RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 RARSP54136 660 aaKnown RBP21.34■■□□□ 1.01
SF1-215ENST00000482693 BRPF1P55201 1214 aaPredicted RBP21.34■■□□□ 1.01
SF1-215ENST00000482693 NUTM1Q86Y26 1132 aa21.34■■□□□ 1.01
SF1-215ENST00000482693 C2CD5Q86YS7 1000 aa21.34■■□□□ 1.01
SF1-215ENST00000482693 PTPRCP08575 1304 aa21.33■■□□□ 1.01
SF1-215ENST00000482693 KLRG2A4D1S0 409 aaPredicted RBP21.33■■□□□ 1.01
SF1-215ENST00000482693 KCNA3P22001 575 aa21.33■■□□□ 1.01
SF1-215ENST00000482693 SLC10A5Q5PT55 438 aa21.33■■□□□ 1.01
SF1-215ENST00000482693 SH3TC1Q8TE82 1336 aa21.32■■□□□ 1
SF1-215ENST00000482693 CHRNA5P30532 468 aa21.32■■□□□ 1
SF1-215ENST00000482693 BCL2L13Q9BXK5 485 aa21.32■■□□□ 1
SF1-215ENST00000482693 CWC25Q9NXE8 425 aaPredicted RBP21.32■■□□□ 1
SF1-215ENST00000482693 PIM2Q9P1W9 311 aa21.32■■□□□ 1
SF1-215ENST00000482693 ARFGEF2Q9Y6D5 1785 aa21.32■■□□□ 1
SF1-215ENST00000482693 IGKV5-2P06315 115 aa21.31■■□□□ 1
SF1-215ENST00000482693 LINS1Q8NG48 757 aa21.31■■□□□ 1
SF1-215ENST00000482693 ANKRD36CQ5JPF3 1778 aa21.31■■□□□ 1
SF1-215ENST00000482693 RIC1Q4ADV7 1423 aa21.3■■□□□ 1
SF1-215ENST00000482693 GPR162Q16538 588 aa21.3■■□□□ 1
SF1-215ENST00000482693 ZBTB38Q8NAP3 1195 aaPredicted RBP21.3■■□□□ 1
SF1-215ENST00000482693 ABCC12Q96J65 1359 aa21.29■■□□□ 1
SF1-215ENST00000482693 NEURL1BA8MQ27 555 aa21.29■■□□□ 1
SF1-215ENST00000482693 F6X3S4 739 aa21.29■■□□□ 1
SF1-215ENST00000482693 SRGNP10124 158 aa21.29■■□□□ 1
SF1-215ENST00000482693 HSP90B1P14625 803 aaKnown RBP21.29■■□□□ 1
SF1-215ENST00000482693 FAM89AQ96GI7 184 aa21.29■■□□□ 1
SF1-215ENST00000482693 PCCAP05165 728 aaPredicted RBP21.28■■□□□ 1
SF1-215ENST00000482693 CWF19L2Q2TBE0 894 aaKnown RBP21.28■■□□□ 1
SF1-215ENST00000482693 DALRD3Q5D0E6 543 aaKnown RBP21.28■■□□□ 1
SF1-215ENST00000482693 STYK1Q6J9G0 422 aa21.28■■□□□ 1
SF1-215ENST00000482693 PELP1Q8IZL8 1130 aaKnown RBP21.28■■□□□ 1
SF1-215ENST00000482693 MASTLQ96GX5 879 aa21.28■■□□□ 1
SF1-215ENST00000482693 NLRP3Q96P20 1036 aa21.28■■□□□ 1
SF1-215ENST00000482693 NOB1Q9ULX3 412 aaKnown RBP21.28■■□□□ 1
SF1-215ENST00000482693 KIAA1551Q9HCM1 1747 aa21.27■■□□□ 1
SF1-215ENST00000482693 NPR1P16066 1061 aa21.27■■□□□ 1
SF1-215ENST00000482693 CRY2Q49AN0 593 aa21.27■■□□□ 1
SF1-215ENST00000482693 BEND3Q5T5X7 828 aa21.27■■□□□ 1
SF1-215ENST00000482693 SYNE4Q8N205 404 aa21.27■■□□□ 1
SF1-215ENST00000482693 YTHDC1Q96MU7 727 aaKnown RBP21.27■■□□□ 1
SF1-215ENST00000482693 KIF16BQ96L93 1317 aa21.27■□□□□ 0.99
SF1-215ENST00000482693 GRIN3BO60391 1043 aa21.26■□□□□ 0.99
SF1-215ENST00000482693 HCLS1P14317 486 aaPredicted RBP21.26■□□□□ 0.99
SF1-215ENST00000482693 GCKRQ14397 625 aa21.26■□□□□ 0.99
SF1-215ENST00000482693 TTLL6Q8N841 843 aa21.26■□□□□ 0.99
SF1-215ENST00000482693 ARHGAP45Q92619 1136 aa21.26■□□□□ 0.99
SF1-215ENST00000482693 ZNF622Q969S3 477 aaKnown RBP eCLIP21.26■□□□□ 0.997e-15■■□□□ 11.5
SF1-215ENST00000482693 IPO8O15397 1037 aaKnown RBP21.25■□□□□ 0.99
SF1-215ENST00000482693 ALDH1L1O75891 902 aa21.25■□□□□ 0.99
SF1-215ENST00000482693 YBX3P16989 372 aaKnown RBP eCLIP21.25■□□□□ 0.991e-8■□□□□ 9
SF1-215ENST00000482693 SLC4A10Q6U841 1118 aa21.25■□□□□ 0.99
SF1-215ENST00000482693 ANKRD31Q8N7Z5 1873 aa21.25■□□□□ 0.99
SF1-215ENST00000482693 CNKSR1Q969H4 720 aa21.25■□□□□ 0.99
SF1-215ENST00000482693 API5Q9BZZ5 524 aaKnown RBP21.25■□□□□ 0.99
SF1-215ENST00000482693 BCS1LQ9Y276 419 aa21.25■□□□□ 0.99
SF1-215ENST00000482693 N4BP2Q86UW6 1770 aaPredicted RBP21.25■□□□□ 0.99
SF1-215ENST00000482693 H7C1W4 665 aa21.24■□□□□ 0.99
SF1-215ENST00000482693 IRS4O14654 1257 aaPredicted RBP21.24■□□□□ 0.99
SF1-215ENST00000482693 BCAR3O75815 825 aa21.24■□□□□ 0.99
SF1-215ENST00000482693 HOXA10P31260 410 aaPredicted RBP21.24■□□□□ 0.99
SF1-215ENST00000482693 RTL5Q5HYW3 569 aaPredicted RBP21.24■□□□□ 0.99
SF1-215ENST00000482693 RPGRQ92834 1020 aaKnown RBP21.24■□□□□ 0.99
SF1-215ENST00000482693 SRCIN1Q9C0H9 1055 aa21.24■□□□□ 0.99
SF1-215ENST00000482693 ALDH1B1P30837 517 aa21.23■□□□□ 0.99
SF1-215ENST00000482693 WWC3Q9ULE0 1092 aa21.23■□□□□ 0.99
SF1-215ENST00000482693 CDHR2Q9BYE9 1310 aa21.23■□□□□ 0.99
SF1-215ENST00000482693 C3orf67Q6ZVT6 689 aa21.22■□□□□ 0.99
SF1-215ENST00000482693 RBM17Q96I25 401 aaKnown RBP21.22■□□□□ 0.99
SF1-215ENST00000482693 CRAMP1Q96RY5 1269 aa21.21■□□□□ 0.99
SF1-215ENST00000482693 PDE8AO60658 829 aa21.2■□□□□ 0.98
SF1-215ENST00000482693 SF3B3Q15393 1217 aaKnown RBP21.2■□□□□ 0.98
SF1-215ENST00000482693 UBE3BQ7Z3V4 1068 aa21.2■□□□□ 0.98
SF1-215ENST00000482693 JARID2Q92833 1246 aaPredicted RBP21.2■□□□□ 0.98
SF1-215ENST00000482693 CCT4P50991 539 aaKnown RBP21.19■□□□□ 0.98
SF1-215ENST00000482693 PRPF40BQ6NWY9 871 aaKnown RBP21.19■□□□□ 0.98
SF1-215ENST00000482693 FRAT1Q92837 279 aaPredicted RBP21.19■□□□□ 0.98
SF1-215ENST00000482693 DLEC1Q9Y238 1755 aa21.18■□□□□ 0.98
SF1-215ENST00000482693 GRM8O00222 908 aa21.18■□□□□ 0.98
SF1-215ENST00000482693 CASP7P55210 303 aa21.18■□□□□ 0.98
SF1-215ENST00000482693 ATF7IPQ6VMQ6 1270 aa21.18■□□□□ 0.98
SF1-215ENST00000482693 C9orf78Q9NZ63 289 aaPredicted RBP21.18■□□□□ 0.98
SF1-215ENST00000482693 TNRC6CQ9HCJ0 1690 aaKnown RBP21.18■□□□□ 0.98
SF1-215ENST00000482693 ZKSCAN2Q63HK3 967 aa21.17■□□□□ 0.98
SF1-215ENST00000482693 DDX46Q7L014 1031 aaKnown RBP21.17■□□□□ 0.98
SF1-215ENST00000482693 PLA2G12BQ9BX93 195 aa21.17■□□□□ 0.98
SF1-215ENST00000482693 RCAN3Q9UKA8 241 aa21.17■□□□□ 0.98
SF1-215ENST00000482693 COL11A2P13942 1736 aaPredicted RBP21.17■□□□□ 0.98
SF1-215ENST00000482693 BRCA1P38398 1863 aaKnown RBP21.16■□□□□ 0.98
SF1-215ENST00000482693 SOGA3Q5TF21 947 aa21.16■□□□□ 0.98
SF1-215ENST00000482693 BBOX1O75936 387 aa21.15■□□□□ 0.98
SF1-215ENST00000482693 TRIM27P14373 513 aa21.15■□□□□ 0.98
SF1-215ENST00000482693 CCDC152Q4G0S7 254 aa21.15■□□□□ 0.98
SF1-215ENST00000482693 ARHGAP27Q6ZUM4 889 aa21.15■□□□□ 0.98
SF1-215ENST00000482693 C7orf43Q8WVR3 580 aa21.15■□□□□ 0.98
SF1-215ENST00000482693 UTYO14607 1347 aa21.14■□□□□ 0.97
SF1-215ENST00000482693 ABCC4O15439 1325 aa21.14■□□□□ 0.97
SF1-215ENST00000482693 C21orf2O43822 256 aa21.14■□□□□ 0.97
SF1-215ENST00000482693 CTSWP56202 376 aa21.14■□□□□ 0.97
SF1-215ENST00000482693 INTS3Q68E01 1043 aaKnown RBP21.14■□□□□ 0.97
SF1-215ENST00000482693 DDX60Q8IY21 1712 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms