RNA–Protein interactions for RNA: ENST00000481655.2

CTCFL-210, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 1,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-210ENST00000481655 USP44Q9H0E7 712 aa18.74■□□□□ 0.59
CTCFL-210ENST00000481655 SCN7AQ01118 1682 aa18.74■□□□□ 0.59
CTCFL-210ENST00000481655 HSP90B1P14625 803 aaKnown RBP18.73■□□□□ 0.59
CTCFL-210ENST00000481655 UTP14AQ9BVJ6 771 aaKnown RBP18.73■□□□□ 0.59
CTCFL-210ENST00000481655 NYXQ9GZU5 481 aa18.73■□□□□ 0.59
CTCFL-210ENST00000481655 TRMT112Q9UI30 125 aaKnown RBP18.73■□□□□ 0.59
CTCFL-210ENST00000481655 UTYO14607 1347 aa18.72■□□□□ 0.59
CTCFL-210ENST00000481655 TBC1D9BQ66K14 1250 aa18.72■□□□□ 0.59
CTCFL-210ENST00000481655 BICDL1Q6ZP65 573 aa18.72■□□□□ 0.59
CTCFL-210ENST00000481655 BCORQ6W2J9 1755 aa18.72■□□□□ 0.59
CTCFL-210ENST00000481655 CARMIL3Q8ND23 1372 aa18.71■□□□□ 0.59
CTCFL-210ENST00000481655 N4BP2Q86UW6 1770 aaPredicted RBP18.71■□□□□ 0.59
CTCFL-210ENST00000481655 UBN2Q6ZU65 1347 aa18.71■□□□□ 0.59
CTCFL-210ENST00000481655 PCCAP05165 728 aaPredicted RBP18.71■□□□□ 0.59
CTCFL-210ENST00000481655 ZBTB38Q8NAP3 1195 aaPredicted RBP18.71■□□□□ 0.59
CTCFL-210ENST00000481655 C4AP0C0L4 1744 aa18.71■□□□□ 0.59
CTCFL-210ENST00000481655 NBPF7P0C2Y1 421 aaPredicted RBP18.7■□□□□ 0.58
CTCFL-210ENST00000481655 GTF2E1P29083 439 aaPredicted RBP18.7■□□□□ 0.58
CTCFL-210ENST00000481655 UBE3BQ7Z3V4 1068 aa18.7■□□□□ 0.58
CTCFL-210ENST00000481655 SLC16A10Q8TF71 515 aa18.7■□□□□ 0.58
CTCFL-210ENST00000481655 GTF3C3Q9Y5Q9 886 aa18.7■□□□□ 0.58
CTCFL-210ENST00000481655 SH3TC1Q8TE82 1336 aa18.7■□□□□ 0.58
CTCFL-210ENST00000481655 H7C1W4 665 aa18.69■□□□□ 0.58
CTCFL-210ENST00000481655 NPHP1O15259 732 aa18.69■□□□□ 0.58
CTCFL-210ENST00000481655 NFIXQ14938 502 aa18.69■□□□□ 0.58
CTCFL-210ENST00000481655 NBPF5PQ86XG9 351 aaPredicted RBP18.69■□□□□ 0.58
CTCFL-210ENST00000481655 SUSD4Q5VX71 490 aa18.69■□□□□ 0.58
CTCFL-210ENST00000481655 TPTE2Q6XPS3 522 aa18.69■□□□□ 0.58
CTCFL-210ENST00000481655 FAM177BA6PVY3 158 aa18.68■□□□□ 0.58
CTCFL-210ENST00000481655 PPP4R2Q9NY27 417 aa18.68■□□□□ 0.58
CTCFL-210ENST00000481655 LRRFIP2Q9Y608 721 aaKnown RBP18.68■□□□□ 0.58
CTCFL-210ENST00000481655 NUP98P52948 1817 aa18.67■□□□□ 0.58
CTCFL-210ENST00000481655 CDHR2Q9BYE9 1310 aa18.67■□□□□ 0.58
CTCFL-210ENST00000481655 RTL5Q5HYW3 569 aaPredicted RBP18.67■□□□□ 0.58
CTCFL-210ENST00000481655 FAM89AQ96GI7 184 aa18.67■□□□□ 0.58
CTCFL-210ENST00000481655 C1orf115Q9H7X2 142 aa18.67■□□□□ 0.58
CTCFL-210ENST00000481655 QSER1Q2KHR3 1735 aa18.67■□□□□ 0.58
CTCFL-210ENST00000481655 ANKRD36CQ5JPF3 1778 aa18.67■□□□□ 0.58
CTCFL-210ENST00000481655 NTSR2O95665 410 aa18.66■□□□□ 0.58
CTCFL-210ENST00000481655 TM4SF1P30408 202 aa18.66■□□□□ 0.58
CTCFL-210ENST00000481655 RPAP2Q8IXW5 612 aaPredicted RBP18.66■□□□□ 0.58
CTCFL-210ENST00000481655 IRS4O14654 1257 aaPredicted RBP18.65■□□□□ 0.58
CTCFL-210ENST00000481655 HMMRO75330 724 aa18.65■□□□□ 0.58
CTCFL-210ENST00000481655 CASP7P55210 303 aa18.65■□□□□ 0.58
CTCFL-210ENST00000481655 R3HDM1Q15032 1099 aaKnown RBP18.65■□□□□ 0.58
CTCFL-210ENST00000481655 CNBD1Q8NA66 436 aa18.65■□□□□ 0.58
CTCFL-210ENST00000481655 PARP3Q9Y6F1 533 aa18.65■□□□□ 0.58
CTCFL-210ENST00000481655 TUBGCP6Q96RT7 1819 aa18.65■□□□□ 0.58
CTCFL-210ENST00000481655 JARID2Q92833 1246 aaPredicted RBP18.64■□□□□ 0.58
CTCFL-210ENST00000481655 SUCLG2Q96I99 432 aa18.64■□□□□ 0.58
CTCFL-210ENST00000481655 CCDC136Q96JN2 1154 aa18.64■□□□□ 0.58
CTCFL-210ENST00000481655 AFDNP55196 1824 aaKnown RBP18.64■□□□□ 0.57
CTCFL-210ENST00000481655 ST5P78524 1137 aa18.64■□□□□ 0.57
CTCFL-210ENST00000481655 MSL1Q68DK7 614 aa18.64■□□□□ 0.57
CTCFL-210ENST00000481655 PLA2G12BQ9BX93 195 aa18.64■□□□□ 0.57
CTCFL-210ENST00000481655 PDE8AO60658 829 aa18.63■□□□□ 0.57
CTCFL-210ENST00000481655 SERPINB2P05120 415 aa18.63■□□□□ 0.57
CTCFL-210ENST00000481655 MMP10P09238 476 aa18.63■□□□□ 0.57
CTCFL-210ENST00000481655 CEP85Q6P2H3 762 aa18.63■□□□□ 0.57
CTCFL-210ENST00000481655 NUTM1Q86Y26 1132 aa18.63■□□□□ 0.57
CTCFL-210ENST00000481655 RWDD1Q9H446 243 aaPredicted RBP18.63■□□□□ 0.57
CTCFL-210ENST00000481655 BICC1Q9H694 974 aaKnown RBP18.63■□□□□ 0.57
CTCFL-210ENST00000481655 PCDHB15Q9Y5E8 787 aa18.63■□□□□ 0.57
CTCFL-210ENST00000481655 POLRMTO00411 1230 aaKnown RBP18.62■□□□□ 0.57
CTCFL-210ENST00000481655 ANKRD44Q8N8A2 993 aa18.62■□□□□ 0.57
CTCFL-210ENST00000481655 DDR1Q08345 913 aa18.61■□□□□ 0.57
CTCFL-210ENST00000481655 ERFEQ4G0M1 354 aa18.61■□□□□ 0.57
CTCFL-210ENST00000481655 SLC10A5Q5PT55 438 aa18.61■□□□□ 0.57
CTCFL-210ENST00000481655 MTFR1LQ9H019 292 aa18.61■□□□□ 0.57
CTCFL-210ENST00000481655 SRGAP3O43295 1099 aa18.6■□□□□ 0.57
CTCFL-210ENST00000481655 HCLS1P14317 486 aaPredicted RBP18.6■□□□□ 0.57
CTCFL-210ENST00000481655 ATP8B2P98198 1209 aa18.6■□□□□ 0.57
CTCFL-210ENST00000481655 MTX1Q13505 466 aa18.6■□□□□ 0.57
CTCFL-210ENST00000481655 RABL6Q3YEC7 729 aaPredicted RBP18.6■□□□□ 0.57
CTCFL-210ENST00000481655 KAZALD1Q96I82 304 aa18.6■□□□□ 0.57
CTCFL-210ENST00000481655 COL24A1Q17RW2 1714 aa18.59■□□□□ 0.57
CTCFL-210ENST00000481655 POLD1P28340 1107 aa18.59■□□□□ 0.57
CTCFL-210ENST00000481655 CTSWP56202 376 aa18.59■□□□□ 0.57
CTCFL-210ENST00000481655 HDAC1Q13547 482 aaPredicted RBP18.59■□□□□ 0.57
CTCFL-210ENST00000481655 PRR5LQ6MZQ0 368 aa18.59■□□□□ 0.57
CTCFL-210ENST00000481655 NLRP3Q96P20 1036 aa18.59■□□□□ 0.57
CTCFL-210ENST00000481655 PDGFDQ9GZP0 370 aaPredicted RBP18.59■□□□□ 0.57
CTCFL-210ENST00000481655 CHMP3Q9Y3E7 222 aa18.59■□□□□ 0.57
CTCFL-210ENST00000481655 FOXO4P98177 505 aa18.59■□□□□ 0.57
CTCFL-210ENST00000481655 CCDC152Q4G0S7 254 aa18.59■□□□□ 0.57
CTCFL-210ENST00000481655 LMBR1LQ6UX01 489 aa18.59■□□□□ 0.57
CTCFL-210ENST00000481655 SYNE4Q8N205 404 aa18.59■□□□□ 0.57
CTCFL-210ENST00000481655 PSDA5PKW4 1024 aaPredicted RBP18.58■□□□□ 0.56
CTCFL-210ENST00000481655 ZBTB7AO95365 584 aa18.58■□□□□ 0.56
CTCFL-210ENST00000481655 EPHA10Q5JZY3 1008 aa18.58■□□□□ 0.56
CTCFL-210ENST00000481655 CSF1RP07333 972 aa18.57■□□□□ 0.56
CTCFL-210ENST00000481655 CCDC57Q2TAC2 916 aa18.57■□□□□ 0.56
CTCFL-210ENST00000481655 RIC1Q4ADV7 1423 aa18.57■□□□□ 0.56
CTCFL-210ENST00000481655 B4GALNT3Q6L9W6 998 aa18.56■□□□□ 0.56
CTCFL-210ENST00000481655 TTLL11Q8NHH1 800 aa18.56■□□□□ 0.56
CTCFL-210ENST00000481655 SSH3Q8TE77 659 aa18.56■□□□□ 0.56
CTCFL-210ENST00000481655 ABCC12Q96J65 1359 aa18.56■□□□□ 0.56
CTCFL-210ENST00000481655 PNMA6EA0A0J9YXQ4 647 aa18.55■□□□□ 0.56
CTCFL-210ENST00000481655 IFIT5Q13325 482 aaKnown RBP18.55■□□□□ 0.56
CTCFL-210ENST00000481655 POLA2Q14181 598 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms