RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 ANKRD36CQ5JPF3 1778 aa12.57□□□□□ -0.4
HDAC6-226ENST00000483656 SMARCA5O60264 1052 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-226ENST00000483656 TSHZ2Q9NRE2 1034 aa12.57□□□□□ -0.4
HDAC6-226ENST00000483656 EXOC6BQ9Y2D4 811 aa12.57□□□□□ -0.4
HDAC6-226ENST00000483656 UBN2Q6ZU65 1347 aa12.57□□□□□ -0.4
HDAC6-226ENST00000483656 GNPATO15228 680 aa12.56□□□□□ -0.4
HDAC6-226ENST00000483656 PCCAP05165 728 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-226ENST00000483656 RFX5P48382 616 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-226ENST00000483656 RTL5Q5HYW3 569 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-226ENST00000483656 SLC27A3Q5K4L6 730 aa12.56□□□□□ -0.4
HDAC6-226ENST00000483656 NPM2Q86SE8 214 aaKnown RBP12.56□□□□□ -0.4
HDAC6-226ENST00000483656 C16orf71Q8IYS4 520 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-226ENST00000483656 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
HDAC6-226ENST00000483656 NOP58Q9Y2X3 529 aaKnown RBP12.56□□□□□ -0.4
HDAC6-226ENST00000483656 EP400Q96L91 3159 aa12.56□□□□□ -0.4
HDAC6-226ENST00000483656 BCORQ6W2J9 1755 aa12.56□□□□□ -0.4
HDAC6-226ENST00000483656 APBB1O00213 710 aa12.55□□□□□ -0.4
HDAC6-226ENST00000483656 PLSCR1O15162 318 aa12.55□□□□□ -0.4
HDAC6-226ENST00000483656 TXNRD1Q16881 649 aa12.55□□□□□ -0.4
HDAC6-226ENST00000483656 SYNE4Q8N205 404 aa12.55□□□□□ -0.4
HDAC6-226ENST00000483656 ZBTB38Q8NAP3 1195 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-226ENST00000483656 FAM89AQ96GI7 184 aa12.55□□□□□ -0.4
HDAC6-226ENST00000483656 PA2G4Q9UQ80 394 aaKnown RBP12.55□□□□□ -0.4
HDAC6-226ENST00000483656 RGL2O15211 777 aa12.54□□□□□ -0.4
HDAC6-226ENST00000483656 SURF6O75683 361 aaKnown RBP12.54□□□□□ -0.4
HDAC6-226ENST00000483656 APBA3O96018 575 aa12.54□□□□□ -0.4
HDAC6-226ENST00000483656 SUSD4Q5VX71 490 aa12.54□□□□□ -0.4
HDAC6-226ENST00000483656 LMBR1LQ6UX01 489 aa12.54□□□□□ -0.4
HDAC6-226ENST00000483656 CLEC4GQ6UXB4 293 aa12.54□□□□□ -0.4
HDAC6-226ENST00000483656 OTUD7AQ8TE49 926 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-226ENST00000483656 ARHGEF1Q92888 912 aaKnown RBP12.54□□□□□ -0.4
HDAC6-226ENST00000483656 PLA2G12BQ9BX93 195 aa12.54□□□□□ -0.4
HDAC6-226ENST00000483656 SRP68Q9UHB9 627 aaKnown RBP12.54□□□□□ -0.4
HDAC6-226ENST00000483656 NARFQ9UHQ1 456 aa12.54□□□□□ -0.4
HDAC6-226ENST00000483656 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
HDAC6-226ENST00000483656 CDHR2Q9BYE9 1310 aa12.54□□□□□ -0.4
HDAC6-226ENST00000483656 TNS1Q9HBL0 1735 aaKnown RBP12.54□□□□□ -0.4
HDAC6-226ENST00000483656 RAB11FIP3O75154 756 aa12.53□□□□□ -0.4
HDAC6-226ENST00000483656 USPL1Q5W0Q7 1092 aa12.53□□□□□ -0.4
HDAC6-226ENST00000483656 SCN7AQ01118 1682 aa12.53□□□□□ -0.4
HDAC6-226ENST00000483656 CSF1RP07333 972 aa12.52□□□□□ -0.41
HDAC6-226ENST00000483656 PTPN12Q05209 780 aaKnown RBP12.52□□□□□ -0.41
HDAC6-226ENST00000483656 PLEKHM2Q8IWE5 1019 aa12.52□□□□□ -0.41
HDAC6-226ENST00000483656 KLHDC4Q8TBB5 520 aa12.52□□□□□ -0.41
HDAC6-226ENST00000483656 AK7Q96M32 723 aa12.52□□□□□ -0.41
HDAC6-226ENST00000483656 LRRCC1Q9C099 1032 aa12.52□□□□□ -0.41
HDAC6-226ENST00000483656 COPRSQ9NQ92 184 aa12.52□□□□□ -0.41
HDAC6-226ENST00000483656 TRMT112Q9UI30 125 aaKnown RBP12.52□□□□□ -0.41
HDAC6-226ENST00000483656 NIP7Q9Y221 180 aaKnown RBP eCLIP12.52□□□□□ -0.41
HDAC6-226ENST00000483656 SALL3Q9BXA9 1300 aa12.52□□□□□ -0.41
HDAC6-226ENST00000483656 UBR3Q6ZT12 1888 aa12.51□□□□□ -0.41
HDAC6-226ENST00000483656 NTSR2O95665 410 aa12.51□□□□□ -0.41
HDAC6-226ENST00000483656 PARP10Q53GL7 1025 aa12.51□□□□□ -0.41
HDAC6-226ENST00000483656 TRAPPC3LQ5T215 181 aa12.51□□□□□ -0.41
HDAC6-226ENST00000483656 TBC1D9BQ66K14 1250 aa12.51□□□□□ -0.41
HDAC6-226ENST00000483656 RHPN1Q8TCX5 695 aa12.51□□□□□ -0.41
HDAC6-226ENST00000483656 UTP14AQ9BVJ6 771 aaKnown RBP12.51□□□□□ -0.41
HDAC6-226ENST00000483656 ZNF652Q9Y2D9 606 aa12.51□□□□□ -0.41
HDAC6-226ENST00000483656 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-226ENST00000483656 IRS4O14654 1257 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-226ENST00000483656 PHF14O94880 888 aa12.5□□□□□ -0.41
HDAC6-226ENST00000483656 SASH1O94885 1247 aa12.5□□□□□ -0.41
HDAC6-226ENST00000483656 C8orf34Q49A92 452 aa12.5□□□□□ -0.41
HDAC6-226ENST00000483656 HSP90AB4PQ58FF6 505 aa12.5□□□□□ -0.41
HDAC6-226ENST00000483656 AKT1S1Q96B36 256 aa12.5□□□□□ -0.41
HDAC6-226ENST00000483656 KIF1BPQ96EK5 621 aa12.5□□□□□ -0.41
HDAC6-226ENST00000483656 BACH2Q9BYV9 841 aa12.5□□□□□ -0.41
HDAC6-226ENST00000483656 IL1RAPL2Q9NP60 686 aa12.5□□□□□ -0.41
HDAC6-226ENST00000483656 USP42Q9H9J4 1324 aaKnown RBP12.5□□□□□ -0.41
HDAC6-226ENST00000483656 C4AP0C0L4 1744 aa12.5□□□□□ -0.41
HDAC6-226ENST00000483656 SH3TC1Q8TE82 1336 aa12.49□□□□□ -0.41
HDAC6-226ENST00000483656 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.49□□□□□ -0.41
HDAC6-226ENST00000483656 FAM177BA6PVY3 158 aa12.49□□□□□ -0.41
HDAC6-226ENST00000483656 ZPR1O75312 459 aa12.49□□□□□ -0.41
HDAC6-226ENST00000483656 ADRA2BP18089 450 aa12.49□□□□□ -0.41
HDAC6-226ENST00000483656 ZNF827Q17R98 1081 aa12.49□□□□□ -0.41
HDAC6-226ENST00000483656 TTLL11Q8NHH1 800 aa12.49□□□□□ -0.41
HDAC6-226ENST00000483656 PDE8AO60658 829 aa12.48□□□□□ -0.41
HDAC6-226ENST00000483656 HCLS1P14317 486 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-226ENST00000483656 SSFA2P28290 1259 aa12.48□□□□□ -0.41
HDAC6-226ENST00000483656 RFC4P35249 363 aa12.48□□□□□ -0.41
HDAC6-226ENST00000483656 G3BP1Q13283 466 aaKnown RBP eCLIP12.48□□□□□ -0.418e-6■□□□□ 9
HDAC6-226ENST00000483656 FAM161AQ3B820 660 aa12.48□□□□□ -0.41
HDAC6-226ENST00000483656 CAMKK2Q96RR4 588 aa12.48□□□□□ -0.41
HDAC6-226ENST00000483656 BCL11AQ9H165 835 aa12.48□□□□□ -0.41
HDAC6-226ENST00000483656 SIL1Q9H173 461 aa12.48□□□□□ -0.41
HDAC6-226ENST00000483656 OSBPL3Q9H4L5 887 aa12.48□□□□□ -0.41
HDAC6-226ENST00000483656 ZBTB47Q9UFB7 747 aaPredicted RBP12.48□□□□□ -0.41
HDAC6-226ENST00000483656 GSPT1P15170 499 aaKnown RBP12.47□□□□□ -0.41
HDAC6-226ENST00000483656 PDE1AP54750 535 aa12.47□□□□□ -0.41
HDAC6-226ENST00000483656 CTSWP56202 376 aa12.47□□□□□ -0.41
HDAC6-226ENST00000483656 OS9Q13438 667 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-226ENST00000483656 IFFO2Q5TF58 517 aa12.47□□□□□ -0.41
HDAC6-226ENST00000483656 BICDL1Q6ZP65 573 aa12.47□□□□□ -0.41
HDAC6-226ENST00000483656 ATG9AQ7Z3C6 839 aa12.47□□□□□ -0.41
HDAC6-226ENST00000483656 NUTM1Q86Y26 1132 aa12.47□□□□□ -0.41
HDAC6-226ENST00000483656 ERC1Q8IUD2 1116 aa12.47□□□□□ -0.41
HDAC6-226ENST00000483656 ZNF594Q96JF6 807 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-226ENST00000483656 CCDC85AQ96PX6 553 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-226ENST00000483656 STAP2Q9UGK3 403 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms