RNA–Protein interactions for RNA: ENST00000483020.5

TSC2-213, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-213ENST00000483020 TAF7Q15545 349 aaPredicted RBP17.43■□□□□ 0.38
TSC2-213ENST00000483020 GPC2Q8N158 579 aa17.43■□□□□ 0.38
TSC2-213ENST00000483020 SYNE4Q8N205 404 aa17.43■□□□□ 0.38
TSC2-213ENST00000483020 RUNDC1Q96C34 613 aa17.43■□□□□ 0.38
TSC2-213ENST00000483020 NIP7Q9Y221 180 aaKnown RBP eCLIP17.43■□□□□ 0.38
TSC2-213ENST00000483020 NUP98P52948 1817 aa17.42■□□□□ 0.38
TSC2-213ENST00000483020 TPTE2Q6XPS3 522 aa17.42■□□□□ 0.38
TSC2-213ENST00000483020 TMPOP42166 694 aaKnown RBP17.41■□□□□ 0.38
TSC2-213ENST00000483020 RIPK4P57078 832 aa17.41■□□□□ 0.38
TSC2-213ENST00000483020 DDX21Q9NR30 783 aaKnown RBP eCLIP17.41■□□□□ 0.38
TSC2-213ENST00000483020 ABCC12Q96J65 1359 aa17.4■□□□□ 0.38
TSC2-213ENST00000483020 NBPF26B4DH59 902 aa17.4■□□□□ 0.38
TSC2-213ENST00000483020 SNRPA1P09661 255 aaKnown RBP17.4■□□□□ 0.38
TSC2-213ENST00000483020 ALDH1B1P30837 517 aa17.4■□□□□ 0.38
TSC2-213ENST00000483020 FMR1Q06787 632 aaKnown RBP eCLIP17.4■□□□□ 0.38
TSC2-213ENST00000483020 NBPF10Q6P3W6 841 aaKnown RBP17.4■□□□□ 0.38
TSC2-213ENST00000483020 NBPF15Q8N660 670 aa17.4■□□□□ 0.38
TSC2-213ENST00000483020 PSMD1Q99460 953 aa17.4■□□□□ 0.38
TSC2-213ENST00000483020 RGL2O15211 777 aa17.39■□□□□ 0.37
TSC2-213ENST00000483020 HLFQ16534 295 aa17.39■□□□□ 0.37
TSC2-213ENST00000483020 CCDC146Q8IYE0 955 aa17.39■□□□□ 0.37
TSC2-213ENST00000483020 PNISRQ8TF01 805 aaKnown RBP17.39■□□□□ 0.37
TSC2-213ENST00000483020 JDP2Q8WYK2 163 aa17.39■□□□□ 0.37
TSC2-213ENST00000483020 GJA3Q9Y6H8 435 aa17.39■□□□□ 0.37
TSC2-213ENST00000483020 LMOD3Q0VAK6 560 aa17.38■□□□□ 0.37
TSC2-213ENST00000483020 CCDC184Q52MB2 194 aa17.38■□□□□ 0.37
TSC2-213ENST00000483020 PAXIP1Q6ZW49 1069 aaPredicted RBP17.38■□□□□ 0.37
TSC2-213ENST00000483020 CAPNS2Q96L46 248 aa17.38■□□□□ 0.37
TSC2-213ENST00000483020 LMOD1P29536 600 aaPredicted RBP17.37■□□□□ 0.37
TSC2-213ENST00000483020 SCNN1DP51172 638 aa17.37■□□□□ 0.37
TSC2-213ENST00000483020 EIF6P56537 245 aaKnown RBP17.37■□□□□ 0.37
TSC2-213ENST00000483020 CRY2Q49AN0 593 aa17.37■□□□□ 0.37
TSC2-213ENST00000483020 CYP4F22Q6NT55 531 aa17.37■□□□□ 0.37
TSC2-213ENST00000483020 GTF2E1P29083 439 aaPredicted RBP17.36■□□□□ 0.37
TSC2-213ENST00000483020 EPS15P42566 896 aa17.36■□□□□ 0.37
TSC2-213ENST00000483020 GRM1Q13255 1194 aa17.36■□□□□ 0.37
TSC2-213ENST00000483020 SLC51AQ86UW1 340 aa17.36■□□□□ 0.37
TSC2-213ENST00000483020 CASP8AP2Q9UKL3 1982 aa17.35■□□□□ 0.37
TSC2-213ENST00000483020 CCDC85CA6NKD9 419 aa17.35■□□□□ 0.37
TSC2-213ENST00000483020 TRAF5O00463 557 aa17.35■□□□□ 0.37
TSC2-213ENST00000483020 NUTM1Q86Y26 1132 aa17.35■□□□□ 0.37
TSC2-213ENST00000483020 THUMPD2Q9BTF0 503 aaKnown RBP17.35■□□□□ 0.37
TSC2-213ENST00000483020 BEGAINQ9BUH8 593 aa17.35■□□□□ 0.37
TSC2-213ENST00000483020 BABAM1Q9NWV8 329 aa17.35■□□□□ 0.37
TSC2-213ENST00000483020 MIS18AQ9NYP9 233 aa17.35■□□□□ 0.37
TSC2-213ENST00000483020 KDM3BQ7LBC6 1761 aa17.35■□□□□ 0.37
TSC2-213ENST00000483020 ECE1P42892 770 aa17.34■□□□□ 0.37
TSC2-213ENST00000483020 MLLT1Q03111 559 aaPredicted RBP17.34■□□□□ 0.37
TSC2-213ENST00000483020 NEUROD2Q15784 382 aa17.34■□□□□ 0.37
TSC2-213ENST00000483020 RIC1Q4ADV7 1423 aa17.34■□□□□ 0.37
TSC2-213ENST00000483020 CST9Q5W186 159 aa17.34■□□□□ 0.37
TSC2-213ENST00000483020 GPR101Q96P66 508 aaPredicted RBP17.34■□□□□ 0.37
TSC2-213ENST00000483020 TSKSQ9UJT2 592 aa17.34■□□□□ 0.37
TSC2-213ENST00000483020 RRP7AQ9Y3A4 280 aaKnown RBP17.34■□□□□ 0.37
TSC2-213ENST00000483020 DLG5Q8TDM6 1919 aa17.33■□□□□ 0.37
TSC2-213ENST00000483020 CC2D2BQ6DHV5 1058 aa17.33■□□□□ 0.36
TSC2-213ENST00000483020 LARGE2Q8N3Y3 721 aa17.33■□□□□ 0.36
TSC2-213ENST00000483020 NYXQ9GZU5 481 aa17.33■□□□□ 0.36
TSC2-213ENST00000483020 MRS2Q9HD23 443 aa17.33■□□□□ 0.36
TSC2-213ENST00000483020 TRIM35Q9UPQ4 493 aa17.33■□□□□ 0.36
TSC2-213ENST00000483020 TLL2Q9Y6L7 1015 aa17.33■□□□□ 0.36
TSC2-213ENST00000483020 RGS19P49795 217 aa17.32■□□□□ 0.36
TSC2-213ENST00000483020 USP50Q70EL3 339 aaPredicted RBP17.32■□□□□ 0.36
TSC2-213ENST00000483020 RPGRQ92834 1020 aaKnown RBP17.32■□□□□ 0.36
TSC2-213ENST00000483020 APAF1O14727 1248 aa17.31■□□□□ 0.36
TSC2-213ENST00000483020 TNRC18O15417 2968 aaPredicted RBP17.31■□□□□ 0.36
TSC2-213ENST00000483020 AOC2O75106 756 aa17.31■□□□□ 0.36
TSC2-213ENST00000483020 HOXA10P31260 410 aaPredicted RBP17.31■□□□□ 0.36
TSC2-213ENST00000483020 EIF4A1P60842 406 aaKnown RBP17.31■□□□□ 0.36
TSC2-213ENST00000483020 IBTKQ9P2D0 1353 aaPredicted RBP17.3■□□□□ 0.36
TSC2-213ENST00000483020 UBN2Q6ZU65 1347 aa17.3■□□□□ 0.36
TSC2-213ENST00000483020 PPEF1O14829 653 aaPredicted RBP17.3■□□□□ 0.36
TSC2-213ENST00000483020 NGEFQ8N5V2 710 aa17.3■□□□□ 0.36
TSC2-213ENST00000483020 MAP3K15Q6ZN16 1313 aa17.29■□□□□ 0.36
TSC2-213ENST00000483020 ERVV-1B6SEH8 477 aa17.29■□□□□ 0.36
TSC2-213ENST00000483020 TCERG1O14776 1098 aaKnown RBP17.29■□□□□ 0.36
TSC2-213ENST00000483020 NIM1KQ8IY84 436 aa17.29■□□□□ 0.36
TSC2-213ENST00000483020 TSPYL4Q9UJ04 414 aa17.29■□□□□ 0.36
TSC2-213ENST00000483020 LAMB2P55268 1798 aa17.29■□□□□ 0.36
TSC2-213ENST00000483020 CHL1O00533 1208 aa17.28■□□□□ 0.36
TSC2-213ENST00000483020 PPIP5K2O43314 1243 aa17.28■□□□□ 0.36
TSC2-213ENST00000483020 GPTP24298 496 aa17.28■□□□□ 0.36
TSC2-213ENST00000483020 MAP2K2P36507 400 aa17.28■□□□□ 0.36
TSC2-213ENST00000483020 GRIPAP1Q4V328 841 aa17.28■□□□□ 0.36
TSC2-213ENST00000483020 TTLL7Q6ZT98 887 aa17.28■□□□□ 0.36
TSC2-213ENST00000483020 ADARB2Q9NS39 739 aaKnown RBP17.28■□□□□ 0.36
TSC2-213ENST00000483020 PDE4DIPQ5VU43 2346 aa17.27■□□□□ 0.36
TSC2-213ENST00000483020 CELF2O95319 508 aaKnown RBP17.27■□□□□ 0.36
TSC2-213ENST00000483020 AOC3Q16853 763 aa17.27■□□□□ 0.36
TSC2-213ENST00000483020 SUSD4Q5VX71 490 aa17.27■□□□□ 0.36
TSC2-213ENST00000483020 C3orf67Q6ZVT6 689 aa17.27■□□□□ 0.36
TSC2-213ENST00000483020 SAPCD2Q86UD0 394 aa17.27■□□□□ 0.36
TSC2-213ENST00000483020 RBM17Q96I25 401 aaKnown RBP17.27■□□□□ 0.36
TSC2-213ENST00000483020 CRAMP1Q96RY5 1269 aa17.27■□□□□ 0.36
TSC2-213ENST00000483020 MCOLN1Q9GZU1 580 aa17.27■□□□□ 0.36
TSC2-213ENST00000483020 GPRC5DQ9NZD1 345 aa17.27■□□□□ 0.36
TSC2-213ENST00000483020 NTSR2O95665 410 aa17.26■□□□□ 0.35
TSC2-213ENST00000483020 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
TSC2-213ENST00000483020 KIF6Q6ZMV9 814 aa17.26■□□□□ 0.35
TSC2-213ENST00000483020 ZBTB3Q9H5J0 574 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms