RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 PHRF1Q9P1Y6 1649 aaKnown RBP7.99□□□□□ -1.13
PTPN4-210ENST00000485247 ATP7BP35670 1465 aa7.99□□□□□ -1.13
PTPN4-210ENST00000485247 ZBTB7CA1YPR0 619 aa7.98□□□□□ -1.13
PTPN4-210ENST00000485247 PER1O15534 1290 aaPredicted RBP7.98□□□□□ -1.13
PTPN4-210ENST00000485247 PRELPP51888 382 aa7.98□□□□□ -1.13
PTPN4-210ENST00000485247 KCNH2Q12809 1159 aa7.98□□□□□ -1.13
PTPN4-210ENST00000485247 RTL5Q5HYW3 569 aaPredicted RBP7.98□□□□□ -1.13
PTPN4-210ENST00000485247 RC3H1Q5TC82 1133 aaKnown RBP7.98□□□□□ -1.13
PTPN4-210ENST00000485247 CYP4X1Q8N118 509 aa7.98□□□□□ -1.13
PTPN4-210ENST00000485247 CRB1P82279 1406 aa7.97□□□□□ -1.13
PTPN4-210ENST00000485247 LRRC37A3O60309 1634 aa7.97□□□□□ -1.13
PTPN4-210ENST00000485247 WASLO00401 505 aaPredicted RBP7.97□□□□□ -1.13
PTPN4-210ENST00000485247 F12P00748 615 aaPredicted RBP7.97□□□□□ -1.13
PTPN4-210ENST00000485247 ZNF827Q17R98 1081 aa7.97□□□□□ -1.13
PTPN4-210ENST00000485247 TOM1L2Q6ZVM7 507 aa7.97□□□□□ -1.13
PTPN4-210ENST00000485247 TNS4Q8IZW8 715 aa7.97□□□□□ -1.13
PTPN4-210ENST00000485247 DNAJC5GQ8N7S2 189 aa7.97□□□□□ -1.13
PTPN4-210ENST00000485247 COL5A2P05997 1499 aaPredicted RBP7.97□□□□□ -1.13
PTPN4-210ENST00000485247 TULP4Q9NRJ4 1543 aa7.97□□□□□ -1.13
PTPN4-210ENST00000485247 CPDO75976 1380 aa7.97□□□□□ -1.13
PTPN4-210ENST00000485247 EIF3AQ14152 1382 aaKnown RBP7.97□□□□□ -1.13
PTPN4-210ENST00000485247 SPATA31E1Q6ZUB1 1445 aa7.96□□□□□ -1.13
PTPN4-210ENST00000485247 LMO7Q8WWI1 1683 aa7.96□□□□□ -1.13
PTPN4-210ENST00000485247 ST8SIA5O15466 376 aa7.96□□□□□ -1.14
PTPN4-210ENST00000485247 SMPD1P17405 629 aa7.96□□□□□ -1.14
PTPN4-210ENST00000485247 SH3BP2P78314 561 aa7.96□□□□□ -1.14
PTPN4-210ENST00000485247 ABTB2Q8N961 1025 aa7.96□□□□□ -1.14
PTPN4-210ENST00000485247 SNIP1Q8TAD8 396 aaKnown RBP7.96□□□□□ -1.14
PTPN4-210ENST00000485247 RSPH6AQ9H0K4 717 aa7.96□□□□□ -1.14
PTPN4-210ENST00000485247 MAP10Q9P2G4 905 aa7.96□□□□□ -1.14
PTPN4-210ENST00000485247 TRAK1Q9UPV9 953 aa7.96□□□□□ -1.14
PTPN4-210ENST00000485247 TTC24A2A3L6 582 aaPredicted RBP7.95□□□□□ -1.14
PTPN4-210ENST00000485247 J3QL48 77 aa7.95□□□□□ -1.14
PTPN4-210ENST00000485247 AVPP01185 164 aa7.95□□□□□ -1.14
PTPN4-210ENST00000485247 GCP02774 474 aa7.95□□□□□ -1.14
PTPN4-210ENST00000485247 LINC01559Q495D7 138 aa7.95□□□□□ -1.14
PTPN4-210ENST00000485247 SH3D19Q5HYK7 790 aa7.95□□□□□ -1.14
PTPN4-210ENST00000485247 BAP1Q92560 729 aa7.95□□□□□ -1.14
PTPN4-210ENST00000485247 ACSBG1Q96GR2 724 aa7.95□□□□□ -1.14
PTPN4-210ENST00000485247 AAASQ9NRG9 546 aa7.95□□□□□ -1.14
PTPN4-210ENST00000485247 AATKQ6ZMQ8 1374 aa7.95□□□□□ -1.14
PTPN4-210ENST00000485247 BCL9O00512 1426 aa7.95□□□□□ -1.14
PTPN4-210ENST00000485247 GOLGB1Q14789 3259 aaKnown RBP7.94□□□□□ -1.14
PTPN4-210ENST00000485247 PROCA1Q8NCQ7 364 aaPredicted RBP7.94□□□□□ -1.14
PTPN4-210ENST00000485247 SLC16A10Q8TF71 515 aa7.94□□□□□ -1.14
PTPN4-210ENST00000485247 TSC1Q92574 1164 aa7.94□□□□□ -1.14
PTPN4-210ENST00000485247 NUDT16Q96DE0 195 aaKnown RBP7.94□□□□□ -1.14
PTPN4-210ENST00000485247 DDRGK1Q96HY6 314 aa7.94□□□□□ -1.14
PTPN4-210ENST00000485247 EXOC5O00471 708 aa7.93□□□□□ -1.14
PTPN4-210ENST00000485247 SIAH2O43255 324 aa7.93□□□□□ -1.14
PTPN4-210ENST00000485247 CTHP32929 405 aa7.93□□□□□ -1.14
PTPN4-210ENST00000485247 SKIV2LQ15477 1246 aaKnown RBP7.93□□□□□ -1.14
PTPN4-210ENST00000485247 CRIPAKQ8N1N5 446 aa7.93□□□□□ -1.14
PTPN4-210ENST00000485247 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.93□□□□□ -1.14
PTPN4-210ENST00000485247 LRRC4BQ9NT99 713 aa7.93□□□□□ -1.14
PTPN4-210ENST00000485247 USP19O94966 1318 aa7.93□□□□□ -1.14
PTPN4-210ENST00000485247 ACEP12821 1306 aa7.93□□□□□ -1.14
PTPN4-210ENST00000485247 ADCY9O60503 1353 aa7.93□□□□□ -1.14
PTPN4-210ENST00000485247 PAPPAQ13219 1627 aa7.92□□□□□ -1.14
PTPN4-210ENST00000485247 TOPAZ1Q8N9V7 1692 aa7.92□□□□□ -1.14
PTPN4-210ENST00000485247 NLRP13Q86W25 1043 aa7.92□□□□□ -1.14
PTPN4-210ENST00000485247 ZNF511Q8NB15 262 aa7.92□□□□□ -1.14
PTPN4-210ENST00000485247 CDCA7Q9BWT1 371 aaPredicted RBP7.92□□□□□ -1.14
PTPN4-210ENST00000485247 PNPLA7Q6ZV29 1317 aa7.92□□□□□ -1.14
PTPN4-210ENST00000485247 AKAP12Q02952 1782 aa7.92□□□□□ -1.14
PTPN4-210ENST00000485247 POTECB2RU33 542 aa7.91□□□□□ -1.14
PTPN4-210ENST00000485247 HTRA3P83110 453 aa7.91□□□□□ -1.14
PTPN4-210ENST00000485247 EHBP1Q8NDI1 1231 aa7.91□□□□□ -1.14
PTPN4-210ENST00000485247 TFCP2L1Q9NZI6 479 aa7.91□□□□□ -1.14
PTPN4-210ENST00000485247 DACH1Q9UI36 760 aa7.91□□□□□ -1.14
PTPN4-210ENST00000485247 POLR3AO14802 1390 aaPredicted RBP7.9□□□□□ -1.14
PTPN4-210ENST00000485247 WDR17Q8IZU2 1322 aa7.9□□□□□ -1.14
PTPN4-210ENST00000485247 CSB-PGBD3P0DP91 1061 aa7.9□□□□□ -1.14
PTPN4-210ENST00000485247 TPRNQ4KMQ1 711 aa7.9□□□□□ -1.14
PTPN4-210ENST00000485247 PPARGC1BQ86YN6 1023 aaKnown RBP7.9□□□□□ -1.14
PTPN4-210ENST00000485247 HPS1Q92902 700 aa7.9□□□□□ -1.14
PTPN4-210ENST00000485247 KLRG1Q96E93 195 aa7.9□□□□□ -1.14
PTPN4-210ENST00000485247 WWC3Q9ULE0 1092 aa7.9□□□□□ -1.14
PTPN4-210ENST00000485247 USP6P35125 1406 aa7.89□□□□□ -1.15
PTPN4-210ENST00000485247 BRD4O60885 1362 aaPredicted RBP7.89□□□□□ -1.15
PTPN4-210ENST00000485247 TOMM70O94826 608 aa7.89□□□□□ -1.15
PTPN4-210ENST00000485247 SMCPP49901 116 aaPredicted RBP7.89□□□□□ -1.15
PTPN4-210ENST00000485247 BRPF1P55201 1214 aaPredicted RBP7.89□□□□□ -1.15
PTPN4-210ENST00000485247 KCNQ4P56696 695 aa7.89□□□□□ -1.15
PTPN4-210ENST00000485247 CTDSPL2Q05D32 466 aa7.89□□□□□ -1.15
PTPN4-210ENST00000485247 NEUROD2Q15784 382 aa7.89□□□□□ -1.15
PTPN4-210ENST00000485247 ZNF787Q6DD87 383 aa7.89□□□□□ -1.15
PTPN4-210ENST00000485247 JMYQ8N9B5 988 aa7.89□□□□□ -1.15
PTPN4-210ENST00000485247 HELBQ8NG08 1087 aaPredicted RBP7.89□□□□□ -1.15
PTPN4-210ENST00000485247 CDK19Q9BWU1 502 aa7.89□□□□□ -1.15
PTPN4-210ENST00000485247 TLL2Q9Y6L7 1015 aa7.89□□□□□ -1.15
PTPN4-210ENST00000485247 ITSN1Q15811 1721 aa7.89□□□□□ -1.15
PTPN4-210ENST00000485247 ALDH1A1P00352 501 aa7.88□□□□□ -1.15
PTPN4-210ENST00000485247 CTC1Q2NKJ3 1217 aa7.88□□□□□ -1.15
PTPN4-210ENST00000485247 PPP2R2DQ66LE6 453 aa7.88□□□□□ -1.15
PTPN4-210ENST00000485247 MSL1Q68DK7 614 aa7.88□□□□□ -1.15
PTPN4-210ENST00000485247 FOXJ1Q92949 421 aa7.88□□□□□ -1.15
PTPN4-210ENST00000485247 CARD10Q9BWT7 1032 aa7.88□□□□□ -1.15
PTPN4-210ENST00000485247 COL24A1Q17RW2 1714 aa7.88□□□□□ -1.15
PTPN4-210ENST00000485247 ADGRB1O14514 1584 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms