RNA–Protein interactions for RNA: ENST00000481168.1

RPN1-204, Transcript of ribophorin I, humanhuman

TSL 2

Gene RPN1, Length 751 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-204ENST00000481168 RGMBQ6NW40 437 aa17.32■□□□□ 0.36
RPN1-204ENST00000481168 GTF2E1P29083 439 aaPredicted RBP17.31■□□□□ 0.36
RPN1-204ENST00000481168 CLEC4GQ6UXB4 293 aa17.31■□□□□ 0.36
RPN1-204ENST00000481168 PGAP2Q9UHJ9 254 aa17.31■□□□□ 0.36
RPN1-204ENST00000481168 TIMELESSQ9UNS1 1208 aa17.31■□□□□ 0.36
RPN1-204ENST00000481168 ZNF652Q9Y2D9 606 aa17.31■□□□□ 0.36
RPN1-204ENST00000481168 FAM155AB1AL88 458 aaPredicted RBP17.3■□□□□ 0.36
RPN1-204ENST00000481168 GMPSP49915 693 aaPredicted RBP17.3■□□□□ 0.36
RPN1-204ENST00000481168 USP48Q86UV5 1035 aa17.3■□□□□ 0.36
RPN1-204ENST00000481168 ZC3H15Q8WU90 426 aaKnown RBP17.3■□□□□ 0.36
RPN1-204ENST00000481168 CCDC102AQ96A19 550 aa17.3■□□□□ 0.36
RPN1-204ENST00000481168 NIP7Q9Y221 180 aaKnown RBP eCLIP17.3■□□□□ 0.36
RPN1-204ENST00000481168 PPIP5K2O43314 1243 aa17.29■□□□□ 0.36
RPN1-204ENST00000481168 IL13P35225 146 aa17.29■□□□□ 0.36
RPN1-204ENST00000481168 PIP4K2AP48426 406 aaPredicted RBP17.29■□□□□ 0.36
RPN1-204ENST00000481168 MTHFSDQ2M296 383 aaKnown RBP17.29■□□□□ 0.36
RPN1-204ENST00000481168 ZNF790Q6PG37 636 aa17.29■□□□□ 0.36
RPN1-204ENST00000481168 POLR3GLQ9BT43 218 aa17.29■□□□□ 0.36
RPN1-204ENST00000481168 BCORQ6W2J9 1755 aa17.29■□□□□ 0.36
RPN1-204ENST00000481168 SNED1Q8TER0 1413 aa17.29■□□□□ 0.36
RPN1-204ENST00000481168 TCERG1O14776 1098 aaKnown RBP17.28■□□□□ 0.36
RPN1-204ENST00000481168 ZNF157P51786 506 aaPredicted RBP17.28■□□□□ 0.36
RPN1-204ENST00000481168 HIRAP54198 1017 aaPredicted RBP17.28■□□□□ 0.36
RPN1-204ENST00000481168 PKN2Q16513 984 aaKnown RBP17.28■□□□□ 0.36
RPN1-204ENST00000481168 DLK2Q6UY11 383 aa17.28■□□□□ 0.36
RPN1-204ENST00000481168 HDAC9Q9UKV0 1011 aa17.28■□□□□ 0.36
RPN1-204ENST00000481168 NPC1L1Q9UHC9 1359 aa17.28■□□□□ 0.36
RPN1-204ENST00000481168 HMOX1P09601 288 aa17.27■□□□□ 0.36
RPN1-204ENST00000481168 FXR1P51114 621 aaKnown RBP eCLIP17.27■□□□□ 0.36
RPN1-204ENST00000481168 CXCL9Q07325 125 aa17.27■□□□□ 0.36
RPN1-204ENST00000481168 GRIPAP1Q4V328 841 aa17.27■□□□□ 0.36
RPN1-204ENST00000481168 FMNL2Q96PY5 1086 aa17.27■□□□□ 0.36
RPN1-204ENST00000481168 BCL2L13Q9BXK5 485 aa17.27■□□□□ 0.36
RPN1-204ENST00000481168 TEFQ10587 303 aa17.26■□□□□ 0.35
RPN1-204ENST00000481168 AOC3Q16853 763 aa17.26■□□□□ 0.35
RPN1-204ENST00000481168 C2orf69Q8N8R5 385 aa17.26■□□□□ 0.35
RPN1-204ENST00000481168 TRPM4Q8TD43 1214 aa17.26■□□□□ 0.35
RPN1-204ENST00000481168 CSRNP1Q96S65 589 aa17.26■□□□□ 0.35
RPN1-204ENST00000481168 GBA2Q9HCG7 927 aaPredicted RBP17.26■□□□□ 0.35
RPN1-204ENST00000481168 UBR2Q8IWV8 1755 aa17.25■□□□□ 0.35
RPN1-204ENST00000481168 MORC1Q86VD1 984 aa17.25■□□□□ 0.35
RPN1-204ENST00000481168 RPGRQ92834 1020 aaKnown RBP17.25■□□□□ 0.35
RPN1-204ENST00000481168 ZNRF3Q9ULT6 936 aa17.25■□□□□ 0.35
RPN1-204ENST00000481168 CRY2Q49AN0 593 aa17.24■□□□□ 0.35
RPN1-204ENST00000481168 SLC51AQ86UW1 340 aa17.24■□□□□ 0.35
RPN1-204ENST00000481168 CCER1Q8TC90 406 aaPredicted RBP17.24■□□□□ 0.35
RPN1-204ENST00000481168 H7C1D1 291 aa17.22■□□□□ 0.35
RPN1-204ENST00000481168 DLL1O00548 723 aa17.22■□□□□ 0.35
RPN1-204ENST00000481168 PPEF1O14829 653 aaPredicted RBP17.22■□□□□ 0.35
RPN1-204ENST00000481168 TMX4Q9H1E5 349 aaPredicted RBP17.22■□□□□ 0.35
RPN1-204ENST00000481168 CNOT7Q9UIV1 285 aaKnown RBP17.22■□□□□ 0.35
RPN1-204ENST00000481168 USP16Q9Y5T5 823 aa17.22■□□□□ 0.35
RPN1-204ENST00000481168 RAD17O75943 681 aa17.21■□□□□ 0.35
RPN1-204ENST00000481168 KRT26Q7Z3Y9 468 aa17.21■□□□□ 0.35
RPN1-204ENST00000481168 NUTM1Q86Y26 1132 aa17.21■□□□□ 0.35
RPN1-204ENST00000481168 CDHR2Q9BYE9 1310 aa17.21■□□□□ 0.34
RPN1-204ENST00000481168 AKAP11Q9UKA4 1901 aa17.2■□□□□ 0.34
RPN1-204ENST00000481168 SHTN1A0MZ66 631 aa17.2■□□□□ 0.34
RPN1-204ENST00000481168 SLC10A3P09131 477 aa17.2■□□□□ 0.34
RPN1-204ENST00000481168 HOXA10P31260 410 aaPredicted RBP17.2■□□□□ 0.34
RPN1-204ENST00000481168 TNIP1Q15025 636 aa17.2■□□□□ 0.34
RPN1-204ENST00000481168 IL17REQ8NFR9 667 aa17.2■□□□□ 0.34
RPN1-204ENST00000481168 ZNF296Q8WUU4 475 aaPredicted RBP17.2■□□□□ 0.34
RPN1-204ENST00000481168 RBM17Q96I25 401 aaKnown RBP17.2■□□□□ 0.34
RPN1-204ENST00000481168 VPS33BQ9H267 617 aa17.2■□□□□ 0.34
RPN1-204ENST00000481168 MKI67P46013 3256 aaKnown RBP17.2■□□□□ 0.34
RPN1-204ENST00000481168 ABCC12Q96J65 1359 aa17.19■□□□□ 0.34
RPN1-204ENST00000481168 KCNQ3O43525 872 aa17.19■□□□□ 0.34
RPN1-204ENST00000481168 NYXQ9GZU5 481 aa17.19■□□□□ 0.34
RPN1-204ENST00000481168 TBC1D8O95759 1140 aa17.18■□□□□ 0.34
RPN1-204ENST00000481168 HLFQ16534 295 aa17.18■□□□□ 0.34
RPN1-204ENST00000481168 FBXO46Q6PJ61 603 aaPredicted RBP17.18■□□□□ 0.34
RPN1-204ENST00000481168 MICALL2Q8IY33 904 aa17.18■□□□□ 0.34
RPN1-204ENST00000481168 REM2Q8IYK8 340 aaPredicted RBP17.18■□□□□ 0.34
RPN1-204ENST00000481168 CRAMP1Q96RY5 1269 aa17.18■□□□□ 0.34
RPN1-204ENST00000481168 CUL9Q8IWT3 2517 aa17.17■□□□□ 0.34
RPN1-204ENST00000481168 ADM5C9JUS6 153 aa17.17■□□□□ 0.34
RPN1-204ENST00000481168 SUPT20HQ8NEM7 779 aa17.17■□□□□ 0.34
RPN1-204ENST00000481168 PANK3Q9H999 370 aa17.17■□□□□ 0.34
RPN1-204ENST00000481168 KIF7Q2M1P5 1343 aa17.17■□□□□ 0.34
RPN1-204ENST00000481168 TRIOBPQ9H2D6 2365 aa17.16■□□□□ 0.34
RPN1-204ENST00000481168 PRAMEF22A3QJZ6 481 aa17.16■□□□□ 0.34
RPN1-204ENST00000481168 BTBD11A6QL63 1104 aa17.16■□□□□ 0.34
RPN1-204ENST00000481168 GNAT3A8MTJ3 354 aa17.16■□□□□ 0.34
RPN1-204ENST00000481168 RGL2O15211 777 aa17.16■□□□□ 0.34
RPN1-204ENST00000481168 SAMD7Q7Z3H4 446 aa17.16■□□□□ 0.34
RPN1-204ENST00000481168 DCPSQ96C86 337 aaKnown RBP17.16■□□□□ 0.34
RPN1-204ENST00000481168 TBC1D10BQ4KMP7 808 aaPredicted RBP17.15■□□□□ 0.34
RPN1-204ENST00000481168 RBM26Q5T8P6 1007 aaKnown RBP17.14■□□□□ 0.33
RPN1-204ENST00000481168 COLQQ9Y215 455 aaPredicted RBP17.14■□□□□ 0.33
RPN1-204ENST00000481168 ZBTB12Q9Y330 459 aaPredicted RBP17.14■□□□□ 0.33
RPN1-204ENST00000481168 ATP6V0A2Q9Y487 856 aa17.14■□□□□ 0.33
RPN1-204ENST00000481168 CEP290O15078 2479 aa17.13■□□□□ 0.33
RPN1-204ENST00000481168 NBPF26B4DH59 902 aa17.13■□□□□ 0.33
RPN1-204ENST00000481168 SNRPA1P09661 255 aaKnown RBP17.13■□□□□ 0.33
RPN1-204ENST00000481168 NBPF10Q6P3W6 841 aaKnown RBP17.13■□□□□ 0.33
RPN1-204ENST00000481168 DPP8Q6V1X1 898 aaPredicted RBP17.13■□□□□ 0.33
RPN1-204ENST00000481168 RASAL3Q86YV0 1011 aa17.13■□□□□ 0.33
RPN1-204ENST00000481168 SLC17A8Q8NDX2 589 aa17.13■□□□□ 0.33
RPN1-204ENST00000481168 A0A0C4DFX4 3053 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms