□ -0.22
DDX56-212ENST00000485367 NLRP3Q96P20 1036 aa13.68□□□□□ -0.22
DDX56-212ENST00000485367 HSPA6P17066 643 aa13.67□□□□□ -0.22
DDX56-212ENST00000485367 SLC10A5Q5PT55 438 aa13.67□□□□□ -0.22
DDX56-212ENST00000485367 RTKN2Q8IZC4 609 aa13.67□□□□□ -0.22
DDX56-212ENST00000485367 RBM17Q96I25 401 aaKnown RBP13.67□□□□□ -0.22
DDX56-212ENST00000485367 TRMT112Q9UI30 125 aaKnown RBP13.67□□□□□ -0.22
DDX56-212ENST00000485367 TCERG1O14776 1098 aaKnown RBP13.66□□□□□ -0.22
DDX56-212ENST00000485367 FKBP4Q02790 459 aaKnown RBP eCLIP13.66□□□□□ -0.22
DDX56-212ENST00000485367 DPY19L2Q6NUT2 758 aa13.66□□□□□ -0.22
DDX56-212ENST00000485367 WWC1Q8IX03 1113 aa13.66□□□□□ -0.22
DDX56-212ENST00000485367 ZNF277Q9NRM2 450 aaPredicted RBP13.66□□□□□ -0.22
DDX56-212ENST00000485367 HCLS1P14317 486 aaPredicted RBP13.66□□□□□ -0.22
DDX56-212ENST00000485367 CCDC27Q2M243 656 aa13.66□□□□□ -0.22
DDX56-212ENST00000485367 SYNE4Q8N205 404 aa13.66□□□□□ -0.22
DDX56-212ENST00000485367 RBM46Q8TBY0 533 aaKnown RBP13.66□□□□□ -0.22
DDX56-212ENST00000485367 TSR2Q969E8 191 aaKnown RBP13.66□□□□□ -0.22
DDX56-212ENST00000485367 CRAMP1Q96RY5 1269 aa13.66□□□□□ -0.22
DDX56-212ENST00000485367 ATP5J2-PTCD1G3V325 749 aa13.65□□□□□ -0.22
DDX56-212ENST00000485367 VEGFAP15692 232 aaPredicted RBP13.65□□□□□ -0.22
DDX56-212ENST00000485367 SH3TC1Q8TE82 1336 aa13.64□□□□□ -0.23
DDX56-212ENST00000485367 PPEF1O14829 653 aaPredicted RBP13.64□□□□□ -0.23
DDX56-212ENST00000485367 EIF5BO60841 1220 aaKnown RBP13.64□□□□□ -0.23
DDX56-212ENST00000485367 MS4A1P11836 297 aa13.64□□□□□ -0.23
DDX56-212ENST00000485367 GOLGA2Q08379 1002 aa13.64□□□□□ -0.23
DDX56-212ENST00000485367 CC2D2BQ6DHV5 1058 aa13.64□□□□□ -0.23
DDX56-212ENST00000485367 RIC3Q7Z5B4 369 aa13.64□□□□□ -0.23
DDX56-212ENST00000485367 TSPYL6Q8N831 410 aa13.64□□□□□ -0.23
DDX56-212ENST00000485367 ISCA1Q9BUE6 129 aa13.64□□□□□ -0.23
DDX56-212ENST00000485367 PHAXQ9H814 394 aaKnown RBP13.64□□□□□ -0.23
DDX56-212ENST00000485367 CCDC30Q5VVM6 783 aa13.63□□□□□ -0.23
DDX56-212ENST00000485367 CHMP4AQ9BY43 222 aa13.63□□□□□ -0.23
DDX56-212ENST00000485367 LAMB2P55268 1798 aa13.63□□□□□ -0.23
DDX56-212ENST00000485367 DDNO94850 711 aaPredicted RBP13.63□□□□□ -0.23
DDX56-212ENST00000485367 IARSP41252 1262 aaKnown RBP13.63□□□□□ -0.23
DDX56-212ENST00000485367 SLC51AQ86UW1 340 aa13.62□□□□□ -0.23
DDX56-212ENST00000485367 FAM89AQ96GI7 184 aa13.62□□□□□ -0.23
DDX56-212ENST00000485367 PSMD1Q99460 953 aa13.62□□□□□ -0.23
DDX56-212ENST00000485367 TMX4Q9H1E5 349 aaPredicted RBP13.62□□□□□ -0.23
DDX56-212ENST00000485367 ABCC4O15439 1325 aa13.62□□□□□ -0.23
DDX56-212ENST00000485367 IL16Q14005 1332 aa13.62□□□□□ -0.23
DDX56-212ENST00000485367 WDR90Q96KV7 1748 aa13.61□□□□□ -0.23
DDX56-212ENST00000485367 FSTL1Q12841 308 aa13.61□□□□□ -0.23
DDX56-212ENST00000485367 NCBP3Q53F19 620 aaKnown RBP13.61□□□□□ -0.23
DDX56-212ENST00000485367 DDX46Q7L014 1031 aaKnown RBP13.61□□□□□ -0.23
DDX56-212ENST00000485367 CEP350Q5VT06 3117 aa13.61□□□□□ -0.23
DDX56-212ENST00000485367 POTECB2RU33 542 aa13.6□□□□□ -0.23
DDX56-212ENST00000485367 TWISTNBQ3B726 338 aaPredicted RBP13.6□□□□□ -0.23
DDX56-212ENST00000485367 GRIPAP1Q4V328 841 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms