RNA–Protein interactions for RNA: ENST00000484141.5

PCGF3-211, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-211ENST00000484141 ZNF34Q8IZ26 560 aa21.81■■□□□ 1.08
PCGF3-211ENST00000484141 CNKSR1Q969H4 720 aa21.81■■□□□ 1.08
PCGF3-211ENST00000484141 TAOK3Q9H2K8 898 aa21.81■■□□□ 1.08
PCGF3-211ENST00000484141 MBIPQ9NS73 344 aa21.81■■□□□ 1.08
PCGF3-211ENST00000484141 DDNO94850 711 aaPredicted RBP21.8■■□□□ 1.08
PCGF3-211ENST00000484141 GTF2E1P29083 439 aaPredicted RBP21.8■■□□□ 1.08
PCGF3-211ENST00000484141 C3orf67Q6ZVT6 689 aa21.8■■□□□ 1.08
PCGF3-211ENST00000484141 XAGE3Q8WTP9 111 aa21.8■■□□□ 1.08
PCGF3-211ENST00000484141 C7orf43Q8WVR3 580 aa21.8■■□□□ 1.08
PCGF3-211ENST00000484141 FOXN1O15353 648 aa21.79■■□□□ 1.08
PCGF3-211ENST00000484141 NPR1P16066 1061 aa21.79■■□□□ 1.08
PCGF3-211ENST00000484141 CHPF2Q9P2E5 772 aa21.79■■□□□ 1.08
PCGF3-211ENST00000484141 LTBP3Q9NS15 1303 aa21.79■■□□□ 1.08
PCGF3-211ENST00000484141 CNTNAP1P78357 1384 aa21.78■■□□□ 1.08
PCGF3-211ENST00000484141 NTSR2O95665 410 aa21.78■■□□□ 1.08
PCGF3-211ENST00000484141 ZNF853P0CG23 659 aa21.78■■□□□ 1.08
PCGF3-211ENST00000484141 CFAP44Q96MT7 982 aa21.78■■□□□ 1.08
PCGF3-211ENST00000484141 DICER1Q9UPY3 1922 aaKnown RBP21.78■■□□□ 1.08
PCGF3-211ENST00000484141 DUSP27Q5VZP5 1158 aa21.76■■□□□ 1.07
PCGF3-211ENST00000484141 SYNE4Q8N205 404 aa21.76■■□□□ 1.07
PCGF3-211ENST00000484141 AIDAQ96BJ3 306 aa21.76■■□□□ 1.07
PCGF3-211ENST00000484141 PRDM10Q9NQV6 1147 aa21.76■■□□□ 1.07
PCGF3-211ENST00000484141 DDX21Q9NR30 783 aaKnown RBP eCLIP21.76■■□□□ 1.07
PCGF3-211ENST00000484141 ANKRD36CQ5JPF3 1778 aa21.76■■□□□ 1.07
PCGF3-211ENST00000484141 IQCA1LA6NCM1 817 aa21.75■■□□□ 1.07
PCGF3-211ENST00000484141 ELL2O00472 640 aaPredicted RBP21.75■■□□□ 1.07
PCGF3-211ENST00000484141 HDGFL1Q5TGJ6 251 aa21.75■■□□□ 1.07
PCGF3-211ENST00000484141 LDHDQ86WU2 507 aa21.75■■□□□ 1.07
PCGF3-211ENST00000484141 NYXQ9GZU5 481 aa21.75■■□□□ 1.07
PCGF3-211ENST00000484141 CTCFP49711 727 aaPredicted RBP21.74■■□□□ 1.07
PCGF3-211ENST00000484141 CRY2Q49AN0 593 aa21.74■■□□□ 1.07
PCGF3-211ENST00000484141 SOGA3Q5TF21 947 aa21.74■■□□□ 1.07
PCGF3-211ENST00000484141 PASKQ96RG2 1323 aa21.73■■□□□ 1.07
PCGF3-211ENST00000484141 C8orf58Q8NAV2 365 aa21.72■■□□□ 1.07
PCGF3-211ENST00000484141 TAF1DQ9H5J8 278 aaPredicted RBP21.72■■□□□ 1.07
PCGF3-211ENST00000484141 LAMB2P55268 1798 aa21.71■■□□□ 1.07
PCGF3-211ENST00000484141 TCERG1O14776 1098 aaKnown RBP21.71■■□□□ 1.07
PCGF3-211ENST00000484141 VEGFBP49765 207 aa21.71■■□□□ 1.07
PCGF3-211ENST00000484141 CCDC93Q567U6 631 aa21.71■■□□□ 1.07
PCGF3-211ENST00000484141 ZNF277Q9NRM2 450 aaPredicted RBP21.71■■□□□ 1.07
PCGF3-211ENST00000484141 IFT57Q9NWB7 429 aa21.71■■□□□ 1.07
PCGF3-211ENST00000484141 IBTKQ9P2D0 1353 aaPredicted RBP21.71■■□□□ 1.07
PCGF3-211ENST00000484141 TMEM88BA6NKF7 163 aa21.7■■□□□ 1.06
PCGF3-211ENST00000484141 TCIRG1Q13488 830 aa21.7■■□□□ 1.06
PCGF3-211ENST00000484141 PPP1R42Q7Z4L9 355 aa21.7■■□□□ 1.06
PCGF3-211ENST00000484141 NLRP10Q86W26 655 aa21.7■■□□□ 1.06
PCGF3-211ENST00000484141 L3MBTL3Q96JM7 780 aaPredicted RBP21.7■■□□□ 1.06
PCGF3-211ENST00000484141 UTP14AQ9BVJ6 771 aaKnown RBP21.7■■□□□ 1.06
PCGF3-211ENST00000484141 MRS2Q9HD23 443 aa21.7■■□□□ 1.06
PCGF3-211ENST00000484141 TAF1P21675 1872 aa21.69■■□□□ 1.06
PCGF3-211ENST00000484141 PARP10Q53GL7 1025 aa21.69■■□□□ 1.06
PCGF3-211ENST00000484141 EAPPQ56P03 285 aaPredicted RBP21.69■■□□□ 1.06
PCGF3-211ENST00000484141 TSPYL6Q8N831 410 aa21.69■■□□□ 1.06
PCGF3-211ENST00000484141 TSR2Q969E8 191 aaKnown RBP21.69■■□□□ 1.06
PCGF3-211ENST00000484141 SNED1Q8TER0 1413 aa21.69■■□□□ 1.06
PCGF3-211ENST00000484141 ANP32CO43423 234 aa21.68■■□□□ 1.06
PCGF3-211ENST00000484141 HOXB7P09629 217 aa21.68■■□□□ 1.06
PCGF3-211ENST00000484141 HCLS1P14317 486 aaPredicted RBP21.68■■□□□ 1.06
PCGF3-211ENST00000484141 ALDH1B1P30837 517 aa21.68■■□□□ 1.06
PCGF3-211ENST00000484141 GNAI1P63096 354 aa21.68■■□□□ 1.06
PCGF3-211ENST00000484141 RPGRQ92834 1020 aaKnown RBP21.68■■□□□ 1.06
PCGF3-211ENST00000484141 PHAXQ9H814 394 aaKnown RBP21.68■■□□□ 1.06
PCGF3-211ENST00000484141 RIC1Q4ADV7 1423 aa21.68■■□□□ 1.06
PCGF3-211ENST00000484141 ATP5J2-PTCD1G3V325 749 aa21.67■■□□□ 1.06
PCGF3-211ENST00000484141 HOXA10P31260 410 aaPredicted RBP21.67■■□□□ 1.06
PCGF3-211ENST00000484141 LBX1P52954 281 aa21.67■■□□□ 1.06
PCGF3-211ENST00000484141 FKBP4Q02790 459 aaKnown RBP eCLIP21.67■■□□□ 1.06
PCGF3-211ENST00000484141 DBF4Q9UBU7 674 aaPredicted RBP21.67■■□□□ 1.06
PCGF3-211ENST00000484141 ITGBL1O95965 494 aaPredicted RBP21.66■■□□□ 1.06
PCGF3-211ENST00000484141 SLC10A5Q5PT55 438 aa21.66■■□□□ 1.06
PCGF3-211ENST00000484141 ANKRD13DQ6ZTN6 518 aa21.66■■□□□ 1.06
PCGF3-211ENST00000484141 PLBD2Q8NHP8 589 aa21.66■■□□□ 1.06
PCGF3-211ENST00000484141 WBP1LQ9NX94 342 aa21.66■■□□□ 1.06
PCGF3-211ENST00000484141 CLEC11AQ9Y240 323 aa21.66■■□□□ 1.06
PCGF3-211ENST00000484141 SALL2Q9Y467 1007 aaPredicted RBP21.66■■□□□ 1.06
PCGF3-211ENST00000484141 COL4A5P29400 1685 aa21.66■■□□□ 1.06
PCGF3-211ENST00000484141 TRMT112Q9UI30 125 aaKnown RBP21.65■■□□□ 1.06
PCGF3-211ENST00000484141 HACL1Q9UJ83 578 aa21.65■■□□□ 1.06
PCGF3-211ENST00000484141 DDX60Q8IY21 1712 aaKnown RBP21.64■■□□□ 1.06
PCGF3-211ENST00000484141 ZNF541Q9H0D2 1346 aa21.64■■□□□ 1.05
PCGF3-211ENST00000484141 HSP90AB3PQ58FF7 597 aa21.64■■□□□ 1.05
PCGF3-211ENST00000484141 WWC1Q8IX03 1113 aa21.64■■□□□ 1.05
PCGF3-211ENST00000484141 RBM17Q96I25 401 aaKnown RBP21.64■■□□□ 1.05
PCGF3-211ENST00000484141 NLRP3Q96P20 1036 aa21.64■■□□□ 1.05
PCGF3-211ENST00000484141 ISCA1Q9BUE6 129 aa21.64■■□□□ 1.05
PCGF3-211ENST00000484141 EPHX2P34913 555 aa21.63■■□□□ 1.05
PCGF3-211ENST00000484141 RTL5Q5HYW3 569 aaPredicted RBP21.63■■□□□ 1.05
PCGF3-211ENST00000484141 RTKN2Q8IZC4 609 aa21.63■■□□□ 1.05
PCGF3-211ENST00000484141 CRAMP1Q96RY5 1269 aa21.63■■□□□ 1.05
PCGF3-211ENST00000484141 HYPKQ9NX55 129 aa21.63■■□□□ 1.05
PCGF3-211ENST00000484141 COL4A1P02462 1669 aa21.63■■□□□ 1.05
PCGF3-211ENST00000484141 SCN4AP35499 1836 aa21.62■■□□□ 1.05
PCGF3-211ENST00000484141 ABCC4O15439 1325 aa21.62■■□□□ 1.05
PCGF3-211ENST00000484141 PPEF1O14829 653 aaPredicted RBP21.62■■□□□ 1.05
PCGF3-211ENST00000484141 CALD1Q05682 793 aaKnown RBP21.62■■□□□ 1.05
PCGF3-211ENST00000484141 FAM89AQ96GI7 184 aa21.62■■□□□ 1.05
PCGF3-211ENST00000484141 RASSF10A6NK89 507 aa21.61■■□□□ 1.05
PCGF3-211ENST00000484141 IARSP41252 1262 aaKnown RBP21.61■■□□□ 1.05
PCGF3-211ENST00000484141 DEFB115Q30KQ5 88 aa21.61■■□□□ 1.05
PCGF3-211ENST00000484141 SH3TC1Q8TE82 1336 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms